Item | Value |
---|---|
gene id | LOC110485503 |
gene name | LOC106593098 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 14459338 ~ 14506937 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
transmembrane channel-like protein 6 |
id | description |
---|---|
K21988 | TMC; transmembrane channel-like protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036947994.1 | False | 4659 | mRNA | 0.48 | 22 | 14459338 | 14502251 |
XM_036947993.1 | False | 4628 | mRNA | 0.48 | 22 | 14459338 | 14503012 |
XM_036947995.1 | True | 4429 | mRNA | 0.49 | 22 | 14459338 | 14506937 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110493419 | LOC106564347 | coding | downstream | 76767 | 14379289 ~ 14382571 (-) |
LOC110495053 | LOC106564349 | coding | downstream | 88251 | 14323005 ~ 14371087 (-) |
LOC110485498 | LOC106592261 | coding | downstream | 115371 | 14293700 ~ 14343967 (-) |
LOC110485493 | LOC106592221 | coding | downstream | 170179 | 14275862 ~ 14289159 (-) |
LOC110487229 | LOC106591833 | coding | downstream | 184143 | 14270156 ~ 14275195 (-) |
tk1 | kith | coding | upstream | 71434 | 14578371 ~ 14583460 (-) |
ogal | LOC106564358 | coding | upstream | 120790 | 14627727 ~ 14647511 (-) |
LOC110518890 | LOC106591554 | coding | upstream | 140905 | 14647842 ~ 14664571 (-) |
LOC110494998 | LOC106596103 | coding | upstream | 401590 | 14908527 ~ 15433659 (-) |
LOC118940322 | LOC106598058 | coding | upstream | 456795 | 14954929 ~ 15014095 (-) |
G1422733 | NA | non-coding | downstream | 10436 | 14448296 ~ 14448902 (-) |
G1422732 | NA | non-coding | downstream | 11448 | 14447026 ~ 14447890 (-) |
G1422731 | NA | non-coding | downstream | 13769 | 14444784 ~ 14445569 (-) |
G1422729 | LOC106591520 | non-coding | downstream | 18569 | 14440016 ~ 14440769 (-) |
G1422728 | NA | non-coding | downstream | 21579 | 14437526 ~ 14437759 (-) |
G1422718 | NA | non-coding | upstream | 58027 | 14564964 ~ 14565596 (-) |
G1422717 | NA | non-coding | upstream | 66553 | 14573490 ~ 14577709 (-) |
G1422755 | NA | non-coding | upstream | 82795 | 14589732 ~ 14591384 (-) |
G1422759 | NA | non-coding | upstream | 92403 | 14599340 ~ 14604988 (-) |
G1422786 | NA | non-coding | upstream | 174460 | 14681397 ~ 14684923 (-) |
LOC110485459 | LOC106564320 | other | downstream | 494001 | 13959793 ~ 13997078 (-) |
LOC118940029 | exosc1 | other | downstream | 590667 | 13863439 ~ 13868827 (-) |
G1422125 | LOC106595916 | other | downstream | 601088 | 13856876 ~ 13858250 (-) |
G1422757 | NA | other | upstream | 84529 | 14591466 ~ 14592594 (-) |
G1422796 | NA | other | upstream | 258594 | 14765531 ~ 14768638 (-) |
G1422891 | LOC106601621 | other | upstream | 419428 | 14907317 ~ 15353090 (-) |
LOC118940320 | LOC106605908 | other | upstream | 499902 | 15003526 ~ 15247342 (-) |
G1422897 | NA | other | upstream | 826941 | 15333878 ~ 15334891 (-) |