XLOC_033244 (gcnt7)


Basic Information

Item Value
gene id XLOC_033244
gene name gcnt7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 56097971 ~ 56111829 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064549
ACTCGGGAGTGTCAAAAAAAGAGGTGTAAATGCTTTGTGCTTCTTCAAGCTCCTCCTcttctctcctctcctctcctctcaaGGGAGGTGTAACTGAGCAGCCGCTCGTAGGAGCAGATCACAGCaacaacagcacaaaaaaaaagagaaaagaaattcaCACACAAAGCAGAGGCTTTCTCTGATGCACTGACGCTGGATTTGGGCTCACTTTATAGACTGAGGTCATGTGGAAGTCAAGACTCCGAGAGACGCACATGTTTGTGAATGTTTAATCTGGTTTCCCATTTACAGGAGCGGACACGAGCTGAAAGGAGGTCTGTAGCTGCTTTTCAGATGTTGGACTATTATGGTCCAGCTTGAGAACACCAAGTGCAGTTTTCTCTTCTGCCTTGGAATTTGCACCCTAATATGTTCTGCAATCTACCTTaaagccaaagtggctagtgaccCTCTTCCTATAAATGACTTGACCACCCTATCCCCAACCCCACCACCACTACCATGCCCACCATCCAACACCTGTGACATTCTTCCACCTGCAACACCCGGGTTTAAATGGCAAAGAAAAGACTGTGAGAAAATCAGCTATCACATCCAACCAGACACCAACTGTGATCTACTGCTGTCCCAGCTGCATTTCATCACAGCACCGCTGagcaaagaagaagaagattatCCTTTGGCTTTCATCATCACCATACACAAAGAGCTTGCAACGTTTGTGCGACTCCTGAGAGCCATTTATGCACCGCAAAACGTCTACTGCATTCACATCGACCAGAAAGCATCAGAAAAATACAAGTCGAGCGTCAGAAACCTATCCAGATGCTTCCCAAACGTTTTCCTCTCATCGGTCAATGTAAAAGTAACCTACGCAGGCTTTTCCCGTCTGCAGGCCGACATTAACTGCATGAAGGACTTGGTGGAATCTCCAATTCAATGGAAAAAGGTTATAAATTTGTGCGGTCAGGATTACCCCATCCAGACCAATTTGGAGTTGGTGCGGTACATGCAAACTCCTGAATGGAAAGACAGGAACATGACGCCGGGAATCAAGCAGCCGCCTAGTATGAGGTACAGGACTGCATTTCAGTATGTGGAGGTAAAAAACACCCACGTGGCTCAGACTGGGAGAAAGAAGGGACCACCACCGCATAATTTGAAGATTTACTTCGGGACGGCTTATTACTCCTTGACAAGACCGTTTGTGGAGTATGTCCTCGACAACCCAGTGGCCAAAGACTTGCTGAGCTGGTCTAAAGACAGCTACAGTCCAGATGAGCATTACTGGGTGACGCTAAACCACATTAAGGAAGCACCAGGCAGCAATGTAGAAGGAGAATGGGAAGGTAATGTCCGCGCAGTCAAATGGAGTGACCAACAAGGAACAGCACATCAGGGTTGTAAAGGACAATACATCAGAGGTATCTGCGTTTACGGGATTGGCGACCTACCATGGCTTATTGAAAAAGAAAGCATGTTTGCTAATAAGTTTGAAATGGCAAGCTTCCCAGAAGCACTGGACTGTATGGAACTGTGGCACAGACATAAAGTTCTCCAGCAAGCAACTGTTCCCATTCAACCATCATGGCATCTCACCACAGAAGTGGAAGTCGTAAACCGCACGCTCATTCTAACACCAGGAGATTGTGTCTGACTGAATATCACAGACATTCAGAAGTTTACAGGCTAGCTGGCATCTACACGctcaaaaacacaaatgaagaacATCGCAAAATCAAGTTTCTCATGTAGataatattttcataaatattccATTTCAAGGCTCGCAAAATTTCTAAATCCCTAGTAGTTTTTTGGGCAAGAACACTTTATTGTTTTTAGTAACCTGAAATAAGTGTAAGTGGCCCgaatagaaaatatattatttattaaataaaaagaaatacacacatttaccaaataaataataaataaataaaagttgcaTCCATATGAAAGTTCTACATTTGCATACATTGCATTGATTATAGGCTGCGAttatataatttctttttttttttaaataaccacattttatttaattattttaattcattaatttatttacttattaattgtcTCTAAAACATCATGTGAAAACCTCCAGGCAGGAAAATTATATTCAATATAATTACCCAATTTGTGAGAGAATGCAAAAGCAttaaagtaatgtttattttcttttttaagattAATTTTAGGTAGCCAGACTGGAAAACAAGAGCGGGATGTCGGGCTAGCAGTTTTGCGGGTCCTGCAGTTGCATGGCACTGCAGCTTGTGATGTTTAAATATTGAAAACTTGTGAACGCTGAAGATTTCATGAGTGCGGAGTAAATTAATAGATGTAATGTTAATAGTAATAGACAATTTGGTTTAAGTATCATTTCCCAATGTTAActtctggcttattacctgcttgTTATGAagttattggctgtttattagtatttatatagtatggtcttattctacatccctaatcctacatATTACCATACTTCATTACTATTAAGAAGCAGCAAATGAGTaatttattgagctaaaattCTTAGTTAATTGCTTGTTCATAGCAGAATTGTacttttaaataaagtgtgactaagttatatttattttatttatttatattttgcactGATATTTACTAAATTAATAAACTGTAGCTTAATAAAGTTGTATGCTCAGCAAAATACTGccgttattattaaattataaaacaatgtaaagttttttttaattatctgtgaaaataaaataatttaatttctgtatgcaTTTAATAAAGAATTACGCAAATACgtaaatgaaaatataaacaaactttTCCTTTAAAAAGAAGTTGTAAGTAACCAAACGTTTTGAGTTGTTTTTCACTGCACACCATTACAGCATTTCATTGTACAGCTGTCATAAATGCAAGTTGCATATGTTTCAATATGTAAATATTCATGCAAAAAGTGAtgtattctgctttaaaaaagtcTGTAGTCAAATTTTAACTTCAGCACCATTCATTTTGTTTAGTCTTTGTGCTTTTGGTCATTGCTGTCAACTGTATTTGATCAATGAAACATGGATCAAGCACTTTTATTTCCACTGTGgtcttaataatattaataaatgtgtcACCTCAATAATCCGGAACAAAACAAAATGGACCAAATGTGAATTAAAGGGGAActatgatgaaaatcctcttttgtaagctgtttagacagaactgtgaTAAACAGAA
>TCONS_00064550
ATGGTCCAGCTTGAGAACACCAAGTGCAGTTTTCTCTTCTGCCTTGGAATTTGCACCCTAATATGTTCTGCAATCTACCTTaaagccaaagtggctagtgaccCTCTTCCTATAAATGACTTGACCACCCTATCCCCAACCCCACCACCACTACCATGCCCACCATCCAACACCTGTGACATTCTTCCACCTGCAACACCCGGGTTTAAATGGCAAAGAAAAGACTGTGAGAAAATCAGCTATCACATCCAACCAGACACCAACTGTGATCTACTGCTGTCCCAGCTGCATTTCATCACAGCACCGCTGagcaaagaagaagaagattatCCTTTGGCTTTCATCATCACCATACACAAAGAGCTTGCAACGTTTGTGCGACTCCTGAGAGCCATTTATGCACCGCAAAACGTCTACTGCATTCACATCGACCAGAAAGCATCAGAAAAATACAAGTCGAGCGTCAGAAACCTATCCAGATGCTTCCCAAACGTTTTCCTCTCATCGGTCAATGTAAAAGTAACCTACGCAGGCTTTTCCCGTCTGCAGGCCGACATTAACTGCATGAAGGACTTGGTGGAATCTCCAATTCAATGGAAAAAGGTTATAAATTTGTGCGGTCAGGATTACCCCATCCAGACCAATTTGGAGTTGGTGCGGTACATGCAAACTCCTGAATGGAAAGACAGGAACATGACGCCGGGAATCAAGCAGCCGCCTAGTATGAGGTACAGGACTGCATTTCAGTATGTGGAGGTAAAAAACACCCACGTGGCTCAGACTGGGAGAAAGAAGGGACCACCACCGCATAATTTGAAGATTTACTTCGGGACGGCTTATTACTCCTTGACAAGACCGTTTGTGGAGTATGTCCTCGACAACCCAGTGGCCAAAGACTTGCTGAGCTGGTCTAAAGACAGCTACAGTCCAGATGAGCATTACTGGGTGACGCTAAACCACATTAAGGAAGCACCAGGCAGCAATGTAGAAGGAGAATGGGAAGGTAATGTCCGCGCAGTCAAATGGAGTGACCAACAAGGAACAGCACATCAGGGTTGTAAAGGTACAAGCACAAACATTCCTacagtaaaatatagcatttatttCTAG

Function

symbol description
gcnt7 Predicted to enable acetylglucosaminyltransferase activity. Predicted to be located in Golgi membrane. Orthologous to human GCNT7 (glucosaminyl (N-acetyl) transferase family member 7).

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-120919-3 Predicted to enable acetylglucosaminyltransferase activity. Predicted to be located in Golgi membrane. Orthologous to human GCNT7 (glucosaminyl (N-acetyl) transferase family member 7).

Ensembl:

ensembl_id ENSDARG00000040608

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064549 False 3243 mRNA 0.38 4 56097971 56111829
TCONS_00064550 True 1110 mRNA 0.46 2 56100756 56103718

Neighbor

gene id symbol gene type direction distance location
XLOC_033243 NA coding downstream 24045 56061721 ~ 56073926 (-)
XLOC_033242 NA coding downstream 59154 56009178 ~ 56038817 (-)
XLOC_033241 eya2 coding downstream 100621 55909795 ~ 55997350 (-)
XLOC_033240 cyp24a1 coding downstream 233284 55852274 ~ 55864687 (-)
XLOC_033239 BX470154.1 coding downstream 270454 55814757 ~ 55827517 (-)
XLOC_033245 NA coding upstream 218442 56330271 ~ 56618557 (-)
XLOC_033246 NA coding upstream 275625 56387454 ~ 56389460 (-)
XLOC_033247 CR388191.1 coding upstream 427180 56539009 ~ 56539125 (-)
XLOC_033248 cdh22 coding upstream 526859 56638688 ~ 56877366 (-)
XLOC_033249 NA coding upstream 843111 56954940 ~ 57108188 (-)
XLOC_033238 LO017956.1 non-coding downstream 447720 55650119 ~ 55650251 (-)
XLOC_033237 CR847793.1 non-coding downstream 542575 55555262 ~ 55555396 (-)
XLOC_033250 NA non-coding upstream 996496 57108325 ~ 57122910 (-)

Expression


Co-expression Network