LOC118940650


Basic Information

Item Value
gene id LOC118940650
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 31516308 ~ 31516435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037237.1
ACCTGTATCGAAAGTGACTATGGCATGACTGTTGCCATTGTCATTGATAGTACAGGAACAGTGATCTGAAAGCTTTTCCCGTGTTTGTTGGAATAACTGTTCCTGTCAAACCCTGTGTCTTTCTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037237.1 True 128 mRNA 0.41 1 31516308 31516435

Neighbor

gene id symbol gene type direction distance location
LOC110493161 LOC106564864 coding upstream 14250 31449016 ~ 31502058 (+)
LOC110493711 nol11 coding upstream 70698 31435446 ~ 31445610 (+)
LOC110493710 LOC106564871 coding upstream 82350 31353482 ~ 31433958 (+)
LOC110493706 LOC106585672 coding upstream 238484 31256900 ~ 31277824 (+)
LOC110493705 LOC106564880 coding upstream 270725 31214930 ~ 31245583 (+)
LOC118940685 NA coding downstream 891 31517326 ~ 31517450 (+)
LOC118940684 NA coding downstream 2273 31518708 ~ 31518842 (+)
LOC110493716 LOC106564869 coding downstream 33965 31550400 ~ 31565714 (+)
LOC110493717 LOC106564867 coding downstream 62212 31578647 ~ 31585186 (+)
LOC110493718 LOC106564865 coding downstream 77827 31594262 ~ 31608502 (+)
G1438264 NA non-coding upstream 2365 31513713 ~ 31513943 (+)
G1438260 LOC106564870 non-coding upstream 6449 31509271 ~ 31509859 (+)
G1438258 NA non-coding upstream 7986 31508026 ~ 31508322 (+)
G1438254 NA non-coding upstream 36584 31479501 ~ 31479724 (+)
G1438252 NA non-coding upstream 38335 31477769 ~ 31477973 (+)
G1438267 NA non-coding downstream 9283 31525718 ~ 31526031 (+)
G1438782 NA non-coding downstream 11509 31527944 ~ 31528262 (+)
G1438784 NA non-coding downstream 11965 31528400 ~ 31528659 (+)
G1438791 NA non-coding downstream 16996 31533431 ~ 31533749 (+)
G1438815 NA non-coding downstream 72255 31588690 ~ 31588938 (+)
G1437911 LOC106564885 other upstream 582724 30927247 ~ 30933584 (+)
G1437734 NA other upstream 850301 30665171 ~ 30666007 (+)
G1437183 LOC106564893 other upstream 1101374 30410743 ~ 30414934 (+)
LOC110493688 LOC106564992 other upstream 1120658 30390554 ~ 30395746 (+)
G1436967 NA other upstream 1478245 30033900 ~ 30038063 (+)
G1438880 NA other downstream 186059 31702494 ~ 31705164 (+)
G1438941 LOC106564856 other downstream 390087 31906522 ~ 31907498 (+)
LOC110493164 LOC106564854 other downstream 457005 31973440 ~ 31976221 (+)
ero1b LOC106586106 other downstream 857180 32352949 ~ 32378308 (+)
rbm34 LOC106564828 other downstream 1083801 32562173 ~ 32662021 (+)

Expression


Co-expression Network