Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493700 |
| gene name | LOC106564887 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 30731077 ~ 30781553 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| axin-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036949692.1 | False | 4773 | mRNA | 0.51 | 10 | 30731077 | 30749570 |
| XM_036949693.1 | False | 4527 | mRNA | 0.52 | 10 | 30731077 | 30749875 |
| XM_036949694.1 | False | 4388 | mRNA | 0.52 | 10 | 30731077 | 30781553 |
| TU1646529 | False | 1952 | lncRNA | 0.45 | 2 | 30731108 | 30735586 |
| TU1646537 | False | 1923 | lncRNA | 0.44 | 3 | 30731108 | 30735586 |
| TU1646535 | True | 871 | TUCP | 0.50 | 2 | 30732189 | 30735586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493696 | LOC106564971 | coding | downstream | 105214 | 30624949 ~ 30625863 (-) |
| LOC110493695 | LOC106564888 | coding | downstream | 110035 | 30563150 ~ 30621042 (-) |
| LOC110493694 | ccdc40 | coding | downstream | 168130 | 30556732 ~ 30562947 (-) |
| LOC110493693 | LOC106564890 | coding | downstream | 182315 | 30536089 ~ 30548762 (-) |
| LOC110493691 | LOC106564893 | coding | downstream | 311867 | 30413145 ~ 30419210 (-) |
| LOC110493703 | LOC106564885 | coding | upstream | 145695 | 30927248 ~ 30933785 (-) |
| LOC110493702 | LOC106564884 | coding | upstream | 152617 | 30934170 ~ 30937569 (-) |
| trnaa-ugc-131 | NA | coding | upstream | 328842 | 31110395 ~ 31110470 (-) |
| LOC110493160 | LOC106564877 | coding | upstream | 497347 | 31278900 ~ 31340762 (-) |
| LOC110493707 | psd12 | coding | upstream | 559867 | 31341420 ~ 31347781 (-) |
| G1437845 | NA | non-coding | downstream | 14172 | 30716693 ~ 30716905 (-) |
| G1437842 | LOC107579696 | non-coding | downstream | 16622 | 30713787 ~ 30714455 (-) |
| G1437839 | NA | non-coding | downstream | 20828 | 30710013 ~ 30710249 (-) |
| G1437799 | NA | non-coding | downstream | 69619 | 30661117 ~ 30661458 (-) |
| G1437738 | NA | non-coding | downstream | 155577 | 30493729 ~ 30575500 (-) |
| G1438303 | NA | non-coding | upstream | 2820 | 30784373 ~ 30784583 (-) |
| G1438308 | NA | non-coding | upstream | 7440 | 30788993 ~ 30789207 (-) |
| G1438309 | NA | non-coding | upstream | 7766 | 30789319 ~ 30789575 (-) |
| G1438313 | NA | non-coding | upstream | 10105 | 30791658 ~ 30791950 (-) |
| G1438316 | NA | non-coding | upstream | 12731 | 30794284 ~ 30794621 (-) |
| G1437609 | NA | other | downstream | 262305 | 30467323 ~ 30468772 (-) |
| G1437507 | NA | other | downstream | 488114 | 30241450 ~ 30243706 (-) |
| G1437411 | NA | other | downstream | 616954 | 30050602 ~ 30114123 (-) |
| LOC110495137 | LOC106564911 | other | downstream | 787347 | 29926378 ~ 29979179 (-) |
| G1436694 | NA | other | downstream | 1118469 | 29612252 ~ 29612608 (-) |
| G1438834 | NA | other | upstream | 798714 | 31580267 ~ 31585322 (-) |
| G1439068 | comd1 | other | upstream | 942264 | 31723817 ~ 31742348 (-) |
| G1440683 | LOC106606817 | other | upstream | 2408282 | 33189835 ~ 33194275 (-) |
| G1440711 | NA | other | upstream | 2457068 | 33238621 ~ 33252379 (-) |
| G1438274 | NA | non-coding | upstream | 14581 | 30750167 ~ 30750371 (-) |
| G1438277 | NA | non-coding | upstream | 17511 | 30753097 ~ 30753329 (-) |
| G1438280 | NA | non-coding | upstream | 19042 | 30754628 ~ 30754841 (-) |
| G1438281 | NA | non-coding | upstream | 19471 | 30755057 ~ 30755309 (-) |
| G1438282 | NA | non-coding | upstream | 19802 | 30755388 ~ 30755604 (-) |
