XLOC_033249


Basic Information

Item Value
gene id XLOC_033249
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 56954940 ~ 57108188 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065257
CTCGTCGCCGCATGAGGCTGCGCGCTGCTGTCAGACGCGCGCTGGAGACACGAGCGGATCACGCGCGGCGGAGGAGCGGAGCGCAGCATCGCATCGCATCGCATGGCATCGCGTCTGTCCACAGCTCACACCGCGCCGCATTGAGGATCCTACCCTTTTAGAGGAGCAGCACGAATTACGCGGAACACAGTGCGTAAAACCCACAGCCGAGGCTTCATTGTGACTGCGCTTCAGAGCATTCAGGTTCGAGTTTGGTGAAGCATGCTTCCACAAATAAGATAAAGGAGATGTAAAATCAAGGTACAAATATGTGGTTTGAGTGTAGTTTTCTCTTatgtttgctttaaaaaaagactaCTATTTGTGTTAAAGAAGGGTTTAGCTAAGTGGTTTGTAAGCTGATCTATACGACAAGCTCTGCCTTCTTGTGGACGTCTGCAAGAAGGACATGTATCTGAAACGCACAAGACAATGTACCAAAGTAACATATTCaggattcgcaaaaatgtagacagcgccctctagctAATTTCTCAAATGAAACATGCAGAGAAACTTACCCAGAGCAATGAATTTTACGCTTCACAAAAATGTTTGGTTGCTCACTTTGTACAGTGTTGTGCTTGTGCTGCATGTTCGAGTTCGGTGCAGCACGCTTCTACAAAAGTGATAAAAGCACTGTACAATTAAGGTAAAACTACATGATATCAGTGCACTTTTCTTTTacgtttgcttttaaaaacactattatttGTGTTTAGAGAAGAGTTTAGCTCAGTGGTTTGCTAGCTGATCTGTACAACAAGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065257 True 807 lncRNA 0.45 2 56954940 57108188

Neighbor

gene id symbol gene type direction distance location
XLOC_033248 cdh22 coding downstream 77574 56638688 ~ 56877366 (-)
XLOC_033245 NA coding downstream 336383 56330271 ~ 56618557 (-)
XLOC_033247 CR388191.1 coding downstream 415815 56539009 ~ 56539125 (-)
XLOC_033246 NA coding downstream 565480 56387454 ~ 56389460 (-)
XLOC_033244 gcnt7 coding downstream 843111 56097971 ~ 56111829 (-)
XLOC_033250 NA coding upstream 137 57108325 ~ 57122910 (-)
XLOC_033251 CABZ01034962.1 coding upstream 155322 57263510 ~ 57263645 (-)
XLOC_033252 znfx1 coding upstream 292990 57401178 ~ 57426097 (-)
XLOC_033253 ddx27 coding upstream 328126 57436314 ~ 57476465 (-)
XLOC_033254 snrpb coding upstream 370149 57478337 ~ 57485411 (-)
XLOC_033243 NA non-coding downstream 881014 56061721 ~ 56073926 (-)
XLOC_033242 NA non-coding downstream 916123 56009178 ~ 56038817 (-)
XLOC_033256 NA non-coding upstream 512717 57620905 ~ 57621869 (-)
XLOC_033257 CU693502.1 non-coding upstream 522226 57630414 ~ 57631164 (-)
XLOC_033259 CABZ01087330.2 non-coding upstream 661354 57769542 ~ 57769658 (-)

Expression


Co-expression Network