Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493876 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 39220263 ~ 39225724 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036979.1 | True | 887 | mRNA | 0.48 | 2 | 39220263 | 39225724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| asip1 | asip | coding | upstream | 36303 | 39178717 ~ 39183960 (+) |
| raly | LOC106565059 | coding | upstream | 138802 | 38909389 ~ 39081461 (+) |
| romo1 | romo1 | coding | upstream | 542782 | 38675958 ~ 38677481 (+) |
| mtss1 | LOC106565049 | coding | upstream | 673480 | 38428173 ~ 38546783 (+) |
| osgn1 | LOC106565048 | coding | upstream | 814310 | 38390133 ~ 38405953 (+) |
| pmepa1 | pmepa1 | coding | downstream | 117267 | 39342991 ~ 39426900 (+) |
| ccndbp1 | ccndbp1 | coding | downstream | 274972 | 39500696 ~ 39521498 (+) |
| LOC110493884 | LOC106565072 | coding | downstream | 426140 | 39651864 ~ 39696026 (+) |
| LOC110493887 | LOC106565076 | coding | downstream | 680549 | 39906273 ~ 39917797 (+) |
| LOC110493888 | LOC106565077 | coding | downstream | 722902 | 39948626 ~ 40269835 (+) |
| G1447017 | NA | non-coding | upstream | 97295 | 39122767 ~ 39122968 (+) |
| G1446992 | NA | non-coding | upstream | 129115 | 39089905 ~ 39091148 (+) |
| G1446994 | NA | non-coding | upstream | 130785 | 39089269 ~ 39089478 (+) |
| G1446991 | NA | non-coding | upstream | 133537 | 39086508 ~ 39086726 (+) |
| G1446874 | NA | non-coding | upstream | 136819 | 39081804 ~ 39083444 (+) |
| G1447480 | NA | non-coding | downstream | 204252 | 39429976 ~ 39434546 (+) |
| G1447563 | NA | non-coding | downstream | 381245 | 39606969 ~ 39607548 (+) |
| G1447558 | NA | non-coding | downstream | 471494 | 39697218 ~ 39717880 (+) |
| G1447648 | NA | non-coding | downstream | 495073 | 39720797 ~ 39767245 (+) |
| G1448007 | NA | non-coding | downstream | 580220 | 39805944 ~ 39806156 (+) |
| G1446149 | NA | other | upstream | 909399 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 1631536 | 37538220 ~ 37588797 (+) |
| chd6 | NA | other | upstream | 1779851 | 37406926 ~ 37514061 (+) |
| G1444933 | NA | other | upstream | 1817771 | 37402197 ~ 37402492 (+) |
| G1444198 | LOC106565031 | other | upstream | 2359254 | 36857566 ~ 36861009 (+) |
| G1447998 | NA | other | downstream | 574212 | 39799936 ~ 39800236 (+) |
| LOC110493893 | cdh22 | other | downstream | 1723818 | 40767465 ~ 41084819 (+) |
| LOC110493897 | LOC106565282 | other | downstream | 2416399 | 41641874 ~ 41706180 (+) |
| G1450387 | NA | other | downstream | 2567159 | 41792883 ~ 41890515 (+) |
