LOC118940422



Basic Information


Item Value
gene id LOC118940422
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37111252 ~ 37112362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005036975.1
TGCTGGGCAGTCTGAGCCCCAGGGGGGAAGAACGGGAGCAGGCGTGACTGTCCCGTCCCCTCTAGGGGTGCCACCCAGcgtcccacctgggcgagcctgaTGTGCCGGCCGAGGCACGGGCGCTGGACAAGCCGCAGGGCGTGAAAACCCGACGTACCGGCAGAGGCGTGAGAGCctggcgagccggctgaggcCTGACGTGGGATGGGCGCCTTCCCGAGCCAACCTGGGCAAGAAACCTCTCAAGCCAGCTAGGGCGTGACAGCTCGACGAGCTGGTttaggcacccccggttccatcggTGGCGCCACCCAGACCCGACATTACCACCAACCGGAAAGGCAGcacaagacaggaacagcgtcagcacatgGGTATACAAGGAAACATGACAATCAATGCTGAAGCGGgggaacagacagataaaggggaggtaatgacagaggtgattgagtccaggaaaaccgttacagcaggtgtgcgtaatgatggtggcaggagtacgTAATGCTGCGCCCTCGAGCACCAGGGGGAAGAGCAGGAGCAAGCGTGACAGAAAACAACTGTTTGCAAACTATTGGATTAGGTTAAACCCTATTTTATTTTTAGTCTGATTAAACTCATATTACTGTTACATAATGTCAGATCCTTGTGAAGATGTCAAACTGCTCATGTATTTCTTGGAATTATGATGGTAAAGACATCTTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005036975.1 True 708 mRNA 0.55 2 37111252 37112362

Neighbor


gene id symbol gene type direction distance location
LOC110493852 spag1 coding upstream 78115 37029581 ~ 37033137 (+)
rbpjl LOC106565033 coding upstream 132610 36951171 ~ 36978642 (+)
LOC110493846 NA coding upstream 308953 36795839 ~ 36802299 (+)
LOC110493845 LOC106565027 coding upstream 341470 36723934 ~ 36769782 (+)
if6 if6 coding upstream 434506 36670778 ~ 36676746 (+)
LOC118940423 NA coding downstream 182960 37295322 ~ 37301815 (+)
LOC118940100 NA coding downstream 190520 37302882 ~ 37307944 (+)
LOC110493859 LOC106565040 coding downstream 197350 37309712 ~ 37319725 (+)
LOC110493860 NA coding downstream 266047 37378409 ~ 37392533 (+)
chd6 NA coding downstream 294564 37406926 ~ 37514061 (+)
G1444303 ywhaba non-coding upstream 57999 37042929 ~ 37053253 (+)
G1444233 LOC106565035 non-coding upstream 108774 37000029 ~ 37002478 (+)
G1444245 NA non-coding upstream 178903 36932061 ~ 36932349 (+)
G1444240 NA non-coding upstream 185246 36925727 ~ 36926006 (+)
G1444239 NA non-coding upstream 185603 36925267 ~ 36925649 (+)
G1444356 NA non-coding downstream 3087 37115449 ~ 37115648 (+)
G1444357 NA non-coding downstream 3313 37115675 ~ 37115875 (+)
G1444367 LOC106565038 non-coding downstream 15302 37127664 ~ 37128490 (+)
G1444331 NA non-coding downstream 56474 37168836 ~ 37188489 (+)
G1444382 NA non-coding downstream 77520 37189882 ~ 37210863 (+)
G1444198 LOC106565031 other upstream 250243 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 553481 36492282 ~ 36557771 (+)
G1443844 NA other upstream 735878 36331235 ~ 36375374 (+)
LOC118940407 NA other upstream 870527 36234292 ~ 36242642 (+)
G1443251 NA other upstream 1359462 35746872 ~ 35751790 (+)
G1444933 NA other downstream 289835 37402197 ~ 37402492 (+)
rbl1 rbl1 other downstream 473518 37538220 ~ 37588797 (+)
G1446149 NA other downstream 1196767 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 2230665 39342991 ~ 39426900 (+)

Expression



Co-expression Network