LOC110495028 (LOC106593387)


Basic Information

Item Value
gene id LOC110495028
gene name LOC106593387
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 8964809 ~ 8984789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948812.1
ATGAGTACGGACGCGGAGATGCAAATCTACGGCAAGGCTGCCATATACCTCCGTAAGCCTGAGAGGGAAAGGATTGAGGCACAAACCGCACCCTTTGATTCAAAGAACTCCTGCTATGTGACAGACAAGGTGGAGCTGTACCTTAAGGGTTTAGTCACTGCCAGGGCCGACGGGAAGTGTACTGTAACAGTCACGAAACCTGACGGCACTAAGGAGGAAGGAAAAGAGTTCAAAGATGCAGACATCTATGAGATGAACCCCCCTAAGTACGACAAGATTGAGGACATGGCCATGATGACCTACCTGAATGAAGCCTCTGTGTTGTATAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCGGGGCTCTTCTGTGCCACGGTGAACCCCTACAAGTGGCTCCCTGTGTACGACGCAGAGGTTGTCAACGCCtacagagggaagaagaggatggAGGCTCCACCCCATATCTTCTCCGTCTCTGACAACGCCTTTCAGTTCATGATGATTGataaggAGAACCAGTCCGTCCTGATTACCGGAGAATCCGGTGCAGGAAAGACTGTCAACACCAAGCGTGTCATCCAGTACTTTGCCACCATTGCAGTGTCTGGGGCCAAGAAGGAAGCAGAACCTGGCAAAATGCAGGGGTCTCTTGAGGATCAGATCATTGCAGCTAACCCTCTGCTGGAGTCTTACGGTAATGCCAAGACAGTGAGGAACGACAACTCGTCTCGCTTTGGTAAATTCATCAGGATTCACTTCCAAGCTGGTAAACTGGCTAAAGCTGACATTGAAACCTacCTGCTGGAGAAGTCCAGAGTCTCCTTCCAGCTGCCCGATGAGAGAGGCTACCACATCTTCTTCCAGATGATGACAGGCCACAAACCTGAGCTAGTTGAAATGGCGCTCATCACCACCAACCCCTACGACTTCCCCATGTGCAGCCAGGGTCAGATCACCGTGGCAAGCATCAACGACAATGAAGAGTTGGATGCCACAGATGATGCCATTACCATCCTGGGCTTCACTAATGAAGAGAAGATTGGCATCTACAAGCTGACAGGAGCTGTATTGCACCATGGAAACTTGAAATTCAAGCAAAAGCAGCGTGAGGAGCAGGCCGAGCCAGACGGCACAGAGGTGGCTGATAAAATCGCCTACCTGCTGGGCCTGAACTCAGCTGAGATGTTGAAGGCTCTGTGCTACCCAAGAGTGAAGGTCGGCAACGAGTATGTGACCAAGGGACAGACTGTGCCTCAGGTTAATAACTCAGTCAGTGCTCTGGCCAAGTCCATCTATGAGAGGATGTTCTTGTGGATGGTCATCCGTATCAATGAGATGTTGGACACCAAGAATCCAAGGCAGTTCTATATCGGTGTGCTTGACATTGCCGGGTTTGAGATCTTTGATTACAACAGCATGGAGCAGCTGTGCATCAACTTCACCAATGAGAAACTGCAacagtttttcaaccacaccatgtTCGTCCTGGAGCAAGAGGAGTACAAGAAGGAGGGAATCGTCTGGGCCTTCATTGACTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCATTGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGTCTTCAGACACTACCTTCAAGGACAAGCTGTACGCCCAGCATCTTGGCAAAACAAATGCGTTTGAGAAGCCCAAGCCTGCCAAAGGCAAGGCAGAGGCCCACTTCTCCCTGGTGCACTACGCCGGAACTGTGGACTACAACATCACTGGCTGGCTGGAGAAGAACAAGGACCCCCTGAACGACTCAGTTTGTCAGCTGTACCAGAAGTCTGGAGTCAAAATTCTGGCTGCCCtgtatccccctccccctcctgagGATAAAGCCAAGAAAGGAGGCAAGAAGAAGGGTGGTTCCATGCAGACTGTGTCCTCCCAGTTCAGGGAGAACTTACATAAGCTGATGACCAACTTGAGGAGCACTCATCCTCACTTTGTGCGCTGCCTGATCCCCAACGAGTCAAAGACTCCAGGTCTGATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAATGGTGTACTGGAGGGTATCAGGATCTGCAGAAAGGGCTTCCCCAGCAGAATCATCTATGCTGACTTCAAACAGAGGTACAAAGTACTGAATGCCAGTGTCATCCCTGAGGGCCAGTTCATGGACAACAAGAAGGCTTCTGAGAAGCTGCTTGGgtccattgatgtgaatcacgaggattacaagtttggacacaccaagGTGTTCTTCAAAGCCGGTCTGCTGGGTgtcctggaggagatgagagatgagaagcTGGCCACTCTGGTCGGCATGGTCCAGGCTCTCAGCCGTGGATTCCTCATGAGGAGAGAGTTTAGcaagatgatggagaggagAGAATCAATTTATGCCATCCAGTACAACATCCGCTCATTCATGAATGTCAAAACCTGGCCATGGATGAAGTTGTACTTCAAGATCAAGCCCCTGCTGCAGAGCGCTGAGACTGAGAAGGAGCTGGCCAACATGAAGGAGAACTATGACAAGATGACGGCAGACCTGGCCAAGGCTCTGTCCACAAAGAAGCAAATGGAGGAGAAGCTGGTGGCCTTGACGCAGGAGAAGAACGACCTGGCGCTCCAAGTCGCATCTGAAGGAGAGAGTCTGAACGATGCTGAGGAAAGGTGTGAGGGGCTCATCAAGAGCAAGATCCAGCAGGAGGCCAAACTCAAAGAGACGACCGAGaggctggaggatgaggaggagatcaATGCTGAGTTGACTGCTAAGAAGAGGAAGCTGGAGGATGagtgctctgagctgaagaaggaCATTGATGACCTGGAGCTCACCCTGGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAACCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGCCAAGCTGACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAGACACTGGATgacctgcaggcagaggaggacaAAGTCAACACTCTGACCAAGGCCAAGACCAAGCTGGAACAGCAAGTGGACGACCTTGAGGGTTCTCTGGAGCAAGAGAAGAAGCTCCGTATGGACCTTGAGAGATCCAAGAGAAAGCTGGAGGGAGATCTGAAACTGGCCCAGGAGTCCATAATGGACCTGGAGAATGACAAGCAGCAAGCTGATGAGAAAATCAAGAAGAAGGAGTTTGAGACCACCCAGCTCCTCAGCAAGGTTGAGGATGAGCAGTCTCTGGGAGCTCAGCTGCAGAAGAAGATCAAGGAACTCcagGCCCGTattgaggagctggaggaggaaatTGAGGCTGAGCGTGCTGCCAGGGCTAAGGTTGAGAAGCAGAGGGCCGATCTCTCCAGGGAACTTGAGGAGATCAGCGAGAGGCTGGAGGAGGCCGGAGGCGCCACTGCTGCTCAGATTGAGATGAACAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTCGAAGAGTCCACTCTGCAGCATGAGGCCACAGCCGCCGCTCTGCGCAAGAAGCAGGCCGACAGTGTGGCTGAGCTCGGGGAGCAGATCGACAACCTGCAGCGCGTCAAGCagaagctggagaaggagaagagcgaATACAAGATGGAGATTGATGACCTCTCTAGCAACATGGAGGCCGTCGCCAAGGCTAAGGGCAATCTGGAGAAGATGTGCCGTACTCTTGAGGACCAGCTGAGTGAGCTCAAGACTAAGAATGATGAGAATGTTCGCCAAGTCAACGACATCAGCGGACAGAGAGCCAGACTCCTGACAGAAAATGGTGAGTTTGGCCgccagctggaggagaaggaaGCCCTGGTGTCTCAGCTGACCAGAGGAAAACAGGCCTTCACCCagcaggtggaggagctgaagaggGCGATTGAGGAGGAGGTCAAGgcTAAAAACGCACTGGCCCACGGTGTTCAGTCTGCCCGCCATGACTGTGACCTCCTGAGGGAGCAGtttgaggaggagcaggaggccaAGGCAGAGCTGCAACGCGGCATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGGACTAAGTATGAAACTGATGCTATCCAGCGcacagaggagctggaggaggccaAGAAGAAGCTGGCCCAGCGTCTGCAGGATGCTGAGGAGACCATTGAGGCGACCAACTCCAAGTGCGCCTCCCTGGAGAAGACCAAGCAGAGGctgcagggagaggtggaggacctCATGATTGATGTTGAGAGAGCCAACGCATTGGCCGCCAACCTCGACAAGAAGCAGAGGAACTTTGACAAGGTTCTGGCAGAGTGGAAGCAGAAGTATGAGGAGGGCCAGGCTGAGCTGGAAGGAGCTCAGAAGGAGGCTCGCTCTATGAGCACTGAACTCTTCAAGATGAAGAACTCCTACGAGGAGGCTCTGGATCATCTGGAGACTCTGAAGAGAGAAAACAAGAACCTGCAACaggagATCTCTGACCTGACTGAGCAGATCGGAGAGACTGGCAAGAGCATCCATGAGCTGGAGAAGGCCAAGAAGACCGTGGAGACAGAGAAGTCTGAGATCCAGACCGCTCTGGAGGAGGCTGAGGGAACACTGGAGCACGAGGAATCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGATCAAGGGTGAGGTGGACAGGAAGATTGCTGAGAAGGACGAGGAGATGGAGCAGATCAAGAGGAACAGCCAGAGGGTGGTTGACTCCATGCAGAGCACCCTGGACTCTGAGGTCAGGAGCAGGAATGACGCCCTGAGggtgaagaagaagatggagggagacctGAACGAGATGGAGATCCAGCTGAGCCACTCCAACAGGCAGGCCGCTGAGGCCCAGAAACAGCTGAGGAATGTCCAGGGACAGCTCAAGGATGCCCAATTGCACCTTGATGACGCTGTCCGTGTCGCAGAAGACATGAAGGAGCAGGCAGCCATGGTGGAGCGCAGAAACGGCCTGATGGTGGCTGAAATCGAGGAGCTGAGAGTTGCtctggagcagacagagagaggccgcAAAGTGGCAGAGACTGAGCTGGTAGACGCCAGCGAGCGTGTTGGACTACTGCACTCCCAGAACACCAGCCTTCTGAACACCAAGAAGAAGCTGGAGACTGACCTCGTGCAGGTGCAGGGAGAGGTAGACGACATCGTCCAGGAGGCCAGGAATGCAGAGGAGAAGGCCAAGAAGGCAATCACTGATGCGGCCATGATGGCtgaggagctgaagaaggagcaggacaccagctctcacctggagaggatgaagaagaacctGGAGGTCACAGTCAAGGACCTGCAGCACCGCCTGGATGAGGCTGAGAATCTGGCCATGAAGGGAGGCAAGAAGCAGCTCCAGAAACTGGAGTCCAGGGTGCGTGAGCTTGAGACTGAGGTGGAGGCCGAGCAGAGAAGAGGTGTAGATGCAGTCAAGGGAGTCCGCAAGTATGAGCGCAGAGTCAAGGAGCTCACTTACCAGACTGAGGAGGATAAGAAGAACGTTAACAGACTTCAGGACTTGGTAGATAAGCTGCAGATGAAAGTGAAGGCCTACAAGAGGCACGCTGAGGAATCGGAGGAAGCAGCAAACCAGCACATGTCTAAGTTCAGGAAGGTTCAGCATGAGCTGGAGGAGGCTGAGGAGCGTGCTGACATCGCTGAGACTCAGGTCAACAAGCTCAGAGCCAAGACCCGTGACTCTGGAAAGGGAAAAGAAGTTGCTGAATAAACAAGACCAAAGTATTGAAGATCAAAGTCTTACCATTTTCCTGTGTTGcataaaatatgattttcatggTAAAATGTTGACCATTGATTaaaaacatgtaggcctacata

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like isoform X1

GO: NA

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948812.1 True 5924 mRNA 0.53 39 8964809 8984789

Neighbor

gene id symbol gene type direction distance location
LOC110485385 LOC106564166 coding upstream 26688 8842569 ~ 8938121 (+)
LOC110495027 LOC106593382 coding upstream 55885 8889782 ~ 8908924 (+)
LOC110494879 NA coding upstream 128390 8832523 ~ 8836419 (+)
LOC110485370 LOC106564160 coding upstream 143646 8817375 ~ 8821163 (+)
LOC110494882 LOC106593417 coding upstream 157149 8791198 ~ 8807660 (+)
LOC110513340 LOC106593387 coding downstream 45704 9030493 ~ 9049651 (+)
LOC110519048 LOC106593387 coding downstream 101403 9086192 ~ 9109227 (+)
LOC110513772 LOC106593162 coding downstream 167347 9152136 ~ 9219692 (+)
LOC110485387 LOC106593109 coding downstream 249605 9234394 ~ 9247725 (+)
LOC110494875 LOC106586284 coding downstream 275869 9260658 ~ 9273973 (+)
G1418141 NA non-coding upstream 96211 8855787 ~ 8868598 (+)
G1418097 NA non-coding upstream 155479 8782508 ~ 8809330 (+)
G1418108 NA non-coding upstream 163307 8800495 ~ 8801502 (+)
G1418107 NA non-coding upstream 163654 8799264 ~ 8801155 (+)
G1418175 NA non-coding downstream 3039 8987828 ~ 8994604 (+)
G1418179 NA non-coding downstream 24915 9009704 ~ 9066782 (+)
G1418184 NA non-coding downstream 73834 9058623 ~ 9084743 (+)
G1418211 NA non-coding downstream 188307 9173096 ~ 9219467 (+)
G1418255 NA non-coding downstream 272792 9257581 ~ 9258140 (+)
LOC110485368 LOC105027472 other upstream 174088 8761682 ~ 8790721 (+)
G1418037 LOC106594248 other upstream 383658 8578605 ~ 8581151 (+)
LOC110516831 LOC106593980 other upstream 474528 8452099 ~ 8491706 (+)
LOC110499479 ubl5 other upstream 572328 8384381 ~ 8392496 (+)
G1417938 NA other upstream 594299 8369841 ~ 8370510 (+)
LOC110487204 LOC106593073 other downstream 298437 9281428 ~ 9295974 (+)
LOC110510627 LOC106593081 other downstream 319778 9304567 ~ 9515031 (+)
LOC110493376 LOC106564189 other downstream 604300 9581609 ~ 9592897 (+)

Expression


Co-expression Network