LOC118936556 (LOC106569433)


Basic Information

Item Value
gene id LOC118936556
gene name LOC106569433
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 28387136 ~ 28389733 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949612.1
CTCTCACGGGTGTTCAGAATTAAGATGATTAGGATCAATTGGTCCATAAATATTTCTAGTTTGTAGGCACTCCTAGATCATTCAGTCATGTCTCTCCTGTGGCAATGTGCAATTGTTTTGGCTGTCGTCGTAGCAGCAGCAAGCGCTGCCAATGAAGATTTTAATGTGGATTGTGAGAAACACTCCATTAAAGTGACATGGAAGGTCAGTCCAGAGTTGGTTGAACATGCTGCCCGTCttttccttggacactgtgttccGTCCACATTTTCTGTTCTTCCCACGGGAGAAGGGATGGCGACATTCCACTACAACCTCAATGGCTGTGCCATCAAGAAACGGGTGACTGGCAAAAAACACATCTATTCAACCAGCCTGACTTACAGACCTAACCAAAAGCCCAAACCTGCTGCTATTAGTCACCATATTAAGTGTGTTTACATAAGACCTGAGGGATGGATTCCCCCATTCCTTATCCCTGCCTATGGTAGTGCTGAGGGTCATGGAGGATTGGTTTTCCACATGGCACTCCTCAATGAAGACCTTACTGGTCTGGCTAAGAGCAGCCTGTTTCCCCTGGGCTCTTTCATCCCCATCTGGGCAGCAGTGGATCAGAAGGACCATCAGCCCTTGCTGCTGCTCTTGGAGGAGTGTGTGGCGGCCACAACACCAGAACTGCAGTCTGCGAGCCCGGTGTACCCCATCATCACCAACAAGGGTTGCCTTGCAGATGGGAAGACTGGGAACTCCAGGTTCCTGCCTAGGTACCACTCGTCTGCTATTCTGCTTTACCTGCAGTCCTTCAAGTTTGCCTTAGGCGAGGAAGTGTATATTCATTGTAAGCTTGTTGCATGGGACCCTGAGGTTTTTGATGTCGAAAAGAAGGCCTGCCACTATATTAAAGAGACTGGACGATGGGAGCTGCTGGACGACCCGTCTCAAAGTGACCTCTGCAAGTGCTGTGACTCGAGTTGCAAGCCTCGGTTGAAGAGGGGCGTGGATTCAGAACCCCAGGGCCTGGTTCAAAACTCTGTTCTTGGACCGCTCACAATAGTGGAAAACTCTGAAACCCGGATCCCCAGTGAATTTGTAAAATATCCTACTGTAGAACAAGTTGACTGGTTGGTGTAATGGTCTGGAACACTTTgcttgtcagGGATGGCTGTCTTTTCTGTCTCTACAGCCATCTATTTGTAGGTGGCCTGAAGAAGGGTGCATCACGTTCCACTATCCCCAGTATGGATATGAAGTCCTTTGACTTGAGCATGTTTCAATAAAATGAGTactttacaa

Function

NR:

description
uncharacterized protein LOC109889121

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949612.1 True 1293 mRNA 0.48 11 28387136 28389733

Neighbor

gene id symbol gene type direction distance location
LOC110495156 LOC106564766 coding downstream 18116 28366452 ~ 28369020 (-)
LOC110493621 LOC106564766 coding downstream 58262 28328130 ~ 28328877 (-)
LOC110495126 LOC106564751 coding downstream 100338 28255049 ~ 28286798 (-)
LOC110493620 LOC106587683 coding downstream 185516 28194422 ~ 28201620 (-)
LOC110495125 NA coding downstream 192544 28188546 ~ 28194592 (-)
LOC110493625 LOC106569433 coding upstream 4890 28394623 ~ 28397235 (-)
LOC110495129 NA coding upstream 107052 28496785 ~ 28521285 (-)
LOC110493627 LOC106564957 coding upstream 165821 28555554 ~ 28560692 (-)
LOC110493630 LOC106564955 coding upstream 220652 28610385 ~ 28622231 (-)
LOC101268960 LOC106564996 coding upstream 234507 28624240 ~ 28626947 (-)
G1435324 NA non-coding downstream 66202 28319595 ~ 28320934 (-)
G1435308 NA non-coding downstream 96984 28289941 ~ 28290152 (-)
G1435296 NA non-coding downstream 108965 28277968 ~ 28278171 (-)
G1435244 NA non-coding downstream 133089 28253576 ~ 28254047 (-)
G1435245 NA non-coding downstream 134177 28252340 ~ 28252959 (-)
G1435375 NA non-coding upstream 944 28390677 ~ 28401504 (-)
G1435347 NA non-coding upstream 17350 28407083 ~ 28410677 (-)
G1435415 NA non-coding upstream 64450 28454183 ~ 28493908 (-)
G1435390 NA non-coding upstream 65071 28454804 ~ 28462708 (-)
G1435383 NA non-coding upstream 66760 28456493 ~ 28466738 (-)
G1435199 LOC106587683 other downstream 186454 28189019 ~ 28200682 (-)
G1435257 NA other downstream 204575 28181042 ~ 28182561 (-)
LOC110495123 LOC106587585 other downstream 339135 28043251 ~ 28048026 (-)
G1435467 NA other upstream 157540 28547273 ~ 28547556 (-)
G1436694 NA other upstream 1222519 29612252 ~ 29612608 (-)
LOC110495137 LOC106564911 other upstream 1548593 29926378 ~ 29979179 (-)
G1437411 NA other upstream 1660869 30050602 ~ 30114123 (-)
G1437507 NA other upstream 1851717 30241450 ~ 30243706 (-)

Expression


Co-expression Network