LOC118940097


Basic Information

Item Value
gene id LOC118940097
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33767235 ~ 33768659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036699.1
ACTGGTGTTTGAATTATGTGCCGTGTGTGTTAGTCTCCTGACAAGCTTCAGCCTACAACATGGACCCAGCAGAGATCACCCAGATCAAGAATGTTGTAACCCACCAAGGAGCACTGCTGGGGCGGCAGCAAGAACAACTCTTCCAGATATCAGATCCCCTCCGGGCGCTTACCGACTCCCTCCAACCAAGGTCCAACCCCAACCCAGGAGGAGCCAATGCCCAAGTTTCATCACCCAGTGCTTAAGGCGTTGTTGTAGTTCCACCAGGGAACCTGCACTGGGAACCCAAGATCCCAGCCCTTGAGTGGTATGACATGCCCTGAGCTGACGGGAAACGAAAGGGCTTGCCAGGACAAGGGGAGACCCTGACGAGCTGTGCAGTCACCCCCGGCTACCCAGTCACCATCTCACTACCTGCAACCTTCCACTGGGACAACCGTCAGCACCAGATTCAAGCCTTCGTGGACTCCGGATAATTTTAATTGATCAATACTTCACCGGAGAATTACAAATCCCATGTGTGAAATGTCCCATCCCTCTGCAGATTCAAGCCCTCGATGGATGCACCATAAGGATCCGTCCAGGAATAACAGACCAAGCCTCCGGGAGGCCTTCAGTAAGAGGCAAGCCaccaccctccctcctcatcaTCCATACGACTGCGCCATAGAACTCCTCAGGATCTCATTACGGTATCTCTGAGcagtcaaattgccattgataaattGCAATTaggtttgttgtctgtagcttatgcaggcccataccataaccccacagccACCATGGACACTGTttcaatgttgacatcagcaaatcacTCACCCACACAGCGCCATACAAGtgatctgcagttgtgaggctggttgaaaatactgacaaattctctaaaatggctTACGGTAGAGAAAGTAACatgaaattatctggcaacaggtctggtgggaatgtggcattgtgttgataAAAATGTACTTTTCAGAATGGGtttctattgtccccagcacaaggtgcacctgtgtaaggatcatgctttataatcagcttcttgatatgccacatctgtcaggtggatggattatcttggcaaaggagaaatgctcactaacagggatgtgcacaaatttgtttacaacaTTCACATTTGAGCGGAATAAGCTTTTTctgcatatgaaacatttctgggatctttaacagtggcaagaaaaagtatgtgagcccttcggaattacctggatttctgcataaattgtaaataaaatttgatctgatcttca

Function

NR:

description
zinc finger protein 184-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036699.1 True 1277 mRNA 0.47 2 33767235 33768659

Neighbor

gene id symbol gene type direction distance location
LOC118940096 NA coding upstream 170933 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 182555 33583355 ~ 33584984 (+)
LOC110493762 LOC106564986 coding upstream 521270 33243976 ~ 33245965 (+)
LOC110493760 LOC106564819 coding upstream 690566 33069756 ~ 33076669 (+)
LOC110493759 LOC106564822 coding upstream 729242 33035998 ~ 33037993 (+)
LOC110493170 LOC108247247 coding downstream 54991 33823650 ~ 33825084 (+)
LOC110493766 LOC106564809 coding downstream 73679 33842338 ~ 33926454 (+)
LOC110493767 LOC106564808 coding downstream 168875 33937534 ~ 33970100 (+)
LOC110493768 hebp1 coding downstream 215001 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 227509 33996168 ~ 34034123 (+)
G1441004 NA non-coding upstream 42285 33724077 ~ 33724950 (+)
G1440967 NA non-coding upstream 125779 33633590 ~ 33641456 (+)
G1440966 NA non-coding upstream 127196 33629921 ~ 33640039 (+)
G1441203 NA non-coding downstream 3103 33771762 ~ 33772286 (+)
G1441204 NA non-coding downstream 4620 33773279 ~ 33773494 (+)
G1441216 NA non-coding downstream 20682 33789341 ~ 33789580 (+)
G1441218 NA non-coding downstream 22004 33790663 ~ 33790891 (+)
G1441224 NA non-coding downstream 29774 33798433 ~ 33798668 (+)
G1440890 LOC106564813 other upstream 242701 33524199 ~ 33524534 (+)
G1440162 NA other upstream 811178 32951800 ~ 32956057 (+)
G1440066 NA other upstream 969803 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1000528 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1156894 32562173 ~ 32662021 (+)
G1441315 NA other downstream 207534 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 521382 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1400239 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1905305 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1978213 35746872 ~ 35751790 (+)

Expression


Co-expression Network