Item | Value |
---|---|
gene id | LOC118940376 |
gene name | LOC106564710 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 27549527 ~ 27555427 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
uncharacterized protein LOC110485844 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036949529.1 | False | 4789 | mRNA | 0.50 | 7 | 27549527 | 27555427 |
XM_036949530.1 | False | 4205 | mRNA | 0.52 | 8 | 27549527 | 27555427 |
XM_036949531.1 | False | 4618 | mRNA | 0.51 | 8 | 27549527 | 27555427 |
TU1642243 | False | 243 | lncRNA | 0.47 | 1 | 27549773 | 27550015 |
TU1642244 | False | 228 | lncRNA | 0.50 | 2 | 27550993 | 27551327 |
TU1642246 | False | 494 | TUCP | 0.58 | 1 | 27553716 | 27554209 |
TU1642249 | True | 436 | lncRNA | 0.45 | 2 | 27554705 | 27555402 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110493581 | LOC106564710 | coding | upstream | 1859 | 27543187 ~ 27547668 (+) |
LOC118940374 | LOC106587354 | coding | upstream | 9473 | 27534233 ~ 27540054 (+) |
LOC118940375 | LOC106564710 | coding | upstream | 15304 | 27527075 ~ 27534223 (+) |
LOC118940373 | LOC106587354 | coding | upstream | 23550 | 27523481 ~ 27525977 (+) |
LOC118940371 | LOC106564710 | coding | upstream | 30364 | 27513342 ~ 27519163 (+) |
LOC118940378 | LOC106564710 | coding | downstream | 1916 | 27557343 ~ 27559064 (+) |
LOC118940377 | LOC106564710 | coding | downstream | 3645 | 27559072 ~ 27563359 (+) |
LOC118940379 | LOC106564710 | coding | downstream | 9603 | 27565030 ~ 27570925 (+) |
LOC118940114 | LOC106564710 | coding | downstream | 17726 | 27573153 ~ 27578432 (+) |
LOC118940380 | LOC106564710 | coding | downstream | 26742 | 27582169 ~ 27586415 (+) |
G1434466 | NA | non-coding | upstream | 15254 | 27533666 ~ 27534273 (+) |
LOC118940372 | LOC106564710 | non-coding | upstream | 38128 | 27506322 ~ 27513332 (+) |
G1434457 | NA | non-coding | upstream | 45488 | 27496067 ~ 27504039 (+) |
G1434451 | NA | non-coding | upstream | 59374 | 27489760 ~ 27490153 (+) |
LOC118940115 | LOC106564710 | non-coding | downstream | 38473 | 27587727 ~ 27594181 (+) |
G1434489 | LOC106564710 | non-coding | downstream | 43392 | 27598819 ~ 27606732 (+) |
G1434499 | NA | non-coding | downstream | 69689 | 27625116 ~ 27633062 (+) |
G1434517 | NA | non-coding | downstream | 148930 | 27704357 ~ 27710413 (+) |
LOC110493575 | NA | other | upstream | 216354 | 27313574 ~ 27333248 (+) |
LOC110493559 | LOC106587120 | other | upstream | 863886 | 26683052 ~ 26685644 (+) |
G1432630 | NA | other | upstream | 1726264 | 25762966 ~ 25823263 (+) |
LOC110493582 | LOC106564710 | other | downstream | 43070 | 27595643 ~ 27602283 (+) |
G1434530 | NA | other | downstream | 163030 | 27718457 ~ 27718847 (+) |
G1434906 | NA | other | downstream | 641269 | 28196696 ~ 28197581 (+) |
G1435540 | NA | other | downstream | 1108927 | 28664354 ~ 28664979 (+) |
LOC110495133 | LOC106564943 | other | downstream | 1248390 | 28803282 ~ 28810516 (+) |