XLOC_033239 (BX470154.1)



Basic Information


Item Value
gene id XLOC_033239
gene name BX470154.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 55814757 ~ 55827517 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064545
ATACACATGGTTATGATTTACAACAAAAGTCGAAAGTtaagttttcttttcattttgtatttgttcATAATAAAAGCCAAAATAGTAACTTATAAAGAGACATTTTAAACGACATACTAAACACACATCTAACGTGAATAACTTTAACCAGCAAACGTGAATTAACATgcatagattttatttttttccactttaaAACTCCATGCGGTGACATAAGTGGAATATTCCTCAACTAGAACACTGCGAAGCCTGtcaaaaactttattatttaatattgaacAACATGAGAACAATACGATCTCCGGGGCACATCTGCATCATCACCGGCGGCGGATTCCGGTGAAGAGAGCGGAGCCGCGTTCATTCATTCCCCGTCAGTCCGTCCGGCTGAGGCCACCGTCGGCAGCATGAGCCAGAGGTTTACCGTGACTACCGGTGACATCCAGGGAGAAGTCAACCAGCTGTTTGAGGGCGATGAGGAGACACCGagcactgctgctgctgctgggggATCCGGCAAAGGTAAGAGATATACCTACTGTATAccttatgatgatgatgatgctcggACACCTGTAAAAGATGAACTCGTCCAACTGCTGGGAATGTGACACTGACATATTAATATTCAACACGCCACCCTCAAGTGTGAATAAATGACTCACAGACCATTTTCACC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097801

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064545 True 679 lncRNA 0.43 2 55814757 55827517

Neighbor


gene id symbol gene type direction distance location
XLOC_033238 LO017956.1 coding downstream 164506 55650119 ~ 55650251 (-)
XLOC_033235 slc12a5a coding downstream 229334 55449300 ~ 55585423 (-)
XLOC_033237 CR847793.1 coding downstream 259361 55555262 ~ 55555396 (-)
XLOC_033236 CR847793.2 coding downstream 267487 55547135 ~ 55547270 (-)
XLOC_033234 ctsa coding downstream 391537 55396807 ~ 55423220 (-)
XLOC_033240 cyp24a1 coding upstream 24757 55852274 ~ 55864687 (-)
XLOC_033241 eya2 coding upstream 82278 55909795 ~ 55997350 (-)
XLOC_033242 NA coding upstream 181661 56009178 ~ 56038817 (-)
XLOC_033243 NA coding upstream 234204 56061721 ~ 56073926 (-)
XLOC_033244 gcnt7 coding upstream 270454 56097971 ~ 56111829 (-)
XLOC_033230 NA non-coding downstream 536594 55274006 ~ 55278163 (-)
XLOC_033228 NA non-coding downstream 785844 55022836 ~ 55028913 (-)
XLOC_033245 NA non-coding upstream 502754 56330271 ~ 56618557 (-)
XLOC_033246 NA non-coding upstream 559937 56387454 ~ 56389460 (-)
XLOC_033247 CR388191.1 non-coding upstream 711492 56539009 ~ 56539125 (-)

Expression



Co-expression Network