LOC110514184 (LOC106590506)


Basic Information

Item Value
gene id LOC110514184
gene name LOC106590506
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 18949455 ~ 18980894 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949219.1
AATTGTTAAAACTCGGGACGCGCTTGACATAGGGGGCATACCTCTCGGAGACTTCTGGACCGCAACTTTGACACGCAGAGAGAAATGTTCTGCACAGGGATTTCAATAGGCTACCTTTCTGAAGTTTGTGGACAATACAACTGTATTAAAGGGATTTGAGCCTCATAGACACGTCGATAAAGTGGATAAGAAATAGCACTGTTTTGAGCACATTTCGGGACTACATTTTGCCGGATTACACAAGGACTCCACCACTATGGcgcccttcctccccctcctcctcctcctctcctcctcttcctctgtcctctccagtGACTGTCCAGAGGATTGCTCTTGTCAGGCCCAGGGTTCCATCTTCTGCATCCAGCGTCGTTCCACCGTCGTCCCCCGCGGCCTCCCTTCCTCTGTGAAACATCTCTACGTCTTCCAGAACGGCATCAACACTTTAGCCCAGGAAGACTTCACAGgcCTGGGGGAACTGGAGATGCTGGACCTGTCCCAGAATAAACTCACGGAGGTCCCGGATGGGGTCTTTGAAACGCTATCTTCGCTGAGGAATCTCGATTTGTCCGCAAACTACATTACCCACATCGCCAAGGATAGCTTCTCCGGATTGGTGCAACTCGAGAGGCTGTATCTCCACGGCAACCTCATCAAGAGCATCCAATCGGAGGCCTTCGAAGTTCTGGAGGATCTTCTGGAACTGAAGCTCCAGGGGAACCAGTTGACCGGTCTCCCAATGCTCCGTCTCCCCAGCCTTCTCCTCCTTGATCTCAGCTTCAACTCTCTCCCGACGCTGGGTCCCCAAGACCTCCAGACCCCCCACCTCGAGTCGCTCAAAGTGGCTGCGTTGGGGCTCACCACCCTGGACTCAGATCTGATGGCCTCCCTGGGGAACCTCCATGACCTTGATGTGTCCCAGAACCAGCTGGAGGGGATGCCTGAAGCATTGAAGGCCACCCGGGGGCTTATCAAGCTCAGCCTGGCTGCCAACCCCATTGGGGAGCTCCGGAACGAGGACTTCCAGAGTCTGGTGGGTCTCCAGGAGCTGGATCTCAGTGGGCTGAACCTCCAGGGCTTGCCCCAGGGTTTCTTCCAGCTCTTCCCCAGGCTGGGGCACCTCACGGCGGCCGAGAATCCCTTcaactgtctctgtcctctggccTGGTTCCCTGGCTGGCTGAAAGAGAAGAATGTGGATCTGGGACGCACAGAGGAGACAAGGTGCCACTTCCCACCAGTGAATGCTGGCAAGgtgcTGGCGGCGCTGGACCATCAAGATTTCGGCTGTCCACCTACGACCACTGTCATGACGAATGCCCTAGGGGAGGGGAGTACTTCCGCACCCCCCATTCCGACTACATCCCCTGGAAACACACATACCAACGCCATCCCCCCACCTCCGCCATTCCCTAGTGATGAACCATCCTCAACGGAGACAGACATTGAGAGTCGTCCCCCTCCTCCAGCTTCTCCGACTACCGCTTTCAGGGATGAGGGCCACATCTGCCCGCCGAACATCTGCCTCAATGGGGGTACGTGCCGCTTCGATCCTCTGGGACAGCTTGGATGTCTCTGTCCCCGCGGAACTATGGGCTTGTACTGCGAGAACCTGGAGTCGTCTAAACACAACCAGCCACCTCTCCAAACCTCCGCCCCCGAGGTTATGGCATCCATGGTCGCCCCCATTGTAACCTCTGATCCCAATGACATCAGTTCCCGTCAGGTGACCTCCACGTCCATCCTCCTCGACCTGCACCGTTTCCTCGAGACGAGGCCACACATCCGCGGGATTAAGCTGACCTACCGGAACCTCTCAGGGCCCGACCGGCGCCCCATGTCCCTCAGCGTCCCCGCCTCGTACCCAGAATACACCCTCCGAGGGCTCCGGCCCAACTGTACCTACTCGGTGTGCGCCAGCCCCCTGGCAGAGAGGGTGAACGGGGGTGGAGGCGGTGGAGGTAGCCCTACCGAGGGAGGGTCTTGTATGGAGGCTCGTACCGAGGGAGGTCCCCAAGCTTCGTCCTTGGAGCCCCAGGTGGATGATCAGAGCCAGCTCACCTACACCCTCATCCCAGCCTTGGCTGCTCTCGCCCTGGTCACGGGGGTGGCGGTGGTGGCCATCCTGGTTCTTTTCCTCCGGAGGAGACGGGCTCACATGGCGCTGGAAGGGGGTGAGATGGGACCAATGGAACTGGAGGGCCTTAAGGCTTGTCTGGAGAACGGCGTGGGGAACGGGGGCACCCTACCCCACAAGGGAGCGGATATCGCCCCCTGTCACACCTCCATCCCGACCCAGCCACAAAATGGCGGATCGTCACATCCCCTTCCACAAAATGGTGGTTTAGAATATGAGGCCCCCCTCATGAAGGGACAGGGGCACTGTCCATCGAATAATAATGTGGCATCCTTGAAGCCATCGTATTTCTAGAAACTCAGTCTGTTGTCTTCATGGATTTCTTAATATTTCTCAATGAGACTCAATgtactcaatgacattcagagctATGGAATGGAACAGAAGTAACTACCCCTGTAGAGGGTAACGCTACGCCCCGTTATCTCTAAGTGGATGGGAGGACTCTACCATTATGAGGCAGTGAAAGGGGGGTGTTTTAGCTCATCCAGCAGAGTTCAAGTTGATAGAAATGTAACAAGTATTTAAACCTAAAGTGCAATCGCCATGCCAAAAAGGGTCTTATAATCGGACTGAAAACGGAAGTGCCTTCTTGCATTGACATGATATGCTGTAATAATGATGCTTTTATTTTTGAAATGTTGATGTTTTGAAAAGAGCTGCATTGAATGAGTTTGCAATCCTTTTGCTGGATCAGGAGATTGGGAGAGCAGGGTTTGTGGAGGTATGGGGAAGGCACAGAGTCAAGGTTGGGAGGAGTAGAGGTGGGGTgcagaggtagagatagagacacaggtgtgtgtgtgctatgtaAACTGTTCAGCACTTCCGGAAATGAACGAGGCACCCCTCCCCACCTGCCCCCTGGGATAACTTGCACTGAAAAGAAGAGAATCTCTCTGCAACAGGGTGAAATGCTGATTCTGTAGAGATGGTACCACGGATAGAATACGGTTTTAGACGACATTACCACCAGTCAGATTTCCCTTCATcctgctacccccccccccccccccccccttacagtTGGTGC

Function

NR:

description
vasorin-like

GO: NA

KEGG:

id description
K24500 VASN; vasorin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949219.1 True 3173 mRNA 0.55 5 18949455 18980894

Neighbor

gene id symbol gene type direction distance location
LOC118940349 LOC106590535 coding downstream 227538 18720958 ~ 18721917 (-)
LOC110485574 LOC106564445 coding downstream 232994 18713229 ~ 18716461 (-)
LOC118940348 NA coding downstream 242329 18564334 ~ 18707126 (-)
LOC110487190 LOC106564382 coding downstream 455335 18359593 ~ 18494120 (-)
LOC110511293 LOC106590640 coding downstream 602947 18327660 ~ 18346508 (-)
LOC110485553 LOC106590435 coding upstream 48184 19029078 ~ 19032742 (-)
LOC118940350 LOC106564453 coding upstream 54931 19035825 ~ 19050381 (-)
LOC110485549 LOC106564452 coding upstream 69831 19050725 ~ 19093965 (-)
LOC110485538 mcrip2 coding upstream 346778 19327672 ~ 19333234 (-)
LOC110485530 LOC106589785 coding upstream 353438 19334332 ~ 19342508 (-)
G1425757 NA non-coding downstream 75167 18873909 ~ 18874288 (-)
G1425756 NA non-coding downstream 76446 18872798 ~ 18873009 (-)
G1425747 NA non-coding downstream 84119 18864896 ~ 18865336 (-)
G1425752 NA non-coding downstream 85489 18863081 ~ 18863966 (-)
G1425750 NA non-coding downstream 96101 18852869 ~ 18853354 (-)
G1425801 NA non-coding upstream 1521 18982415 ~ 18982671 (-)
G1425802 NA non-coding upstream 2843 18983737 ~ 18984741 (-)
G1425804 NA non-coding upstream 11073 18991967 ~ 18992374 (-)
G1425815 NA non-coding upstream 25481 19006375 ~ 19006700 (-)
G1425839 NA non-coding upstream 91847 19072741 ~ 19073367 (-)
G1425753 NA other downstream 82523 18866190 ~ 18866932 (-)
G1425652 NA other downstream 322414 18625756 ~ 18627041 (-)
G1425419 NA other downstream 622556 18319931 ~ 18326899 (-)
G1425986 NA other upstream 188486 19169380 ~ 19172677 (-)
G1426504 NA other upstream 818815 19799637 ~ 19803564 (-)
G1426547 NA other upstream 879407 19860301 ~ 19861663 (-)
LOC110485621 NA other upstream 1038735 20019616 ~ 20021101 (-)

Expression


Co-expression Network