LOC110493767 (LOC106564808)


Basic Information

Item Value
gene id LOC110493767
gene name LOC106564808
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33937534 ~ 33970100 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568237.2
TCATTCAAAAATATTCGCTGTGGATGCTGGGAGATCAATATCCATGGAAGACATTTTGGATTTAAAATAAGCTCCGTTGGCAACACATTTATCATTGCGGTCGCCCTGATATTTATTTAGAATGTACCGTCAAAGAGTTTGTTTGTCAGTTGTGCGCAATGAAATGGCGTCgttcttgtaaaaaaaaatcaagcATTTTCCCGAACCAAATCGCCGTGCTCCTCTGCGAATTCTGTTGGGATAGGTTTCTTGCTGTTGCATGTACATCGAGAAGGCTCCTATAGTTCCTTGCTGTCCTACGAGGAATTAACCAATTTAGTGTATTAGGTCCTAGGTCCACTAGGCAATGTCAATCATGGTGTACCCCAGGGAAGACCGTCTGGAGAAGCTGTCCCAGGAGGAgatcatctccagcaccaagcTGGTGATCCAGGGCCTGGAGGCGCTGAAGAGCGAGCACAATTCCATCTTGCACAGCCTGCTGGAGACCATCCGCTGCCTGAAGAAGGACGAGGAGGCCAACCTGGTGCACGAGAAGTCCAGCCTGCTGCGCAAGTCAGTGGAGATGATCGAGCTGGGGCTGGGCGAGGCGCAGGTGATGATGGCCCTGTCTGCCCACCTGAACGCTGTGGAGTCGGAGAAGCAGAAGCTGCGTGCCCAGGTACGTCGACTGTGCCAAGAGAACCAGTGGCTGCGGGACGAGCTGGCGGGCACCCAGCAAAAGCTGCAGAAGAGCGAACAGAGTGTGGCCCAgctggaagaggagaagaagcaTCTGGAGTTCATGAATCAGCTGAAGAAGTACGACGAGGATGTGTCCCCTACTgaggagaaagatggagagcCTCCTAAAGATACACTGGACGACCTCTTCCCCAATGATGAGGAGGAAAACAGTCAAGGAATGCCGCACCAGCATAACAGCGCAGCGGTGGCCGCTGCCCAGCAGGGTGGCTATGAGATCCCAGCCCGCCTGAGGACCCTCCACAACCTGGTTATCCAGTACGCCTCCCAGGGCCGCTACGAGGTGGCCGTGCCCCTCTGCAAACAGGCCCTGGAGGACCTGGAGAAGACATCCGGACACGACCACCCTGACGTGGCCACCATGCTCAACATCCTGGCCCTGgtctacaggGACCAGAACAAATACAAGGAGGCGGCTCACCTGCTCAACGACGCACTGTCTATCCGGGAGAAAACCCTTGGGAAAGACCACCCTGCGGTGGCTGCGACACTGAACAATCTGGCAGTGCTGTATGGAAAGAGGGGGAAGTACAAGGAAGCTGAGCCCCTTTGCAAGAGGGCTCTGGAGATCAGAGAGAAGGTGCTGGGCAAGGACCATCCTGATGTGGCCAAGCAGCTGAACAACCTGGCCCTGCTGTGCCAGAATCAGGGCAAGTACGAGGAGGTGGAGTACTACTACTGCCGTGCCCTGGAGATCTACGAGCGCCGGCTGGGCCCTGACGACCCCAACGTGGCCAAGACCAAGAACAACTTGGCTTCGTGTTACTTGAAGCAGGGGAAGTACAAGGAGGCGGAAATCCTTTACAAAGAGATCCTCACCCAAGCTCACGAGAAGGAATTTGGATCCGTGGATGCTGAGAACAAACCCATCTGGATGCATGCTGAGGAGCGGGAGGAGTGCaagAGCAAAGACGGCTATGGAGATTATGGCGGCTGGTATAAAAACTGCAAGGTGAACAGcCCCACTGTCAACACCACGCTACGTAATCTGGGAGCTCTGTACCGCCGGCAAGGCAAGATGGAGGCCGCTGAGACCCTGGAGGAGTGTGCCTTGAGGTCCCGAAAACAGgGTGGGGTGGAGctgcagagagacggagacaggaggaggagcagggagagTCTGAGCAGCGTAAAATATGAGAGCCCCTCCGAAGCAGGGGAGGACGGCAGCGTGGACTGGAACGGGGCCTAAATCAGCGGGATGACCTTCCTCCGCCTCACTCTTCTCAACCAATCAAAATCAAGCCAATCGAATCAAAATGGATGCCCCTCGTCATTTCCTCTGTGTGAAGCCTCTTCTAATCTCTCATGAAGGACTCCTCCTTCATCCCCACTCCAAATCCTGGCCCAAACTGATTATACCTTTCACCGCCCCCTCTACGCATGCTCTCTATCTTCTTCTACACTCTACCCCTCGTCTCCTTGTCTCTTGCCCTCTTCTTGCGTTTTCTTTATACCTCATTTTCTTTCTAGTTATCTTCCTATCTCATTCATGCCCACTGATTTCTCTCATCGTTCTGCATCATCTTTCAGCCCTTCTCttcatctatccatctctccccctctgtccctccctttctcttgCTGTGTCATCACTTGTATAGTGTGTATGATATTCTAACCAATAAGAGATGTTGGACAGTGGCACCAGAGGCCAATTGAACACTGGAAACTTAACTATCAAAGCTTCGGATTGGTTGTTTGATTTTCCCTCTTCTGTTCTCCTTGTATGCAAATATGATTGTTTTTAAATTGATCTTCCAACAAGCACAGTCGCACAGTTATAACGGCATCAATTATTAGTCCACTACCAAATGAGACCAGTCAGAATTTTTATCCCGTTTTGTTATCGCTATAACATTATTTGCCACTGAAGAGCAACTAGCTACAGTAGTGGTTTTTATTTTGCTGCAGCCAGCTTTTTGCCCTGACGTTTGACCAGGATTGAACTACCTAGGTGCCTTTTTTTTCACTTATTTTGTTTTTCACTTATTTTGTTATCTTGCTACTTGTTTTAAGTGTGACCATGACCCGTGTTAAATATGTATGCGTACTATTATGTTATATAGGAGGAAATGtaagaaaataaacaaataatgtGACACTATTATGATTCCAAGTCACGTCGCCACTTACAAGCACCTTTTGAGTTTACACATCGATTACTTGTGTTATTGAGATGTATATCTGTCTcctgttttattttgtttactTTGAAATAGTTTCTTATATAGCATAGTGTTTATCATAATGCTTATTTCTTTGCATTGTCCCTCTAAGCAATTGCTTAATATTTTaagccattattattattattattattattattattattattatatagccATAGGTTTAGGAATTATGGTATTGACTTTTTAAAGAGGAACAGCTTGCGAACTGTAGAATAAATGTTTGAATTTAATGGCATTTTGCAAATTGCTTCTCCAAACCCatcttgaaaaaaatatatataataatctgTAATTATGCTCCAAGCGAGATCTTGTTTCATGTTTTGAAGTAGCCATTGAAAAGGGACACAAACAGCAGATACACACAAATTAATATACACTCTGCCGCACAAAGTTGTTGTATTTGACTTTGTATTTTGTAAGCTTCCAAGTGAAATTTTGTGAGGTCCATTATTTGGTTTTACCTTGATGGTCCTCTTGTTGTTCCTCGCATAGCTCTCGCTCTTGTTATCCTCTCGTCTTAAAAGCCTACTTTACCCTGCCATGACGTAAGGCAGTCATAACAGCTTATGTTAGTTTATGACACCACTATGAATAGCCATGGCACACATGCAATTACCAAGGTTAGCTATCTTGTCAGCCAACAACCTAGTTACCTTGAACACAGTAACATGAGACCTAGCTGGTTGCTCAAAAGCTGTACGTTATAAATTGCCATGAGATTTTATGAATGCTGCTGATGACTATTGTTATGCTACGCTTTTAGCAGCTTAAAGATCGACTTTCGGTTGGGGATTGAAGTTGGGTGTGATCATATTTTGTGAGGCATCGTTGAACAGTTATGTTTCCTCACTGTAAAGATGTTTCAAACAACGCTGTTTCTTGAAATGTACTCACTGATGTCCACGACTTAACTGTCCCAGTTTCTTTTGTATTTCCCATGTTTAAGTCACTTTTAGTTTAGTTAGTATTAATATAGAATGAGGGGAAACAATGTATTTTAGTCTGTAGTACTAGTAACTAACCTTCGAGCTAGCCAGTCGTTTCAGCATTAGCCAACACCACCAAATTGAAGTTGCCTGTATGCCATGTAGTTACTCTAAGCACTTTAACGATGATATAATAACTCTGTTTCACAATCAGTGCAGGTATATACTCAATTATAGTAGATTTACAGATAATGGTTTAAAAGTGCATGTGCTATACCAAAACTGATGCGGTACTATGAGACTATTAGTTCAAGTAGTTCATGTATATTTTAAAGTAATTACGCTATTGTTACCGTATGAAAATGCAATTCCACTTAACTGTGGCATTTTAGCATCTCAGTGAACGCCGCAAACAGattaaatatacatatataaaaaTGAGCAGTAATTGTAGAGCCAAAGCAGTAGTAGTGGAGCTAGCCAATTCTGACACACTGGCTGGCCGGTAAGCCTATGTAGTGGAGCAATTTAGCTGTGTCATACTTTTTTTCATTGGTCCATCTGTTGAAAGTTGAGCTCTCCATTACTGGTTCTCCTCTCCCGGCATTGTGTAGGCCTACGCACACCCTCGCTTGTTGTGTTGTGATGAATGTGTCTCTTAACCTGGTTTGACATCGACTGAAAATAAAGACTTTCATTTTGGGCTTT
>XM_021568235.2
TCATTCAAAAATATTCGCTGTGGATGCTGGGAGATCAATATCCATGGAAGACATTTTGGATTTAAAATAAGCTCCGTTGGCAACACATTTATCATTGCGGTCGCCCTGATATTTATTTAGAATGTACCGTCAAAGAGTTTGTTTGTCAGTTGTGCGCAATGAAATGGCGTCgttcttgtaaaaaaaaatcaagcATTTTCCCGAACCAAATCGCCGTGCTCCTCTGCGAATTCTGTTGGGATAGGTTTCTTGCTGTTGCATGTACATCGAGAAGGCTCCTATAGTTCCTTGCTGTCCTACGAGGAATTAACCAATTTAGTGTATTAGGTCCTAGGTCCACTAGGCAATGTCAATCATGGTGTACCCCAGGGAAGACCGTCTGGAGAAGCTGTCCCAGGAGGAgatcatctccagcaccaagcTGGTGATCCAGGGCCTGGAGGCGCTGAAGAGCGAGCACAATTCCATCTTGCACAGCCTGCTGGAGACCATCCGCTGCCTGAAGAAGGACGAGGAGGCCAACCTGGTGCACGAGAAGTCCAGCCTGCTGCGCAAGTCAGTGGAGATGATCGAGCTGGGGCTGGGCGAGGCGCAGGTGATGATGGCCCTGTCTGCCCACCTGAACGCTGTGGAGTCGGAGAAGCAGAAGCTGCGTGCCCAGGTACGTCGACTGTGCCAAGAGAACCAGTGGCTGCGGGACGAGCTGGCGGGCACCCAGCAAAAGCTGCAGAAGAGCGAACAGAGTGTGGCCCAgctggaagaggagaagaagcaTCTGGAGTTCATGAATCAGCTGAAGAAGTACGACGAGGATGTGTCCCCTACTgaggagaaagatggagagcCTCCTAAAGATACACTGGACGACCTCTTCCCCAATGATGAGGAGGAAAACAGTCAAGGAATGCCGCACCAGCATAACAGCGCAGCGGTGGCCGCTGCCCAGCAGGGTGGCTATGAGATCCCAGCCCGCCTGAGGACCCTCCACAACCTGGTTATCCAGTACGCCTCCCAGGGCCGCTACGAGGTGGCCGTGCCCCTCTGCAAACAGGCCCTGGAGGACCTGGAGAAGACATCCGGACACGACCACCCTGACGTGGCCACCATGCTCAACATCCTGGCCCTGgtctacaggGACCAGAACAAATACAAGGAGGCGGCTCACCTGCTCAACGACGCACTGTCTATCCGGGAGAAAACCCTTGGGAAAGACCACCCTGCGGTGGCTGCGACACTGAACAATCTGGCAGTGCTGTATGGAAAGAGGGGGAAGTACAAGGAAGCTGAGCCCCTTTGCAAGAGGGCTCTGGAGATCAGAGAGAAGGTGCTGGGCAAGGACCATCCTGATGTGGCCAAGCAGCTGAACAACCTGGCCCTGCTGTGCCAGAATCAGGGCAAGTACGAGGAGGTGGAGTACTACTACTGCCGTGCCCTGGAGATCTACGAGCGCCGGCTGGGCCCTGACGACCCCAACGTGGCCAAGACCAAGAACAACTTGGCTTCGTGTTACTTGAAGCAGGGGAAGTACAAGGAGGCGGAAATCCTTTACAAAGAGATCCTCACCCAAGCTCACGAGAAGGAATTTGGATCCGTGGATGCTGAGAACAAACCCATCTGGATGCATGCTGAGGAGCGGGAGGAGTGCaagAGCAAAGACGGCTATGGAGATTATGGCGGCTGGTATAAAAACTGCAAGGTGAACAGcCCCACTGTCAACACCACGCTACGTAATCTGGGAGCTCTGTACCGCCGGCAAGGCAAGATGGAGGCCGCTGAGACCCTGGAGGAGTGTGCCTTGAGGTCCCGAAAACAGgGTGGGGTGGAGctgcagagagacggagacaggaggaggagcagggagagTCTGAGCAGCGTAAAATATGAGAGCCCCTCCGAAGCAGGGGAGGACGGCAGCGTGGACTGGAACGGGGATGGCAGTTGGGTTCTGAGGAGAGCAGGATCGATGGGGAAGCTCCGGGACGTCATACGGCGAAGCAGCGAGATGCTGGTGAAGAAACTACAGGGGAACGGTCCCCCCGACCCACGCAACCCCCATATGAAACGAGCTGCCTCTCTGAACTATTTGAACAAGAGAAGTGATGACGATGACTCCTTTCAGAGTCCAGCAGGTGGCAGGAGGCTAAGGCAGAGCAGGAACCTGAGTTCCAGTACTGTTGAGCTCTACAGTGGAACTGgaaactgaacacacacacactcccaacaGTTTTACCAAATATTATGTTTAATTCTAAACCAAAAATTCTGTAGTTTCCATTCCTACATTTAAACACTGTTTAATGTTATTGCTGATTTCTAGACATTGTATGAATTTTGTAGACTTTCTGTagaatacaaaaaatatatattgtaaaaatgtgCTTGGTTTTAATGTCATTGATATATTGTGAGATTAGACCGCGAGAATCTTTACTGCTTGGCTTAGTTTGATACAAATCCCCTTAAGGTGCTCTGTGCAATCAGACACCCAGGGCAGTATATTGTGGACAATAGTGTTTCCCATGGCGAACAAGCCTGGATCTATTATTCACTATACCCACAGCTTCCGAAAGCATGGTGGGTCAGTACTCTTCCCAAATCAGAGAGGATTATTATTTTCAAGAGCTGTTCAATTGAGCTATTACGCTTCTTTTTGCAGTGTTTTCTCCCCCTTTCCATAACCATGAAGATACTCGGTACTGTAGTTAAATAGTAATTAAGTCACGGAGATGTTATTCATGAATTTAGAATATAGAATCAAATATATCTGAGATTGAAAGGGGTACTTCACCTAATAAAAATGTACACAAAGAAAATA

Function

NR:

description
kinesin light chain 1-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005871 kinesin complex cellular_component
GO:0003777 microtubule motor activity molecular_function

KEGG:

id description
K10407 KLC; kinesin light chain

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568237.2 False 4573 mRNA 0.45 14 33937534 33963226
XM_021568235.2 True 2815 mRNA 0.51 16 33937534 33970100

Neighbor

gene id symbol gene type direction distance location
LOC110493766 LOC106564809 coding upstream 11080 33842338 ~ 33926454 (+)
LOC110493170 LOC108247247 coding upstream 112450 33823650 ~ 33825084 (+)
LOC118940097 NA coding upstream 168875 33767235 ~ 33768659 (+)
LOC118940096 NA coding upstream 341232 33593813 ~ 33596307 (+)
LOC118940095 NA coding upstream 352854 33583355 ~ 33584984 (+)
LOC110493768 hebp1 coding downstream 13560 33983660 ~ 33995716 (+)
LOC110493769 LOC106564807 coding downstream 26068 33996168 ~ 34034123 (+)
LOC110493770 LOC106585018 coding downstream 70161 34040261 ~ 34121223 (+)
LOC110493772 LOC106564803 coding downstream 159826 34129926 ~ 34132623 (+)
LOC110493775 LOC106564801 coding downstream 202976 34173076 ~ 34233684 (+)
G1441188 NA non-coding upstream 6310 33882512 ~ 33931224 (+)
G1441286 NA non-coding upstream 46042 33890743 ~ 33891492 (+)
G1441281 NA non-coding upstream 54387 33882865 ~ 33883147 (+)
G1441225 NA non-coding upstream 137138 33798975 ~ 33800396 (+)
G1441224 NA non-coding upstream 138866 33798433 ~ 33798668 (+)
G1441536 NA non-coding downstream 67840 34037940 ~ 34038151 (+)
G1441541 NA non-coding downstream 153068 34123168 ~ 34123495 (+)
G1441593 NA non-coding downstream 153823 34123923 ~ 34124147 (+)
G1441576 NA non-coding downstream 156220 34126320 ~ 34126633 (+)
G1441580 NA non-coding downstream 157621 34127721 ~ 34128226 (+)
G1440890 LOC106564813 other upstream 413000 33524199 ~ 33524534 (+)
G1440162 NA other upstream 981477 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1140102 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1170827 32712860 ~ 32766707 (+)
rbm34 LOC106564828 other upstream 1327193 32562173 ~ 32662021 (+)
G1441315 NA other downstream 6093 33976193 ~ 33976475 (+)
LOC110493778 LOC106564798 other downstream 319941 34290017 ~ 34317682 (+)
LOC110493802 LOC106564779 other downstream 1198798 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1703864 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1776772 35746872 ~ 35751790 (+)

Expression


Co-expression Network