XLOC_033241 (eya2)


Basic Information

Item Value
gene id XLOC_033241
gene name eya2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 55909795 ~ 55997350 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064547
CTCATTGTGGTAGAGCCGCACGCGCGCGCGCTGAGTACACGAGCAGGAGGAGGAGAATCTTCAGCTCCTTCATTTATTGAAGGTTTCTTCACATTAGTGTGCACTCGAGTGCGCACACACGCAGGGAGCGACACACACACGGCACAGCTCGAGAGCACACTGCGATACACGCAAACACTTCGCTTTTAATAGTCGAATATAACATTATGATGCGACATTAAACTCGTCTGTCGGCGCTTTGAAGAACCCGCGTCACGCTAGGATGGACAAACTTTTCTGAACTTTTTCGCTGATTTTTCGCTTGCTTTGCTTCGGATATGGAGAGCTGACAGCTGAACGTGCGCAAGAGGAAGTACATAACAGACAGTGACAGGAGCCACTAGACGCACACTTCAGGAAACACACATTTAGGCTACTCCAGCTGTGCTCATGGCAGCTTACGGACAGACGCAGTACAGCCCGGCGTTACAGCCAGCGGGTCCTTACACACcatacacacatcacacacaggGATACAGCATGACGTCCTACAATATTAAAACAGAAGATGGTTTGAGCCATTCACCTGGTCAGAGCAGTTTACTGGGATACACACCAAACTTCAGCGGGACGCCCCCCGGACAGACGCTCTACAGCTACTCACACGGCGGCAGCATTTCTTCTGGAATTTTCCAGGGTGCGAACAGCATCACGGGCTCAACGCCGTTCAGTCCAGCGCAGCAGGACTTCTCAACATATTCAAGCTACAGCCAAAGTCAATATTCTCCATACTACAACACACACTACAACAGCCCGTACATCACAGCCAGCAATATCACGCCATCGGCCATCACCACGGCGATACCCTATCAGCACACAGATCACCCCGCTGTATCGACCAATCACAGCCCAGAATCACACACAGcagAGTACCAGGCTCCCACGAGTCCTCCAACTCCAGGAAAGGATCAGGACGGAGCTCCACCGAGACGCAGTGCGGATGGGAAGCTGAGAGGCCGGAAGCGGGCCAGTGACCCCGTCCCTCCGCTGGACTCGGACATTGAGagggtGTTTGTTTGGGATCTGGATGAGACCATCATCATTTTCCACTCACTGCTCACCGGGACATTTTCCACACGCTTCGGCAAGGACTCCGGGAAGGCTGTTTCTCTGGGTTTGTGGATGGAGGAGATGATCTTCAACTTGGCTGATTCACGGCTGTTTTTCAATGACCTGGAGGAATGTGACCAGGTTCATATCGATGACGTGGCTTCGGATGACAACGGTCAAGATCTAAGTACATATAACTTCGGCACAGATGGTTTCCAGACACCAGCAGGTGGAGGTTCGCTCTGCCTGGGTTCAGGTGTTCACGGCGGGGTCGACTGGATGAGAAAACTAGCCTTCCGCTACCGTCGGGTTAAAGAGATCTACAACACATACAAGAACAATGTTGGAGGTTTGTTGGGCAGCCCAAAGCGGGAGGAGTGGCTTCAGCTGCGGCGAGAGATGGAGGTTTTGACGGATCTGTGGCTGACGCAGGCTCTCAAAGCCCTCGCACTCATTAACTCCAGACCGAACTGTGTGAATGTGTTGGTCACGACCACGCAGCTGATTCCAGCTCTGTCTAAAGTGCTTCTGTATGGTCTCGGAGGAGCGTTTCCCATCGAGAACATCTACAGCGCCACCAAAACAGGTAAAGAAAGCTGTTTTGAGCGTGTGACGCAGAGGTTCGGCAGGAGAGCCGTGTATGTGGTCGTAGGAGACGGTATTGAAGAGGAGACCGTCGCAAAGAAGAAGAACATGCCGTTCTGGCGAGTGACGTGTCGAGCGGATCTGGAGGCTTTGAGTCATGCACTAGAGCTGGATTACCTCTAGAGGGCGGCGTCTGCTTATCTGTGTCCCGCTGCGTCCAATCACATGACTGCACCACCAATCAGCAGAAAGCAGCAATCAGACTGGAAATCAACCCGAGAGAAACGCTTTCGTCTCCTTCCCGCTCTTTCATTCACTCCACAACAGCACTGCACTGAAAAACAGCAGAGATCTGACTGAGAATCAATAACAAACGACCACGCTGCTCATACTAGATAGAAAACCAGATGACAAACTCCAAACCTGTCTCCCAGAATCCAATGCACTTGACTCGACCTGCCATTTCCAGACATGGCTTTTCACGTCACATCTCTACACGTCACCAAAACTGGATTCAAAATgcgaaatattttttatttcagagaTGATAACTCGAGGTCATGTGACAATGCAGAATACTACTGTTTCAAACTATGATCACTGCATAAAGTGTACTGTGCCGCATATTATTTTTGTATATCACGCAGCGTAAGCTGTGCAGTATGCTGTAATGTTTGTTAGTTTTGTTCTGAAATGACACCAGAATACAAAGGAGGGTGCAAAATGCAAGATTTGagcattttaaaaatttttatttgaaaataggggacctattatgcaaaaatcacttttaaaagaggtttaaacacagtcatgtggcagcagtgtgtgaatataagcagcttctaatggtaaaactgtagtaaatgttttataatcacacttgatgaaaacagtctgcagaaactctttgattgacattttccctttgtacgtgtcatcagagggggaaagcccctcCCCTAAGTGGTGagctcattagcataggatgttattAAATCTGACACTATGCTTACACATGGGCACATAGCTCCGCcctcactttaaatttaaagcgacagtcaccaatatgacacaattaggatcaaaacccATAAGGGTCTGTTTCAAACAGTTAAAACATAATTTGTGtggcattttgagctgaaacttcacacacacatgcacacactctcagGACATCATAGacgtattttacatcttgtaaaaaggggtataataggtcccctttaaaccaCAAAATCATACGCATTTCTTAAACAACTAAAAATCATGAGTAAATGGTGAAAAAAAACtggattttatgtaattttgactAAATATATTTTCGTTTATTTCATCTTGCTGTGTCAAACCAAATTAACTACATATTGCACCATACATGAAATTGATCAATATAACATGCTATTGTACTGAGTCTGCAGAAAAACTAACCCCTTACTTCTTTATACGAGTACAAAGTGCTGCAAATCCAGCTATTTTAATGGCAAAACCCACCTGGAGATGATTTCAAAAGTGAACTAACCGTGAAATTGAGTGTTGCAGCACATGATAATAATGCTTCTGGTACTGAACTGAGATCAGCTTATGTCTGTCCTGTGAGTTTTTCTCCCTGCACTTGAAGCCGACTGCGTCTCTTGCCTGAACATCGTGCGGTTTCTGACTGGAtgtatattatttgttgtacttttgCTGAAGTTGATCTATTTACTGTATGTGCCGCTGATCCTGCATGTGCTTTTCACACCACCTCTTCTGTTCGCAATGATTTGTATATATGGTTTAATTGTTGATTATTTCTGGGCTTGTTATTATAgaataaagataaattaatttCA
>TCONS_00064548
AATTACGTGTGTTTTTTTGGAAACCGCAGGTGCTTTGTCATTGAGAAATACTGCGCGTTCACCTTTTGGTTCCCCCTGTGCAGGGCACGATTAGACATGAATTGTgctctgtgtgtttttgttcatattttaccttCGAGATGTACTGTTGGAGCGAAGCCTGGTGTGCTTTTAGGTCACGTATTTCTaacacgcacaaaaaaatgttctgtaatTTTTCAGGAGAGCTGACAGCTGAACGTGCGCAAGAGGAAGTACATAACAGACAGTGACAGGAGCCACTAGACGCACACTTCAGGAAACACACATTTAGGCTACTCCAGCTGTGCTCATGGCAGCTTACGGACAGACGCAGTACAGCCCGGCGTTACAGCCAGCGGGTCCTTACACACcatacacacatcacacacaggGATACAGCATGACGTCCTACAATATTAAAACAGAAGATGGTTTGAGCCATTCACCTGGTCAGAGCAGTTTACTGGGATACACACCAAACTTCAGCGGGACGCCCCCCGGACAGACGCTCTACAGCTACTCACACGGCGGCAGCATTTCTTCTGGAATTTTCCAGGGTGCGAACAGCATCACGGGCTCAACGCCGTTCAGTCCAGCGCAGCAG

Function

symbol description
eya2 Predicted to enable protein tyrosine phosphatase activity. Acts upstream of or within inner ear development. Predicted to be active in nucleus. Is expressed in several structures, including head mesenchyme; neural plate; otic vesicle; presumptive telencephalon; and sensory system. Orthologous to human EYA2 (EYA transcriptional coactivator and phosphatase 2).

GO:

id name namespace
GO:0045739 positive regulation of DNA repair biological_process
GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0048839 inner ear development biological_process
GO:0048856 anatomical structure development biological_process
GO:0016576 histone dephosphorylation biological_process
GO:0014706 striated muscle tissue development biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0004721 phosphoprotein phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
ko01009 Protein phosphatases and associated proteins

ZFIN:

id description
ZDB-GENE-040912-24 Predicted to enable protein tyrosine phosphatase activity. Acts upstream of or within inner ear development. Predicted to be active in nucleus. Is expressed in several structures, including head mesenchyme; neural plate; otic vesicle; presumptive telencephalon; and sensory system. Orthologous to human EYA2 (EYA transcriptional coactivator and phosphatase 2).

Ensembl:

ensembl_id ENSDARG00000018984

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064547 False 3512 mRNA 0.46 16 55909795 55997350
TCONS_00064548 True 625 mRNA 0.49 5 55946161 55958705

Neighbor

gene id symbol gene type direction distance location
XLOC_033240 cyp24a1 coding downstream 45108 55852274 ~ 55864687 (-)
XLOC_033239 BX470154.1 coding downstream 82278 55814757 ~ 55827517 (-)
XLOC_033238 LO017956.1 coding downstream 259544 55650119 ~ 55650251 (-)
XLOC_033235 slc12a5a coding downstream 324372 55449300 ~ 55585423 (-)
XLOC_033242 NA coding upstream 11828 56009178 ~ 56038817 (-)
XLOC_033243 NA coding upstream 64371 56061721 ~ 56073926 (-)
XLOC_033244 gcnt7 coding upstream 100621 56097971 ~ 56111829 (-)
XLOC_033245 NA coding upstream 332921 56330271 ~ 56618557 (-)
XLOC_033246 NA coding upstream 390104 56387454 ~ 56389460 (-)
XLOC_033237 CR847793.1 non-coding downstream 354399 55555262 ~ 55555396 (-)
XLOC_033236 CR847793.2 non-coding downstream 362525 55547135 ~ 55547270 (-)
XLOC_033230 NA non-coding downstream 631632 55274006 ~ 55278163 (-)
XLOC_033247 CR388191.1 non-coding upstream 541659 56539009 ~ 56539125 (-)

Expression


Co-expression Network