XLOC_033263


Basic Information

Item Value
gene id XLOC_033263
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 58670705 ~ 58672580 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065262
ttaataacactttaaaaattCTAGGTTATATATGGGTTGTTCAGActgttgtgtttgtccatatttgacccgaTATGGTTTTGAATAATGtagcatttttagagtgttgtTGTAACCCAAACTTGCGTAAATTATGGGCAAACCAGACTTTCGGGTTACAAAGCATAGTTTAAAGAATGAAGCCGATAGTTGTGTTAGGCCATATTTGAACCAACATTGAGGAAAACAACCAAACATTTTTAGAGAGCAGAGCCAGCATATGTACATGTACAGTCTTTATAAAGCTGGCTCGGGTCAAATATGGGCAAacccatttaaataataaaaatgacccaACTTTGGGTTTTAACAACACGGCAAGTGTTTCATGAAATGGGTGAAATATGGACAAACGCAAAGTTGATTTATAGTTATGCctatgaattgaactgaataaatGATGCCAGCAGTTAGTTCTGTGCATATTTGACTAAATTTGTTTGAAATGACCCATAATTCTTTTAGAAATCAcactaaaaattattatttgttttaaaccagTGCTGGTTTAATTTgtccaattaaatttaaatgacacattttaaccAAATGGTTGGGTTTATCCATATGTGACCCAATATTGTGTTAAAACAACACTCTAAAATGTTAGGTGTCAAAAATGCTGAGTTTTTATAATGATtgtttgggtcaaatatgggcaAACCCAACTGTTGTGTTTGCTCATATTTGACCTGATATAGTTTTGAATAATGTCGCATTTTTAGTGTTGTTGTAACCCAAACTTGAGTCAAATATGGGCAAACCAGACTTTTGGGTTACAAAGCGTAATTAAAAAGAATGAACCCAATAGTTGAGTTTGGCCatttttgacccaacattgagtaAAACAGCCCAACATTTTTTAGAGAGCAGTTTTGAGAAAAACTTTGTATTCACTCTAAAAAAAGAGTCTGGGCTATCATGACCCAGCATATGTACATGTACAGTCTTTAAAAAGCTGGCTCGGGTCAAATATGGGCAAacccatttaaataataaaaatgacccaACTTTGGGTTTTAACAACACAGCAAGTGTTTCATGaaatgggtaaaatatggacaaacgcaAAGTTGATTTATAGTTATGCCTCTAAAGTGAACTGAATAAATGATGCCAGCAGTTAGTTCTGTGCATATTTGACTAAATTTGGTTGAAATGACCCATAATTCTTTTAGAAATCACACTAAAAATGATCATTTGTTTTAAACCAGTGCTGGTTTAATTTTTCCAATTAAATTTAAAGGACacattttaacccaatggttgggtttgtccatatttgacccaatattgggttaCAACAACACTCTAAAATGTTAGGtgttaaaaatgctgtttttt

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065262 True 1383 lncRNA 0.33 2 58670705 58672580

Neighbor

gene id symbol gene type direction distance location
XLOC_033261 tox2 coding downstream 521540 57900237 ~ 58149165 (-)
XLOC_033262 NA coding downstream 588070 58081635 ~ 58082635 (-)
XLOC_033260 NA coding downstream 880680 57787720 ~ 57790025 (-)
XLOC_033259 CABZ01087330.2 coding downstream 901047 57769542 ~ 57769658 (-)
XLOC_033258 cbfa2t2 coding downstream 947843 57634360 ~ 57722862 (-)
XLOC_033264 NA coding upstream 58718 58731298 ~ 58733557 (-)
XLOC_033265 soat2 coding upstream 64588 58737168 ~ 58764672 (-)
XLOC_033266 kif5ab coding upstream 99629 58772209 ~ 58828398 (-)
XLOC_033267 mbd6 coding upstream 199020 58871600 ~ 58910402 (-)
XLOC_033268 mars1 coding upstream 248660 58921240 ~ 58975019 (-)
XLOC_033257 CU693502.1 non-coding downstream 1039541 57630414 ~ 57631164 (-)
XLOC_033256 NA non-coding downstream 1048836 57620905 ~ 57621869 (-)
XLOC_033269 NA non-coding upstream 375327 59047907 ~ 59050828 (-)
XLOC_033270 NA non-coding upstream 378406 59050986 ~ 59053205 (-)
XLOC_033271 NA non-coding upstream 394375 59066955 ~ 59068903 (-)
XLOC_033272 CABZ01111575.1 non-coding upstream 464091 59136671 ~ 59136787 (-)

Expression


Co-expression Network