Item | Value |
---|---|
gene id | LOC110493519 |
gene name | LOC106564707 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 23701419 ~ 23866193 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
potassium voltage-gated channel subfamily KQT member 5-like isoform X4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021567846.2 | False | 4749 | mRNA | 0.54 | 16 | 23701419 | 23866193 |
XM_021567848.2 | False | 4689 | mRNA | 0.54 | 15 | 23701419 | 23866193 |
XM_021567849.2 | False | 4641 | mRNA | 0.54 | 15 | 23701419 | 23866193 |
XM_021567850.2 | False | 4580 | mRNA | 0.54 | 14 | 23701420 | 23866193 |
TU1637188 | True | 975 | TUCP | 0.61 | 2 | 23863025 | 23865398 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
rims1b | LOC106586590 | coding | upstream | 6036 | 23588218 ~ 23695383 (+) |
LOC110493515 | LOC100286439 | coding | upstream | 120145 | 23571964 ~ 23581274 (+) |
LOC110493516 | LOC106588720 | coding | upstream | 129726 | 23565742 ~ 23571693 (+) |
LOC110493514 | lbx1 | coding | upstream | 147105 | 23551629 ~ 23554314 (+) |
LOC110493513 | LOC106564616 | coding | upstream | 202033 | 23471769 ~ 23500002 (+) |
LOC110493522 | LOC106564703 | coding | downstream | 18328 | 23884521 ~ 23899101 (+) |
LOC110493525 | NA | coding | downstream | 33491 | 23899684 ~ 23901837 (+) |
col17a1a | LOC106564695 | coding | downstream | 199146 | 24065339 ~ 24093254 (+) |
stn1 | NA | coding | downstream | 262318 | 24128511 ~ 24133165 (+) |
LOC110493536 | LOC106564693 | coding | downstream | 267430 | 24133623 ~ 24252905 (+) |
G1429890 | NA | non-coding | upstream | 1857 | 23699328 ~ 23699562 (+) |
G1429854 | NA | non-coding | upstream | 91701 | 23609166 ~ 23609718 (+) |
G1429801 | NA | non-coding | upstream | 196662 | 23504519 ~ 23504757 (+) |
G1429764 | NA | non-coding | upstream | 201108 | 23500101 ~ 23500311 (+) |
G1429894 | NA | non-coding | downstream | 150 | 23866343 ~ 23868129 (+) |
G1429994 | NA | non-coding | downstream | 14455 | 23880648 ~ 23880938 (+) |
G1429989 | NA | non-coding | downstream | 17311 | 23883504 ~ 23884457 (+) |
G1429991 | NA | non-coding | downstream | 38008 | 23904201 ~ 23904547 (+) |
G1429985 | LOC106586723 | non-coding | downstream | 41640 | 23907833 ~ 23910851 (+) |
G1429776 | NA | other | upstream | 253689 | 23447060 ~ 23447730 (+) |
G1429775 | NA | other | upstream | 254442 | 23446548 ~ 23446977 (+) |
LOC110493474 | LOC106588617 | other | upstream | 599667 | 23095456 ~ 23101754 (+) |
LOC110495106 | LOC106564608 | other | upstream | 728563 | 22962952 ~ 22986459 (+) |
G1428970 | LOC106564586 | other | upstream | 1040728 | 22659808 ~ 22660691 (+) |
G1432630 | NA | other | downstream | 1896773 | 25762966 ~ 25823263 (+) |
LOC110493559 | LOC106587120 | other | downstream | 2817132 | 26683052 ~ 26685644 (+) |
LOC110493575 | NA | other | downstream | 3453784 | 27313574 ~ 27333248 (+) |
LOC118940374 | LOC106587354 | other | downstream | 3671002 | 27534233 ~ 27540054 (+) |
LOC110493581 | LOC106564710 | other | downstream | 3676994 | 27543187 ~ 27547668 (+) |
G1429979 | NA | non-coding | upstream | 7726 | 23855096 ~ 23855299 (+) |
G1429978 | NA | non-coding | upstream | 8397 | 23854287 ~ 23854628 (+) |
G1429975 | NA | non-coding | upstream | 17887 | 23844825 ~ 23845138 (+) |
G1429968 | NA | non-coding | upstream | 31121 | 23831131 ~ 23831904 (+) |
G1429914 | NA | non-coding | upstream | 119028 | 23743742 ~ 23743997 (+) |