Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493466 |
| gene name | LOC103354157 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 21850737 ~ 21851205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0030553 | cGMP binding | molecular_function |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021567761.2 | True | 222 | mRNA | 0.55 | 2 | 21850737 | 21851205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-129 | NA | coding | downstream | 19772 | 21830890 ~ 21830965 (-) |
| LOC110493463 | LOC106588978 | coding | downstream | 60542 | 21786166 ~ 21790195 (-) |
| mb | mb | coding | downstream | 356316 | 21491234 ~ 21494421 (-) |
| LOC110493454 | NA | coding | downstream | 385639 | 21463000 ~ 21465098 (-) |
| LOC110493440 | LOC106564549 | coding | downstream | 411250 | 21429348 ~ 21439487 (-) |
| LOC110495103 | LOC106598553 | coding | upstream | 39476 | 21890681 ~ 21895100 (-) |
| LOC118940360 | NA | coding | upstream | 68429 | 21919634 ~ 21923538 (-) |
| LOC110511450 | NA | coding | upstream | 94810 | 21946015 ~ 21948796 (-) |
| LOC110493497 | LOC106564611 | coding | upstream | 173528 | 22024733 ~ 22048032 (-) |
| LOC110493498 | LOC100380663 | coding | upstream | 205675 | 22056880 ~ 22093664 (-) |
| G1428293 | NA | non-coding | downstream | 43315 | 21807084 ~ 21807422 (-) |
| G1428290 | NA | non-coding | downstream | 46529 | 21804007 ~ 21804208 (-) |
| G1428285 | LOC106588995 | non-coding | downstream | 52251 | 21797941 ~ 21798486 (-) |
| G1428230 | LOC106589277 | non-coding | downstream | 82558 | 21763201 ~ 21768179 (-) |
| G1428165 | NA | non-coding | downstream | 212086 | 21636891 ~ 21638651 (-) |
| G1428323 | NA | non-coding | upstream | 17389 | 21868594 ~ 21870083 (-) |
| G1428366 | NA | non-coding | upstream | 107111 | 21958316 ~ 21960112 (-) |
| G1428564 | LOC106588948 | non-coding | upstream | 134896 | 21986101 ~ 21987434 (-) |
| G1428570 | NA | non-coding | upstream | 136865 | 21988070 ~ 21988784 (-) |
| G1428573 | NA | non-coding | upstream | 143255 | 21994460 ~ 21994703 (-) |
| G1428291 | LOC106588995 | other | downstream | 46077 | 21804331 ~ 21804660 (-) |
| G1428161 | LOC106564449 | other | downstream | 223457 | 21626677 ~ 21627280 (-) |
| LOC110493443 | NA | other | downstream | 441539 | 21407072 ~ 21409247 (-) |
| G1427703 | NA | other | downstream | 839417 | 21007541 ~ 21032030 (-) |
| LOC110511666 | LOC106589939 | other | downstream | 1063152 | 20785995 ~ 20787989 (-) |
| G1428740 | NA | other | upstream | 488174 | 22339379 ~ 22340563 (-) |
| G1429642 | NA | other | upstream | 1403117 | 23254322 ~ 23254592 (-) |
| G1429643 | NA | other | upstream | 1403688 | 23254893 ~ 23255180 (-) |
| LOC110493468 | cnnm2 | other | upstream | 1501293 | 23233049 ~ 23353185 (-) |
| LOC110495111 | LOC106564590 | other | upstream | 1553446 | 23403904 ~ 23410855 (-) |
