XLOC_033256


Basic Information

Item Value
gene id XLOC_033256
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 57620905 ~ 57621869 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065258
tttatatttaaatcTATATAATCTGTATAATTATATTTCAGTCTTTTCACAATTAAACACAAGGCATTTTCAATCATTGCAGTTTCTGAGTATAATTCAgtgagaaaatgaatgatttgtgtGAACTAGTCCtctaaaacagtGTTTACAGAGAAATGACAGGACTGTACATCTCCATCAAAAGTCTATTCTATCCACAAACTGCTCTTGAGAAATAACCTGGCTGACACTATAAAACATCTCCTAAACGCATGCAGTTTCATGTTCCGGTATCCAGAGGAGTAAAGATGACCTTAAAGGTGTTGCAGATCTTTTTTGCTTTAATTATGGTCTTGTTTTTCTTCTTGATCGACTGAATCTGCTTCAAAGCTACCGGCTTGACAAGCTTCATCACAGAATGCAGCaaattatgcagtttattttatatacatgcgAGGAATTGTACAGACATGCCTGTAGTGTCGAGGATGAACACAATTCAGAACTGAAGAGTCGATTCAATCTGAAGTCAACTGGTAATCGAGGAAATTACAATCTCAAACAAATTCAATACAAGCACTGAGGAATTTCATTAGTTTCACACACTAAGCTCCAAAACATACACATATCTTTGACTAATTATGCCTATTTATTCCCTGATCCattttttatttacctatttatttacaCAACATTAAACTTTTGAAACAAGCCatcaaaactattaaaaattaaatatttaatcaatGTGCATTAGAACTAACTTAACATAATt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065258 True 754 lncRNA 0.32 2 57620905 57621869

Neighbor

gene id symbol gene type direction distance location
XLOC_033255 itcha coding downstream 81764 57491794 ~ 57539141 (-)
XLOC_033254 snrpb coding downstream 135494 57478337 ~ 57485411 (-)
XLOC_033253 ddx27 coding downstream 144440 57436314 ~ 57476465 (-)
XLOC_033252 znfx1 coding downstream 194808 57401178 ~ 57426097 (-)
XLOC_033251 CABZ01034962.1 coding downstream 357260 57263510 ~ 57263645 (-)
XLOC_033257 CU693502.1 coding upstream 8545 57630414 ~ 57631164 (-)
XLOC_033258 cbfa2t2 coding upstream 12491 57634360 ~ 57722862 (-)
XLOC_033259 CABZ01087330.2 coding upstream 147673 57769542 ~ 57769658 (-)
XLOC_033260 NA coding upstream 165851 57787720 ~ 57790025 (-)
XLOC_033261 tox2 coding upstream 278368 57900237 ~ 58149165 (-)
XLOC_033250 NA non-coding downstream 497995 57108325 ~ 57122910 (-)
XLOC_033249 NA non-coding downstream 512717 56954940 ~ 57108188 (-)
XLOC_033247 CR388191.1 non-coding downstream 1081780 56539009 ~ 56539125 (-)
XLOC_033246 NA non-coding downstream 1231445 56387454 ~ 56389460 (-)
XLOC_033262 NA non-coding upstream 459766 58081635 ~ 58082635 (-)
XLOC_033263 NA non-coding upstream 1048836 58670705 ~ 58672580 (-)
XLOC_033245 NA non-coding downstream 1002348 56330271 ~ 56618557 (-)

Expression


Co-expression Network