LOC110493769 (LOC106564807)


Basic Information

Item Value
gene id LOC110493769
gene name LOC106564807
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 33996168 ~ 34034123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568239.2
tctccaaaCACCGGAAGCTTCTCATCCAAAGTGGGAGctaaggagagacagagggagaaaaaggGAAAGGCTACTTTCATTTAATAGTGTTGAAGGAATGGCATGTAGGCACATTTCTTCTTTGCATTTTCTTGTCATTATTTGAAATAATGGAATAGGTCCTACGTCTTCACGTTTACGAATTGCGCGTGCAACAGTCGTATCGTCATCGGACGACCACTAGACAAAGCAGTCGTTTATCGTTGCTCTTGTCGGAGTACTTTTTTAGAGGTCTTGTGAAACGCTGGTAGTTTTCGCGTTGACTGCCCTTGGTTTCGGGTCTCGTTTTCTTGTGCGAATGATTTAACGTAGTTGTGGCTGACTTTGCTTGAGTTCTATTATGGAGTTACCGTCCAcagaaaataaatgtttcacagagagTAACCTGAACTCGGCGAATAGGCGTAGACAAGGAGTCATGCCGACAATACACACCACTACTATCCTGTTTCTTATTTTCACCAAAGtTCTCACTGTTCACGCCGCCTCCTTCCACTTCACCAAGGAGCCCAAGTCCCAGGATGCCTTGCACGGCCGGAGTGCCATGTTACGCTGCGAGGTCAGCGATGCAGAGGGCGTGAGTTACAGCTGGCTGCAAAACGGCGATGCAGTGAACGACACAGAGCGCCGCTTTCGGGAGGGCGGCAACCTCAAGTTCACCGCTGTGGACCGCGTGCTGGACGCCGGGACCTTCCAGTGCCTGGCCACCAACAATGCCACAGGAGAAGAGGAGCGCTCCACGGAGGCGTCCTTCAACATTAAATGGCTAGAGAGTGGTGGGGTGACCCTGAAGGATCCTGCATCAGAGCAGGACATCGAGAGCTCTGCCCCTGTGACGTTCAGGTGCAACATTGATGGACACCCACGACCAACATGTCACTGGTACAGAGACGGCGTGCGCCTGCCGGAGAAGAGCCATCAGATCAACAACAAGGAGCGAACTCTGACCCTGCCCAGTGCCAGCCCAGACAACAATGGCCTCTACTATTGCTGTGCCAAAAATCCAGCCGGGCACGTGTGCAGCAATGCCAACTTCACCCTCAATATCATAGATAAGAGTTTCCCTCGTCCCGTGGTGGTTCCTGAGGACTTGGTGGTGATGAGGAACGAGGAGGCCCTCCTTAACTGCCTGTTCACTGCCGAGCCCCCTCCCACCCAAGAGTGGTACCACCAGGACGAGCTCGTCACCAACAAGTCCCGgtTGGTGATGTTGAACAATGGCTCCCTGCTCATCACCCAGGTGAAACCCAGAAACACTGGGCTCTACAAATGTGTGGCCAAAGGGCCCCGCGGACTCCCTGTCACTCTGGAGGCCACCGTGAACCTAGCAGAAATTGAGGAGATGGGCCCCAGCCAGAGCCGGGTCTTCTCGGCCAACTCCCTGGAGCGGGTATCCTGCCGCCCCCCTCGCGGCCACCCGGAACCCGATGTGTGGTGGGAGTGGGGCGGGGAACGCGTTCCCTCAGAGGGCAGGGTCTACCAGGACGGACTGGAGCTGGTCTTCAGCCCCACCCAGGGGGAAGACTCAGGATTGTATACCTGCGTGGGCCAGAACAAGGCTGGTACCAGGAGGCAGGAGCTGACTGTCACCGTGGCCACCCCTCCGGAGTGGGTGACAAAGCCAGAGGACAGCCAGCTTGAGGAGGGCCTCCCTGGGTACCTGCATTGCCACACCCGTGCCACGCCCCAGCCCGAGGTTACCTGGTACCGCAACTTCATCCCCATCACCACCGAGGACATTCGCTTTAAGCTGTACCCCAATGGGACCCTGAGGATCAACAGTGTAGAGGTGTATGATAACCACTTGTACATGTGTCGGAGCCAGACGGAGGCCGGGAGGGTGGAGGGCCGGGCCCGGGTCTTCGTACTTGAGAAGCTGAAGTTCACCCCCACCCCCCAGCCCTCCCAGTGTCTGGAGTTGGACAAGGAGAGCACTGTGCAGTGCTCTGCCAAGGGCCGCGAGACCCCCACCATTCAGTGGACCAAAGCAGATGGCAGTGAGCTGCCGGAGCATGTAGTCCAGACCGGCGGCGTGCTCCACTTCGCAAAGGTGACGAGGGACGACGCGGGCAACTACACCTGCCTGGCATCCAACAGCCCGCAGGGCCAGATCACAGCCGCCGTGCAGCTCACCGTAGCAGtgtaTATAACATTTAATATGGAACCGGAGCACACCACTGTTTACCAGGGCCACACAGCCATTCTGCACTGCCAGGCCACCGGCGACCCCCAGCCCTTTATCCAGTGGAAGAAGAAAGACAAGTTCCTGGAGCCTCGCAAGAGCAGGTTTCAGAAGATGCCCAACGGCTCTCTGGTCATCCACGACGTGAGTGTGGAGGACACGGGAAGCTTCACATGCATCGCTGGCAACAGCTGCAATATCGGCCACACATCGGCAGAGCTCTATGTCGTAGAGAAGCCCGTGCACCACTCGTTGGAGGAGGACGAAAAGGCGCCCTACAAGATGATCCAGACAATCGGCCTATCGGTGGGCGCCGCCGTGGCCTACATCATCATCGTCCTGGGCCTGATGTTCTACTGCAAGAAGAGACGCAACGCCAAGAGACTAAAGGGcccagagggagaggaggccGAGACAGAGCACCTCAACGGGGGCACGGTGCAGACCAACGGGCAGGCCACCGCTGAGATCCAGGAGGAGGTGGCACTGACCAACATGGGCACCACGGCCAGCAGCGCCAATAACAAGCGCCACAGCAGCCACGACAAAGGGCCCTACCCCCGCGCCAACTTGACCACCATCACCACTCTGGGGAAAGGTGAGTTTGGCGAGGTGTTCCTGGCCAAAGCCAAGGGCATCATGTCGGCAGGAGGAAGAGGCagtgaagatgaggaggagacagTGGTGCTGGTGAAGAGTCTGCAGACGCGGGACGAGACCCTGCAGCTGGAGTTCCGCCGCGAGATCGAGATGTTCGGCAAGCTGGGCCACCCCAACCTGGTGCGCCTACTGGGCATGTGCAGAGAAGCCGAGCCCCACTACCTCATACTGGAGTACGCTGAATTGGGGGACCTGAAGCAATACCTCAAGATGTCCAAGAACAAGGAGGAGAAACCCAAGTCCCATCACCTCAGCACCAAGCAGAAGgtgGGGGTGTGTCTGCAGGTTGCCCGGGGGATGGAGCATCTATCCAATCAGCGCTTCGTCCACAAGGACCTAGCCACCCGCAACTGTCTGATCAGTGCCAAGAGACAGGTCAAGGTGTCTGCACTGGGGCTCAGCAAGGATGTCTACAACGAtGAGTACTATCACTACCGGCAGGCGTGGATCCCTCTGCGCTGGCTGCCCAGCGAGGCCGTGTTTGAGGACGACTACTCCACCAAGACGGATGTGTGGTCCTTCGGCGTGCTCATGTGGGAGGTGTTTAGCCTGGGGGAGCTGCCGCACGCTGCGCTCGACCACGACAAGGTCCTCGAAGAGCTGAGGGAGGGCCGGGGGAAGCTGCCCCTGCCCCAGGGCTGTCCTTCTCGGGTGTACAAGCTGATGACTCGCTGCTGGGCCTCCAGCCCCAAGGACCGTGCCTGCTTTAATGACATCGTCTCTGCCCTCAGCGAACTGCCCTCCGAGAGCAAGGTGTAACACACACGGCCCAGGTGCACAGTTTGTGTGTAAGGGTATGAATGTGTTATCAATGGGGGgaggtgacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagcggtCGTGTACAAATGTGTACGTGAGGTACGTATacacgttgttgttgttgttgtgcatgCATGTATTGGCCTTTTGAGTTTGTGTGTCTAGCACTCCAGGACTATCCTACTCTGCCTGGTTGGCCTCTAGTTAGCGTCTACAAGAGCAGAACGAGACTCTTAACAACTAGGAAATTTGGTCGCAAATGAGGACCCAGCCGAGAAGAGATCAACATCCAATGAGCTTCTCCTTCTCTATGGATTAAAATGACTATTTTTTACAATGAGGACTTCTATTCTGCCTTAGCAGGTCAAATGCTGTCTATAACATTTTAATCTAGAAACTAATGACAGTTAACACGGTTTTCACCCCAATTGAATCTTTTCTGTTACTCATGTTTgcaaatggacaagacaaaagggACATTTTCTTCCCAGAGCCAAACGGGACATGAAGGTACAACCTCTTCGGGAGTAAAAATCGAATGTCTCTCACCCCGTTAGATATGATCAAAACGAGGTAAAGGGCCAGCGGTGGCATTATTGAACTTGTGGAGTTTAGCTGGAGTGTGGATGGAATCACCGCTCACAACCCTAGTTTTCCTTGCCTTGAAGGTAAATCTTTGGTTGGTTTTAAAGTATAGTCGTGGTAGTATATGGACCCTGAATTAGCTTCAACATGCTGTTTTGGAGTTAAGGTAACTGATCTAAGTTGTAGCATTATAGGCTAGCTATTTTATAAAGGCCATCCTGTCATGAACAGTTTTGTACTCCTATCAAAGATGTCTGAATGTTACTGCTCCATTTGCCCATCAATCATCCAATCCTATCACGACCAGAGCTTTTCCAATCAGAGTGGGAGAAACCTTTCTTCGTAGACATTCGTCTAAAAGTGCTTTGTATACATGCTTAAAACATGCACTGATCACAactatacatttttgttttctaGAAGGATTGTTTCGGAGACCTGTTAACTTATTTTAAAGGtcctgttttgtattttttcactgtaTAGAAAGGTACTAAGCTTCTTTGATATAATTTTTTTATGTGCGAGGCATTTTATGATGTGTAATAGTTTGTCCATTTTCCTTTTGCCCCCCCAAAATTGAATTAAGGTTCACCTGAATTGAAAAAAAATGCCTGGCAAATGAAGGACTCTGCATCAGATTGCTGTCTTGCTATTGTTTTTATATTTACTTTCTTGCTTTTGTTTTAATATTTACTTTTTTACGTGAACATTTTTATACATTGCAGTTTTCTATTTTAAGTATGTTTATACAAACGCATATTAGCCATGGCATATACATGGCGCTGGTCCAATAAAATGTTGTAAATGTACCTTT

Function

NR:

description
inactive tyrosine-protein kinase 7-like

GO: NA

KEGG:

id description
K05127 PTK7, CCK4; PTK7 protein tyrosine kinase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568239.2 True 5071 mRNA 0.52 20 33996168 34034123

Neighbor

gene id symbol gene type direction distance location
LOC110493768 hebp1 coding upstream 452 33983660 ~ 33995716 (+)
LOC110493767 LOC106564808 coding upstream 26068 33937534 ~ 33970100 (+)
LOC110493766 LOC106564809 coding upstream 69714 33842338 ~ 33926454 (+)
LOC110493170 LOC108247247 coding upstream 171084 33823650 ~ 33825084 (+)
LOC118940097 NA coding upstream 227509 33767235 ~ 33768659 (+)
LOC110493770 LOC106585018 coding downstream 6138 34040261 ~ 34121223 (+)
LOC110493772 LOC106564803 coding downstream 95803 34129926 ~ 34132623 (+)
LOC110493775 LOC106564801 coding downstream 138953 34173076 ~ 34233684 (+)
LOC110493777 NA coding downstream 207790 34241913 ~ 34254653 (+)
LOC110493778 LOC106564798 coding downstream 255894 34290017 ~ 34317682 (+)
G1441188 NA non-coding upstream 64944 33882512 ~ 33931224 (+)
G1441286 NA non-coding upstream 104676 33890743 ~ 33891492 (+)
G1441281 NA non-coding upstream 113021 33882865 ~ 33883147 (+)
G1441225 NA non-coding upstream 195772 33798975 ~ 33800396 (+)
G1441224 NA non-coding upstream 197500 33798433 ~ 33798668 (+)
G1441536 NA non-coding downstream 3817 34037940 ~ 34038151 (+)
G1441541 NA non-coding downstream 89045 34123168 ~ 34123495 (+)
G1441593 NA non-coding downstream 89800 34123923 ~ 34124147 (+)
G1441576 NA non-coding downstream 92197 34126320 ~ 34126633 (+)
G1441580 NA non-coding downstream 93598 34127721 ~ 34128226 (+)
G1441315 NA other upstream 19693 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 471634 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1040111 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1198736 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1229461 32712860 ~ 32766707 (+)
LOC110493802 LOC106564779 other downstream 1134775 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1639841 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1712749 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 2204821 36234292 ~ 36242642 (+)

Expression


Co-expression Network