LOC110495125


Basic Information

Item Value
gene id LOC110495125
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 28188546 ~ 28194592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110495125
gaacagctgggggaaagcgggggagaaaaggtaacctaatacgaccagcagagggagacagggtgaaaggaaaggacagaaagacacaacatgacaatacatgacatccaGTCTGTCGAAAGAGGGCCTGAAACAGCGCACAGAGCAGATCAGTTAGCCTCCCAGCTAGCGATACGCAAGCTCAAAGAGCATGACGCTGAGTTCACCACAAAGGTGTTCCCAGTGAAAGCTCAGGAGATCTTCGTTGACGCGCACAACGCTCTCACACAGAGATGGTGAGGGGGAACCGCTACAAGACTCTGCGGTGGCATTTCGTGGAGTCCCTGGAGGCCCAAGGTGGTGCACGCCCAATGTCCAGACATGGTCAGCAAAGGCAACATGTTTGGGCAGGTTACGGTGCGCATGCACtccagacagTCCTTGGCCGTCTACGACCGCTTCGGCAGACTAATGATGGGGAGCGAAGAGGAGCCCAGGGATGTGCTGGAGTACCTGGTTCTGGAGAGGCACCTCGTCAACCATTACGGCATGTGGAGGTTACATGGCAAGATTGTACCAGCCTGGGCCCCAGTGACGGAACCCATCGTCAAGACTGTTATGATCCTTGGCCCGGAGCTCAAGCCAGGCGAGGAATTCGAGGGGCTCAACTATGAAGTGCCCAAGCCTAAGGCTGTGCAGTGGCACAAATAGACCACAGGTGGGAGCTGTAATTCTGGGCCAACACGTACAGACTCAAAATCAACTGTTAAAATGaacattccattttttttaagAAAACATCATGAAGCTACATTTAGTTAGTTCTGCCTTTTTATATAAAAATGCACTGTTGTTCGTTACATCTAAAACAATAATAATCCATATTGTCCAGATCTGTACAGATTGTATGGTTTATTTCAATGGTGAATATATTACATGTTAATTTAaagaatacaaaaataaaatgtccCATCTCTTTTTTCATACCTTTTTTGATTTCAGTGAATGTACATTTTATATCCGAATAATCTGTACTTTTCATAGGCAATACATACAAAAATAACTCAAATCTCAACAGAAATCACTTTCAACTTGCATACAAAAAGGATGCATTGTGTAATGATGGTGTTTCATTCTACTTAACAAAAAGACAGCACACCCATTCAAAAAACGCTCACAAAACGAAGTCAGTCCATTGCGAATAACATGATATCACCACCGCACAAACTTTAATTTCCACTGAATGCGGAGATGTGGCCAAGATGGATGGATACATTTGGTAAATAAAGCATGGAAATGGTGAATAAATCAATGACAATGGCCTTATGTACAGTTTTAGCAGGACTATACTGGGGTGCAGTTATTTTTAGGGCAACTGTTTCCAAATTGAGTTGtatgctttaaaaaaataatgtgaATAAAGGTTTGGTCTTGCATTCTCCTCAAAGTGTAGATCTACCTTTTTAAAATTTTTAAATATTAATTCATGTATTTATTCTTCTTTAATAAAATTGGTATTGTAAATGATTCAAAAGAACAGATCATAGCTAGTTCTTTACAAGTCAGTATTGAATTAGTATGATTTAAGTTCTCTGTTAAAGTTAGatgtattattaatattagctctgcGTCTGTGGCGGACATGATCATGTTGTTGATCCACATTACTGACATTACATTTGATATCCTTGTAGC

Function

NR:

description
39S ribosomal protein L45, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110495125 True 1674 mRNA 0.41 5 28188546 28194592

Neighbor

gene id symbol gene type direction distance location
LOC110493608 LOC106564744 coding downstream 28304 28152333 ~ 28160242 (-)
LOC110493609 LOC106564743 coding downstream 40063 28131026 ~ 28148483 (-)
LOC110493604 LOC106564741 coding downstream 69250 28095258 ~ 28119296 (-)
LOC110493615 LOC106564740 coding downstream 93723 28077558 ~ 28094823 (-)
LOC110493602 LOC106564761 coding downstream 121838 28052876 ~ 28066708 (-)
LOC110495126 LOC106564751 coding upstream 60457 28255049 ~ 28286798 (-)
LOC110493621 LOC106564766 coding upstream 133546 28328130 ~ 28328877 (-)
LOC110495156 LOC106564766 coding upstream 171860 28366452 ~ 28369020 (-)
LOC118936556 LOC106569433 coding upstream 192544 28387136 ~ 28389733 (-)
LOC110493625 LOC106569433 coding upstream 200031 28394623 ~ 28397235 (-)
G1435189 NA non-coding downstream 116805 28071472 ~ 28071741 (-)
LOC110495123 LOC106587585 non-coding downstream 140545 28043251 ~ 28048026 (-)
G1435149 NA non-coding downstream 196215 27988179 ~ 27992331 (-)
G1435140 LOC100194684 non-coding downstream 201753 27978615 ~ 27986793 (-)
G1435270 NA non-coding upstream 30418 28225010 ~ 28227736 (-)
G1435289 NA non-coding upstream 55369 28249961 ~ 28250179 (-)
G1435290 NA non-coding upstream 56726 28251318 ~ 28251681 (-)
G1435245 NA non-coding upstream 57748 28252340 ~ 28252959 (-)
G1435244 NA non-coding upstream 58984 28253576 ~ 28254047 (-)
G1435257 NA other downstream 5985 28181042 ~ 28182561 (-)
LOC110493598 LOC104952775 other downstream 257524 27924167 ~ 27931058 (-)
G1434481 LOC106564710 other downstream 634103 27553723 ~ 27554443 (-)
rhbdl3 LOC106564658 other downstream 959355 27175992 ~ 27229581 (-)
G1435467 NA other upstream 352681 28547273 ~ 28547556 (-)
G1436694 NA other upstream 1417660 29612252 ~ 29612608 (-)
LOC110495137 LOC106564911 other upstream 1743734 29926378 ~ 29979179 (-)

Expression


Co-expression Network