Gene
RNA
| Item | Value |
|---|---|
| gene id | mb |
| gene name | mb |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21491234 ~ 21494421 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mb | Predicted to enable oxygen binding activity. Acts upstream of or within several processes, including response to activity; response to hypoxia; and vasculogenesis. Is expressed in several structures, including cardiovascular system; digestive system; epithelial cell; nervous system; and pharyngeal arch. Human ortholog(s) of this gene implicated in acute kidney failure. Orthologous to human MB (myoglobin). |
| description |
|---|
| myoglobin |
| id | name | namespace |
|---|---|---|
| GO:0015671 | oxygen transport | biological_process |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0019825 | oxygen binding | molecular_function |
| GO:0005344 | oxygen carrier activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| K21892 | MB; myoglobin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001171862.1 | True | 670 | mRNA | 0.51 | 4 | 21491234 | 21494421 |
21,485,000
21,486,000
21,487,000
21,488,000
21,489,000
21,490,000
21,491,000
21,492,000
21,493,000
21,494,000
21,495,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493454 | NA | coding | downstream | 26136 | 21463000 ~ 21465098 (-) |
| LOC110493440 | LOC106564549 | coding | downstream | 51747 | 21429348 ~ 21439487 (-) |
| LOC110493441 | sox10 | coding | downstream | 73804 | 21411626 ~ 21417430 (-) |
| LOC110493443 | NA | coding | downstream | 81987 | 21407072 ~ 21409247 (-) |
| LOC110493446 | LOC106589449 | coding | downstream | 105586 | 21377786 ~ 21385648 (-) |
| LOC110493463 | LOC106588978 | coding | upstream | 291745 | 21786166 ~ 21790195 (-) |
| trnaa-ugc-129 | NA | coding | upstream | 336469 | 21830890 ~ 21830965 (-) |
| LOC110493466 | LOC103354157 | coding | upstream | 356316 | 21850737 ~ 21851205 (-) |
| LOC110495103 | LOC106598553 | coding | upstream | 396260 | 21890681 ~ 21895100 (-) |
| LOC118940360 | NA | coding | upstream | 425213 | 21919634 ~ 21923538 (-) |
| G1427923 | NA | non-coding | downstream | 1201 | 21489810 ~ 21490033 (-) |
| G1427901 | NA | non-coding | downstream | 20191 | 21470665 ~ 21471043 (-) |
| G1427902 | NA | non-coding | downstream | 25134 | 21465618 ~ 21466100 (-) |
| G1427897 | LOC106564544 | non-coding | downstream | 30831 | 21460151 ~ 21460403 (-) |
| G1427904 | NA | non-coding | upstream | 4334 | 21498755 ~ 21499887 (-) |
| G1427900 | NA | non-coding | upstream | 34477 | 21528898 ~ 21529475 (-) |
| G1427950 | NA | non-coding | upstream | 44245 | 21538666 ~ 21538872 (-) |
| G1428165 | NA | non-coding | upstream | 142470 | 21636891 ~ 21638651 (-) |
| G1428230 | LOC106589277 | non-coding | upstream | 268780 | 21763201 ~ 21768179 (-) |
| G1427703 | NA | other | downstream | 479914 | 21007541 ~ 21032030 (-) |
| LOC110511666 | LOC106589939 | other | downstream | 703649 | 20785995 ~ 20787989 (-) |
| G1427608 | NA | other | downstream | 716859 | 20772526 ~ 20774375 (-) |
| G1427470 | NA | other | downstream | 934342 | 20553196 ~ 20556892 (-) |
| G1428161 | LOC106564449 | other | upstream | 132256 | 21626677 ~ 21627280 (-) |
| G1428291 | LOC106588995 | other | upstream | 309910 | 21804331 ~ 21804660 (-) |
| G1428740 | NA | other | upstream | 844958 | 22339379 ~ 22340563 (-) |
| G1429642 | NA | other | upstream | 1759901 | 23254322 ~ 23254592 (-) |
| G1429643 | NA | other | upstream | 1760472 | 23254893 ~ 23255180 (-) |
