XLOC_033192 (uqcc1)


Basic Information

Item Value
gene id XLOC_033192
gene name uqcc1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 52521467 ~ 52566574 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064483
ACAAAACGTGTAGGAAAGTATCAGTTACTGATTCCTGCTTTATAGTTacaataatactttattattgtGACTTTAGCGGAATCATGTATCGGCGACCGCTGCAGTCCGCCGTTAGACAGTTAATAAACGCCTCAGCATCGAGAGCTGTCCTCGGAAAGGCCATTGAACAAGTCGTGTGTCAGTCCAGGGCTTTGGTGGCTTGCCGTGTAGCAGCGGATGCTGGAGTCCCCTTTCATTCACAATGCAGAGCTCTTCACAGCACAGGAGAGCTGTGTACTGTTAAAGAGACCCCGCAGACCACAGATGAAGAGGTGGGAGCCTTCACCAAAATGATTGAGGCCATGGGCTTCACCGGACCCCTCAAATACAACAAATGGAAAATTAAGATCGCCGCCTTGCGCATGTACACATGCTGTGTAGAAAGAATCAACTATGACGAATTTTTTGAAAAATGCTCACTGCCTGACACGCTCAACTCTTGGTTCTTGGTGGCACAGCTTCATGTTTGGATGTGTCTGGTCCGGATGCGGCAGGAAGGCCGAGCTGGGAAATACATGTGCCGTTACATCGTCCACTCCATGTGGGAGGATGTGGAGCAGAGGAGCAAGATTATGGGAATTGATGCTCATCAGAGGAAGGAGAGCATGAAGGTGATGACTGAGACGTTCTATGCTGCACTTTTTGGATATGATGAGgGAATCCTCTCAGACGATTGCGTTCTTGCGGCGGCGATCTGGAGGAACATTTTCAACAGACAGTGTGAAGACCCCAGACAGCTGGAGATGATGGTCGAATATGTCCGCAAACAgATGCAGTTCATCGACGCTCTGGATGGGGAGGATCTGCTGTTAACAGGAGAGGTCAAATGGCGCCCCCTGCTGGAGGAAAACGCACAAAGCATCCTGAAGGTTCCAAGCCCCACCTACAACGACACCGGCCTCTAGAGCCACCAATCAGGACGCAGCACTCACCTCAGTAGCCACAACCACTTCATCTCTGTCTTTTCTCTCCCTCACTTTTTCCTGACTAGTGAGCATCAGCACACTATTGagaatacagcacacacacacacacacacacacacacacatttattctcAGATGTATTGAGAGTATTAAGGAACGGTTTGCACTCTCCTTTTTCTAAATGGATAGAGTAttcttatatttatatgtatgtctTTCCATACGGCAGCGATGTTGCAATATTTCTAGGAATATTTCCTGCTCTCTCACTTGTACCTCTCTCCTCAGTGTTTACGGCGCGActagttgtgttttatttttattttactctcAATGTGTTGGAGGAAAATGTTtcgagtgtgtgaatgtgagtgtattttttattttatttgtcagaGTTATCCACCAATAAAAGCGCATCGAGTCTCGAGCTCCTCTGACCTC

Function

symbol description
uqcc1 Predicted to be involved in mitochondrial respiratory chain complex III assembly. Predicted to be active in mitochondrion. Orthologous to human UQCC1 (ubiquinol-cytochrome c reductase complex assembly factor 1).

GO:

id name namespace
GO:0034551 mitochondrial respiratory chain complex III assembly biological_process
GO:0070131 positive regulation of mitochondrial translation biological_process
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-1034 Predicted to be involved in mitochondrial respiratory chain complex III assembly. Predicted to be active in mitochondrion. Orthologous to human UQCC1 (ubiquinol-cytochrome c reductase complex assembly factor 1).

Ensembl:

ensembl_id ENSDARG00000068176

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064483 True 1409 mRNA 0.47 9 52521467 52566574

Neighbor

gene id symbol gene type direction distance location
XLOC_033191 fam83c coding downstream 36901 52468139 ~ 52484566 (-)
XLOC_033190 mmp24 coding downstream 92641 52362395 ~ 52428826 (-)
XLOC_033189 eif6 coding downstream 172816 52339548 ~ 52348651 (-)
XLOC_033188 tomm34 coding downstream 286349 52226682 ~ 52235118 (-)
XLOC_033187 rims4 coding downstream 365040 52081752 ~ 52156427 (-)
XLOC_033193 gdf5 coding upstream 70734 52637308 ~ 52661824 (-)
XLOC_033194 sdc4 coding upstream 96523 52663097 ~ 52675630 (-)
XLOC_033195 oser1 coding upstream 149134 52715708 ~ 52723901 (-)
XLOC_033196 AL954861.2 coding upstream 189760 52756334 ~ 52757276 (-)
XLOC_033197 rbpjl coding upstream 190859 52757433 ~ 52796212 (-)
XLOC_033186 NA non-coding downstream 486811 52026491 ~ 52034656 (-)
XLOC_033181 NA non-coding downstream 979979 51528763 ~ 51541488 (-)
XLOC_033179 BX530017.1 non-coding downstream 1765019 50754501 ~ 50756448 (-)
XLOC_033178 BX530017.2 non-coding downstream 1773922 50742315 ~ 50747545 (-)
XLOC_033174 NA non-coding downstream 2016029 50457968 ~ 50505438 (-)
XLOC_033198 BX649282.5 non-coding upstream 356799 52923373 ~ 52923489 (-)
XLOC_033199 BX649282.4 non-coding upstream 466422 53032996 ~ 53033111 (-)
XLOC_033203 NA non-coding upstream 685983 53252557 ~ 53258068 (-)
XLOC_033212 NA non-coding upstream 1598358 54164932 ~ 54174073 (-)
XLOC_033220 NA non-coding upstream 1931230 54497804 ~ 54523451 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_15741859_15763888 NA coding CI01000340 null 15741357 ~ 15763888 (-)