Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493810 |
| gene name | pet117 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 35261905 ~ 35263907 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| pet117 | Predicted to be involved in mitochondrial cytochrome c oxidase assembly. Located in mitochondrion. Implicated in cytochrome-c oxidase deficiency disease. |
| description |
|---|
| PREDICTED: protein PET117 homolog, mitochondrial |
| id | description |
|---|---|
| K18188 | PET117; protein PET117 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568308.2 | True | 1078 | mRNA | 0.47 | 3 | 35261905 | 35263907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| polr3f | polr3f | coding | downstream | 23032 | 35233324 ~ 35238873 (-) |
| LOC110493805 | LOC106564776 | coding | downstream | 33985 | 35219754 ~ 35227920 (-) |
| zgc:194981 | LOC106564776 | coding | downstream | 56260 | 35203548 ~ 35205645 (-) |
| LOC110493803 | LOC106564778 | coding | downstream | 62699 | 35183366 ~ 35199206 (-) |
| LOC110493800 | LOC106564782 | coding | downstream | 201039 | 35023723 ~ 35061975 (-) |
| mtif2 | mtif2 | coding | upstream | 54306 | 35318213 ~ 35344243 (-) |
| LOC110493813 | NA | coding | upstream | 189653 | 35453560 ~ 35511806 (-) |
| LOC110493814 | LOC106584953 | coding | upstream | 253845 | 35517752 ~ 35605275 (-) |
| LOC110495171 | cssa12h2orf73 | coding | upstream | 351322 | 35615229 ~ 35617995 (-) |
| LOC110493815 | acyp2 | coding | upstream | 380844 | 35644751 ~ 35651610 (-) |
| G1442802 | NA | non-coding | downstream | 42237 | 35219436 ~ 35219668 (-) |
| G1442800 | NA | non-coding | downstream | 44864 | 35215450 ~ 35217041 (-) |
| G1442799 | NA | non-coding | downstream | 46888 | 35214788 ~ 35215017 (-) |
| G1442743 | LOC106564776 | non-coding | downstream | 56348 | 35183262 ~ 35205557 (-) |
| G1442786 | NA | non-coding | downstream | 84669 | 35176457 ~ 35177236 (-) |
| G1442956 | NA | non-coding | upstream | 18518 | 35282425 ~ 35282669 (-) |
| G1442960 | rrbp1 | non-coding | upstream | 38890 | 35302797 ~ 35305108 (-) |
| G1442989 | NA | non-coding | upstream | 79520 | 35343427 ~ 35399253 (-) |
| G1443048 | NA | non-coding | upstream | 164120 | 35428027 ~ 35428367 (-) |
| G1443055 | NA | non-coding | upstream | 168509 | 35432416 ~ 35432782 (-) |
| G1442932 | rbbp9 | other | downstream | 29751 | 35228754 ~ 35232154 (-) |
| G1442443 | NA | other | downstream | 357289 | 34904082 ~ 34904616 (-) |
| G1442336 | LOC106564790 | other | downstream | 541113 | 34720427 ~ 34720792 (-) |
| G1442139 | NA | other | downstream | 900599 | 34360102 ~ 34361306 (-) |
| LOC110493173 | slc29a1 | other | upstream | 716074 | 35979898 ~ 36012831 (-) |
| LOC118940405 | slc29a1 | other | upstream | 825377 | 36087429 ~ 36123409 (-) |
| G1443821 | NA | other | upstream | 906963 | 36170870 ~ 36174051 (-) |
| LOC118940419 | LOC103395674 | other | upstream | 1023274 | 36287181 ~ 36287741 (-) |
