Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493447 |
| gene name | LOC106564561 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21353194 ~ 21360283 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATPase asna1-like |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0045048 | protein insertion into ER membrane | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| id | description |
|---|---|
| K01551 | arsA, ASNA1, GET3; arsenite/tail-anchored protein-transporting ATPase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036949364.1 | True | 2805 | mRNA | 0.47 | 7 | 21353194 | 21360283 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495100 | LOC106589459 | coding | downstream | 523 | 21335261 ~ 21352671 (-) |
| LOC110493449 | LOC106564566 | coding | downstream | 59243 | 21292152 ~ 21293951 (-) |
| LOC110493451 | LOC106564568 | coding | downstream | 66486 | 21274885 ~ 21286708 (-) |
| LOC118940357 | LOC106589359 | coding | downstream | 132409 | 21214710 ~ 21220785 (-) |
| LOC110485675 | LOC106564530 | coding | downstream | 141530 | 21195654 ~ 21211664 (-) |
| ntan1 | ntan1 | coding | upstream | 3867 | 21364150 ~ 21367378 (-) |
| LOC110493446 | LOC106589449 | coding | upstream | 17503 | 21377786 ~ 21385648 (-) |
| LOC110493443 | NA | coding | upstream | 46789 | 21407072 ~ 21409247 (-) |
| LOC110493441 | sox10 | coding | upstream | 51343 | 21411626 ~ 21417430 (-) |
| LOC110493440 | LOC106564549 | coding | upstream | 69065 | 21429348 ~ 21439487 (-) |
| G1427860 | NA | non-coding | downstream | 3202 | 21349720 ~ 21349992 (-) |
| G1427858 | NA | non-coding | downstream | 20726 | 21327500 ~ 21332468 (-) |
| G1427854 | NA | non-coding | downstream | 28385 | 21324527 ~ 21324809 (-) |
| G1427811 | NA | non-coding | downstream | 90241 | 21262666 ~ 21262953 (-) |
| G1427797 | NA | non-coding | downstream | 104089 | 21248843 ~ 21249105 (-) |
| G1427809 | NA | non-coding | upstream | 269 | 21360552 ~ 21361055 (-) |
| G1427872 | LOC106589436 | non-coding | upstream | 38204 | 21398487 ~ 21399227 (-) |
| G1427871 | NA | non-coding | upstream | 39404 | 21399687 ~ 21400050 (-) |
| G1427879 | NA | non-coding | upstream | 62382 | 21422665 ~ 21423590 (-) |
| G1427880 | NA | non-coding | upstream | 63329 | 21423612 ~ 21424091 (-) |
| G1427703 | NA | other | downstream | 341874 | 21007541 ~ 21032030 (-) |
| LOC110511666 | LOC106589939 | other | downstream | 565609 | 20785995 ~ 20787989 (-) |
| G1427608 | NA | other | downstream | 578819 | 20772526 ~ 20774375 (-) |
| G1427470 | NA | other | downstream | 796302 | 20553196 ~ 20556892 (-) |
| LOC118940353 | LOC106590316 | other | downstream | 812013 | 20537413 ~ 20542283 (-) |
| G1428161 | LOC106564449 | other | upstream | 266394 | 21626677 ~ 21627280 (-) |
| G1428291 | LOC106588995 | other | upstream | 444048 | 21804331 ~ 21804660 (-) |
| G1428740 | NA | other | upstream | 979096 | 22339379 ~ 22340563 (-) |
| G1429642 | NA | other | upstream | 1894039 | 23254322 ~ 23254592 (-) |
