LOC110493625 (LOC106569433)


Basic Information

Item Value
gene id LOC110493625
gene name LOC106569433
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 28394623 ~ 28397235 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949614.1
CTCTCACGGGTGTTCAGAATTAAGATGATTAGGATCAATTGGTCCATAAATATTTCTAGTTTGTAGGCACTCCTAGATCATTCAGTCATGTCTCTCCTGTGGCAATGTGCAATTGTTTTGGCTGTCGTCGTAGCAGCAGCAAGCGCTGCCAATGAAGATTTTAATGTGGATTGTGAGAAACACTCCATTAAAGTGACATGGAAGGTCAGTCCAGAGTTGGTTGAACATGCTGCCCGTCttttccttggacactgtgttccGTCCACATTTTCTGTTCTTCCCACGGGAGAAGGGATGGCGACATTCCACTACAACCTCAATGGCTGTGCCATCAAGAAACGGGTGACTGGCAAAAAACACATCTATTCAACCAGCCTGACTTACAGACCTAACCAAAAGCCCAAACCTGCTGCTATTAGTCACCATATTAAGTGTGTTTACATAAGACCTGAGGGATGGATTCCCCCATTCCTTATCCCTGCCTATGGTAGTGCTGAGGGTCATGGAGGATTGGTTTTCCACATGGCACTCCTCAATGAAGACCTTACTGGTCTGGCTAAGAGCAGCCTGTTTCCCCTGGGCTCTTTCATCCCCATCTGGGCAGCAGTGGATCAGAAGGACCATCAGCCCTTGCTGCTGCTCTTGGAGGAGTGTGTGGCGGCCACAACACCAGAACTGCAGTCTGCGAGCCTGGTGTACCCCATCATCACCAACAAGGGTTGCCTTGCAGATGGGAAGACTGGGAACTCCAGGTTCCTGCCTAGGTACCACTCGTCTGCTATTCTGCTTTACCTGCAGTCCTTCAAGTTTGCCTTAGGCGAGGAAGTGTATATTCATTGTAAGCTTGTTGCATGGGACCCTGAGGTTTTTGATATCGAAAAGAAGGCCTGCCACTATATTAAAGAGACTGGAGGATGGGAGCTGCTGGACGACCCGTCTCAAAGTGACCTCTGCAAGTGCTGTGACTCGAGTTGCAAGCCTCGGTTGAAGAGGGGCGTGGATTCAGAACCCCAGGGCCTGGTTCAAAACTCTGTTCTTGGACCGCTCACAATAGTGGAAAACTCTGAAACCCGGATCCCCAGTGAATTTGTAAAATATCCTACTGTAGAACAAGTTGACTGGTTGGCGTAATGGTCTGGAACACTTTGCTTGTCAGGGATGGCTGTCTTTTCTGTCTCTACAGCCATCTAATTGTAGGTGGCCTGAAGAAGGGTGCATCACGTTCCACTATCCCCAGTATGGATATGAAGTCCTTTGACTTGAGCACGTTTCAATAAAATGAGTactttacaa

Function

NR:

description
uncharacterized protein LOC109889121

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949614.1 True 1293 mRNA 0.48 11 28394623 28397235

Neighbor

gene id symbol gene type direction distance location
LOC118936556 LOC106569433 coding downstream 4890 28387136 ~ 28389733 (-)
LOC110495156 LOC106564766 coding downstream 25603 28366452 ~ 28369020 (-)
LOC110493621 LOC106564766 coding downstream 65749 28328130 ~ 28328877 (-)
LOC110495126 LOC106564751 coding downstream 107825 28255049 ~ 28286798 (-)
LOC110493620 LOC106587683 coding downstream 193003 28194422 ~ 28201620 (-)
LOC110495129 NA coding upstream 99550 28496785 ~ 28521285 (-)
LOC110493627 LOC106564957 coding upstream 158319 28555554 ~ 28560692 (-)
LOC110493630 LOC106564955 coding upstream 213150 28610385 ~ 28622231 (-)
LOC101268960 LOC106564996 coding upstream 227005 28624240 ~ 28626947 (-)
LOC110493634 LOC106564954 coding upstream 239777 28637012 ~ 28645555 (-)
G1435374 NA non-coding downstream 726 28386108 ~ 28393897 (-)
G1435324 NA non-coding downstream 73689 28319595 ~ 28320934 (-)
G1435308 NA non-coding downstream 104471 28289941 ~ 28290152 (-)
G1435296 NA non-coding downstream 116452 28277968 ~ 28278171 (-)
G1435244 NA non-coding downstream 140576 28253576 ~ 28254047 (-)
G1435347 NA non-coding upstream 9848 28407083 ~ 28410677 (-)
G1435415 NA non-coding upstream 56948 28454183 ~ 28493908 (-)
G1435390 NA non-coding upstream 57569 28454804 ~ 28462708 (-)
G1435383 NA non-coding upstream 59258 28456493 ~ 28466738 (-)
G1435384 NA non-coding upstream 77067 28474302 ~ 28486576 (-)
G1435199 LOC106587683 other downstream 193941 28189019 ~ 28200682 (-)
G1435257 NA other downstream 212062 28181042 ~ 28182561 (-)
LOC110495123 LOC106587585 other downstream 346622 28043251 ~ 28048026 (-)
G1435467 NA other upstream 150038 28547273 ~ 28547556 (-)
G1436694 NA other upstream 1215017 29612252 ~ 29612608 (-)
LOC110495137 LOC106564911 other upstream 1541091 29926378 ~ 29979179 (-)
G1437411 NA other upstream 1653367 30050602 ~ 30114123 (-)
G1437507 NA other upstream 1844215 30241450 ~ 30243706 (-)

Expression


Co-expression Network