LOC110493168


Basic Information

Item Value
gene id LOC110493168
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 32439735 ~ 32441792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567457.2
GGAGAAGAGCCGTACGTGACCTGTAAAAAAGAAGCGTGCGTAATTTACAATGGCGAAATGGGAAATGCGAATGGACGTTCTAAAATGTTTGGCGGTGCTTGAGCTGGATGACATGGATTCAGACGCAAGGGGGGAACTTGATGAGATGTATCAAGAGATCTATGATGATAAATATGGCATTTTTTCAGTAGATTCCGATTCTGACAGTGAGACGTATGGGATCCCTCCCAGGGTGCCAGCGGCACCACAACGCAATCAGCAAAACTCCCGCAGTTGCTACAGTCAACATGGGCGCAAAAAAGCCCCTACGTTGCCCACTGTGGAGCCGTCATCAATAGAGCGAGATAATACGGGGGTGGACGGCACAGTTTGGGTGAAACAGCCTGTTGGTAACGCCACGGGTCGATTATTAACACAGAACGACACCAGAGTGGAATCAGGCCCTACACCATATGCAAAAGCCAGAATCGACGGTGCCTACGCCAGCTTTCATTGTTTGTGTGACATGGAGATGTTGCAGCGCATCAGGGACTGTACTGTGGCTGAGGCGCACCGGGTGCAAGGAAAGAATAAAACATGGGACTTGTCTGTGGGGGAATTGGAAGCATTCATTGCGGTCCTGTATGTCCGTGGGCTACACGGCAATAGACGAGCGTCTTTGGATGGCTACTGGTCATGTTTAAAATTTGATTTCTTTCGAGACACCATGCAAATGGACCGCTTCACAGAAATCTTGCGGTACCTGCGTTTTGACACCAGAGAGATCAGAAGCCCCCGGACATATTCGAACAAATTCGCCGTGGTCTCAGAAGTTTGGAACGCGTTTGTACGGAACTGTATTGCATGTTACAAGCCAGGGTTGAACATCACTGTTGAGGAGCAACGGTTCCTTTCAAGTGGAGAGGTCATCAAGTTTTCGTTGACCGCTGACGTAGACAGCAAGTACGTGCTAAATGTCATTCCTTATATCGTTCCTTATTCGGGGGAAGATGAACCTCAGAAGCCTGAAAatgtggcattgaagcttgtgGAACCTTACCTCGGTGCGGGGAGAACGGTCACTACGGACAAGTTCTGCACATCCCTGCCATTAGCAAATAAGTTGATTGCCAACAAAACCAACTTGGTCGGGGCAGTGAGTCATTGCGGACGAGAGCTGCCTCCCGTGATGCGTAATCAGGCACAGACAAAGCTATACTCCACTACCGTGCTAAAGCATGACAAAGCAACCCTTACGGTTTACAGAAGTAACCCAAGAAAGAACGTCTGTATTCTGAGCACTATGCACCCGACTGTCGCCATCGGGAACGACCGAACGAGAGAACCGGAGACCGTGACGTTCTATAATAGCAACAGGGTTGATGTAGATACGATGACAAGAGCGCGTACGGTGGAGGTTGTGACAGGGTTGGAGAAAGGAGGTTCACACCGCTGGCCCCTTGCGGTATTCTTCAACCTTCTTGACCTGGCTGCAATCAACGCATATGTTTTGTTCACGCAATGCACCGCTAAGACAGTGCCAACGAGAGATTTCATCATGGATCTGGCATTCGAGCTTCGCGAGAAGCACATGAGGGCCAATGCCGCACcgcctcctcccctcccacccatccaggacacaGTCTGTGAAACGAAGACCCACAGCAAGGTGCGCAGATCGACACGGAACAAGGCTCCTGAAAGCTGTGGGTAGTGCAACGGATTTGCTTGTGGCTCTTGCGCACGCAAATATCCAGAACAACAGAAGACGAGAGATTAATTCATGCGTTAGGCTAAAGGCGCATATCCCAAAGGCACAATATACAGTCTCCAGTTAATTCACAACCGAGTCTTTGTTATAGCATGGATATATTGCCACTAATTCTCCTGTATGCATGTAAAGTTTCAACATTGTGTTTTCACCCTATCAATTGTGttacaaataaaatacaga

Function

NR:

description
uncharacterized protein LOC110495166

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567457.2 True 1933 mRNA 0.49 2 32439735 32441792

Neighbor

gene id symbol gene type direction distance location
LOC110495166 NA coding upstream 14473 32423006 ~ 32425262 (+)
ero1b LOC106586106 coding upstream 62552 32352949 ~ 32378308 (+)
LOC110493741 LOC106564836 coding upstream 99476 32330091 ~ 32340259 (+)
LOC110493739 LOC106564840 coding upstream 127096 32281680 ~ 32312639 (+)
aplf aplf coding upstream 171524 32252425 ~ 32268211 (+)
LOC110493746 LOC106564833 coding downstream 5703 32447495 ~ 32478576 (+)
LOC110493748 LOC106564832 coding downstream 57254 32499046 ~ 32560510 (+)
rbm34 LOC106564828 coding downstream 212638 32562173 ~ 32662021 (+)
strn LOC106564825 coding downstream 404428 32846220 ~ 32933183 (+)
LOC110493756 LOC106564824 coding downstream 533046 32974838 ~ 32984904 (+)
G1439440 NA non-coding upstream 87506 32351977 ~ 32352229 (+)
G1439438 NA non-coding upstream 90420 32348953 ~ 32349315 (+)
G1439402 ru2b non-coding upstream 158277 32274966 ~ 32281458 (+)
G1439367 NA non-coding upstream 228934 32210573 ~ 32210801 (+)
G1439346 NA non-coding upstream 257723 32179767 ~ 32182012 (+)
G1439706 NA non-coding downstream 2546 32444338 ~ 32444788 (+)
G1439717 NA non-coding downstream 38795 32480587 ~ 32482128 (+)
G1439716 NA non-coding downstream 45845 32487637 ~ 32491941 (+)
G1439718 NA non-coding downstream 211894 32653686 ~ 32654194 (+)
LOC110493164 LOC106564854 other upstream 463514 31973440 ~ 31976221 (+)
G1438941 LOC106564856 other upstream 532237 31906522 ~ 31907498 (+)
G1438880 NA other upstream 734571 31702494 ~ 31705164 (+)
G1437911 LOC106564885 other upstream 1506151 30927247 ~ 30933584 (+)
G1439962 LOC106564826 other downstream 271068 32712860 ~ 32766707 (+)
G1440066 NA other downstream 355306 32797098 ~ 32797432 (+)
G1440162 NA other downstream 510008 32951800 ~ 32956057 (+)
G1440890 LOC106564813 other downstream 1082407 33524199 ~ 33524534 (+)

Expression


Co-expression Network