XLOC_033250



Basic Information


Item Value
gene id XLOC_033250
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 57108325 ~ 57122910 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064765
TTCAAGTTCAACAGTCCAAAATCTGAGCCATACAGGTAAAAGTTTGCGTCAAGGATGAACAGAATCAGCGGAAACGGAAAGAGAAAGCGATCTGTTATGATTTCAGATACGTGACGCTTCTGTCAGTTCATATTTGCGCTTTATTTTGCTAATGTTTGAGTTTCCCTTGAGGCTGACTGCAATGCAAGGTTTGCTGAATTTCAAACACCACTTACTTTGAGAGATTACGGACTCCACGGTTTGAACAACAATATACACATGTAATATCCAGAAGCTCTTTCTGTAGTCAGCGTTTCCCCAAGACAAGATATTTAAGGCTTCAGAGAAGAGCGAGGGATGAAATATGACAAGCAAATTCATGCCAGACAATGATGGATGAACGGCATCAGCAAGTGAAGGAAGACTTGCTGTACAAAAACATGTATTTGCAGTGTAAACACCTTGACGTGAAAGAAAAATATGAATGCGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064765 True 469 lncRNA 0.40 3 57108325 57122910

Neighbor


gene id symbol gene type direction distance location
XLOC_033249 NA coding downstream 137 56954940 ~ 57108188 (-)
XLOC_033248 cdh22 coding downstream 230959 56638688 ~ 56877366 (-)
XLOC_033245 NA coding downstream 489768 56330271 ~ 56618557 (-)
XLOC_033247 CR388191.1 coding downstream 569200 56539009 ~ 56539125 (-)
XLOC_033246 NA coding downstream 718865 56387454 ~ 56389460 (-)
XLOC_033251 CABZ01034962.1 coding upstream 140600 57263510 ~ 57263645 (-)
XLOC_033252 znfx1 coding upstream 278268 57401178 ~ 57426097 (-)
XLOC_033253 ddx27 coding upstream 313404 57436314 ~ 57476465 (-)
XLOC_033254 snrpb coding upstream 355427 57478337 ~ 57485411 (-)
XLOC_033255 itcha coding upstream 368884 57491794 ~ 57539141 (-)
XLOC_033243 NA non-coding downstream 1034399 56061721 ~ 56073926 (-)
XLOC_033256 NA non-coding upstream 497995 57620905 ~ 57621869 (-)
XLOC_033257 CU693502.1 non-coding upstream 507504 57630414 ~ 57631164 (-)
XLOC_033259 CABZ01087330.2 non-coding upstream 646632 57769542 ~ 57769658 (-)
XLOC_033260 NA non-coding upstream 664810 57787720 ~ 57790025 (-)

Expression



Co-expression Network