XLOC_033242


Basic Information

Item Value
gene id XLOC_033242
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 56009178 ~ 56038817 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064762
CGTGTTTTAACTTTTAAGTTTGCATTTATTAACTGTATTAATTTCAATAATACAATTGCATAttcattatttatgtaatttccCTTTGCGGTGAACGTGGTGTGATTTTATCAGATCCATCCTCAAAGTGTTTGTGTGCTCTGTTTTGGTAAGAGGTGCAGGAATTCTGTTGCCGTAACCTCAGTGCTGTAACCTCAAGCAAACCTgttgttatataaatatacattatgtACCCTGTGCCTCTAGTTACCTCGAGGCCGTGAAATGGGTGTTAACCAGCAACACCGTCTCTTCCTAAGGAAGTGTTTACAAATCTGTTCCCTACTTAAAACCTTTAAAACAAGCCTTGAGAGCAAACAGAGCTGCAAGCTTTGGAGGTGAACACAGATCTTGAGTATCACTGTTTTCATCCCCAGAGAAACAACATTTATCATAAGCAGAGCAAAACAAGGTGGATCCATTACACCATCATCACTTTCATCCTGAAGAACGGCAATTTCACATCGGTCGACAAGATGAGACTGAATAGGGATTCATGGGATAATAATGCTGCTTGTATCAAATACCTTCCTGCAAGGCACTCTTGAATCGGTGCATATTTGACTGAACATACTTGGAAAcgtttcttcaattgttttaAGGCTGCGTACCGGAACAAAGACTGGTACACACCTGTCACTCACACTCCTGAGAAAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064762 True 697 lncRNA 0.40 2 56009178 56038817

Neighbor

gene id symbol gene type direction distance location
XLOC_033241 eya2 coding downstream 11828 55909795 ~ 55997350 (-)
XLOC_033240 cyp24a1 coding downstream 144491 55852274 ~ 55864687 (-)
XLOC_033239 BX470154.1 coding downstream 181661 55814757 ~ 55827517 (-)
XLOC_033238 LO017956.1 coding downstream 358927 55650119 ~ 55650251 (-)
XLOC_033237 CR847793.1 coding downstream 453782 55555262 ~ 55555396 (-)
XLOC_033243 NA coding upstream 22904 56061721 ~ 56073926 (-)
XLOC_033244 gcnt7 coding upstream 59154 56097971 ~ 56111829 (-)
XLOC_033245 NA coding upstream 291454 56330271 ~ 56618557 (-)
XLOC_033246 NA coding upstream 348637 56387454 ~ 56389460 (-)
XLOC_033247 CR388191.1 coding upstream 500192 56539009 ~ 56539125 (-)
XLOC_033236 CR847793.2 non-coding downstream 461908 55547135 ~ 55547270 (-)
XLOC_033230 NA non-coding downstream 731015 55274006 ~ 55278163 (-)
XLOC_033249 NA non-coding upstream 916123 56954940 ~ 57108188 (-)
XLOC_033235 slc12a5a coding downstream 423755 55449300 ~ 55585423 (-)

Expression


Co-expression Network