LOC110495166


Basic Information

Item Value
gene id LOC110495166
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32423006 ~ 32425262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949743.1
TCTGATGGCTATAGGTGAGAGTCATTAACAATATGAACAATCCATTACTAATTATCCATCTTTAATGTCAATGAAGACGTGGGAGGGGCAATCAATTGTGGGGGCAGTAGTCTAATTATAATATCTAAACCGAAGTGGGTCTGGGTATGGTGTATAAAGTCCCCTCTGGTGGGATCGAATTCAGACGAGTCTTTCTGCAGGAGAAGAGCCGTGCGTGACCTGTAAAAAAGAAGCGTGCGTAATTTACAATGGCGAAATGGGAAATGCGAATGGACGTTCTAAAATGTTTGGCGGTGCTTGAGCTGGATGACATGGATTCAGACGCAAGGGGGGAACTTGATGAGATGTATCAAGAGATCTATGATGATAAATATGGTATTTTTTCAGTAGATTCCGATTCTGACAGTGAGACGTATGAGATCCCTCCCAGGGTGCCAGCGGCACCACAACGCAATCAGCAAAACTCCCGCAGTTGCTACAGTCAACATGGGCGCAAAAAAGCCCCTACGTTGCCCACCGTGGAGCCGTCATcaactgagatagagagagataatactGGGGTGGACGGCACAGTTTGGGTGAAACAGCCTGTTGGTAACGCCACGGGTCGATTATTAACACAGAACGACACCAGAGTGGAATCAGGCCCTACACCATTTGCAAAAGACAGAATCGACGGTGCCTACGCCAGCTTTCATTGTTTGTGTGACATGGAGATGTTGCAGCGCATCAGGGACTGTACTGTGGCTGAGGCGCACCGGGTGCAAGGAAAGAATAAAACATGGGACTTGTCTGTGGAGGAATTGGAAGCATTCATTGCGGTCCTTTATGTCCGTGGGCTACACGGCAATAGACGAGCGTCTTTGGATGACTACTGGTCATgtttaaaattagatttttttcgaGACACCATGCAAATGGACCGCTTCACAGAAATCTTGCGGTACCTGCGTTTTGACACCAGAGAGATCAGAAGCCCCCGGACATATTCGAACAAATTCGCCGTGGTCTCAGAAGTTTGGAACGCGTTTGTACGGAACTGTATTGCATGTTACAAGCCAGGGTTGAACATCACTGTTGAGGAGCAACGGTTCCTTTCAAGTGGAGAGGTCATCAAGTTTTCGTTGATCGCTGACGTAGACAGCAAGTACGTGCTAAATGTCATTCCTTATATCGTTCCTTATTCGGGGGAAGATGAATCTCAGAAGCCTGAAAatgtggcattgaagcttgtgGAACCTTACCTCGGTGCGGGGAGAACGGTCACTACGGACAAGTTCTGCACATCCCTGCCATTAGCAAATAAGTTGATTGCCAACAAAACCAACTTGGTCGGGGCAGTGAGTCATTGCGGACGAGAGCTGCCTCCCGTGATGCGTAATCAGACACAGACAAAGCTATACTCCACTACCGTGCTAAAGCATGACAAAGCAACCCTTACGGTTTACAGAAGTAACCCAAGAAAGAACGTCTGTATTCTGAGCACTATGCACCCGACTGTCGCCATCGGGAACGACCGAACGAGAGAACCGGAGACCGTGACGTTCTATAATAGCAACAGGGTTGATGTAGATACGATGACAAGAGAGCGTACGGTGGAGGTTGTGACAGGGTTGGAGAAAGGAGGTTCACACCGCTGGCCCCTTGCGGTATTCTTCAACCTTCTTGACCTGGCTGCAATCAACGCATATGTTTTGTTCACGCAATGCACCGCTAAGACAGTGCCAACGAGGGATTTCATCATGGATCTGGCATTCGAGCTTCGCGAGAAGCACATGAGGGCCAATGCCGCACcgcctcctcccctcccacccatccaggacacaGTCTGTGAAACGAAGACACACAGCAGGGTGCGCAGATCGACACGGAACAAGGCTCCTGAAAGCTGTGGATAGTGCAACGGACTTGCTTGTGGCTCTTGCGCACGCAAATATCCAGAACAACAGAAGACGAGAGATTAATTCATGCGTTAGGCTAAAGGCGCATATCCCAAAGGAGACTCGGTTGTTAATTAACTGGAGTCTTTGTTATAGCATGGATATATTGCCACTAATTCTCCTGTATGCATGTAAAGTTTCAACATTGTGTTTTCACCCTATCAATTGTGTTACAAATAAAATACAGAGACTTGA

Function

NR:

description
uncharacterized protein LOC110495166

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949743.1 True 2135 mRNA 0.48 2 32423006 32425262

Neighbor

gene id symbol gene type direction distance location
ero1b LOC106586106 coding upstream 45823 32352949 ~ 32378308 (+)
LOC110493741 LOC106564836 coding upstream 82747 32330091 ~ 32340259 (+)
LOC110493739 LOC106564840 coding upstream 110367 32281680 ~ 32312639 (+)
aplf aplf coding upstream 154795 32252425 ~ 32268211 (+)
etaa1 LOC106564845 coding upstream 248295 32170305 ~ 32174711 (+)
LOC110493168 NA coding downstream 14473 32439735 ~ 32441792 (+)
LOC110493746 LOC106564833 coding downstream 22233 32447495 ~ 32478576 (+)
LOC110493748 LOC106564832 coding downstream 73784 32499046 ~ 32560510 (+)
rbm34 LOC106564828 coding downstream 229168 32562173 ~ 32662021 (+)
strn LOC106564825 coding downstream 420958 32846220 ~ 32933183 (+)
G1439440 NA non-coding upstream 70777 32351977 ~ 32352229 (+)
G1439438 NA non-coding upstream 73691 32348953 ~ 32349315 (+)
G1439402 ru2b non-coding upstream 141548 32274966 ~ 32281458 (+)
G1439367 NA non-coding upstream 212205 32210573 ~ 32210801 (+)
G1439346 NA non-coding upstream 240994 32179767 ~ 32182012 (+)
G1439706 NA non-coding downstream 19076 32444338 ~ 32444788 (+)
G1439717 NA non-coding downstream 55325 32480587 ~ 32482128 (+)
G1439716 NA non-coding downstream 62375 32487637 ~ 32491941 (+)
G1439718 NA non-coding downstream 228424 32653686 ~ 32654194 (+)
LOC110493164 LOC106564854 other upstream 446785 31973440 ~ 31976221 (+)
G1438941 LOC106564856 other upstream 515508 31906522 ~ 31907498 (+)
G1438880 NA other upstream 717842 31702494 ~ 31705164 (+)
G1437911 LOC106564885 other upstream 1489422 30927247 ~ 30933584 (+)
G1439962 LOC106564826 other downstream 287598 32712860 ~ 32766707 (+)
G1440066 NA other downstream 371836 32797098 ~ 32797432 (+)
G1440162 NA other downstream 526538 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 1098937 33524199 ~ 33524534 (+)

Expression


Co-expression Network