ccndbp1 (ccndbp1)


Basic Information

Item Value
gene id ccndbp1
gene name ccndbp1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39500696 ~ 39521498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949864.1
CGACTGCCATTACAAAAATGTTCTAAATAATAGTTCCAGAATAGCATGAAGTTGTGCGTGTGTACATGGTGCCATGAGTGCTGATAATTCTTGTGCGGACGTGTCGGTACCTTTACGGAATCTCCTAAACTCGGTCCAGGGTGTTCGAGACCGAGTAAAGGATGGGGAGTCCAACGAGTCCAATGGGGTGTTCAACCTGTCAAACTTCTGGGATACGCTGATGCAAGCAGTGAAAGCAGCCTCACAGGAAGCCACTAAACTCAGCCTTGCCTTCTCTAAGCCTCCCTTGCCAACACAAGAGGATGGTGAGAAGTTTGCTGAATCCATCCAGAAGAGCGTTTTGGCACtatccactgtgtattactggtTGCCCAAAAGCCATGGTATCACATTGAGGAGACTGGTGAGAGATGCCACAGCTGAGGTGCTAGATGGCATTGTGCAACTGGTGGATGTCATCGTCAGTTCCCCACTACAGAGTTTATCACAGGAACAGCTCCAATCTACAGGTGGGGTGTGGTCAGCGTGTGACCAGTTTGCACACTTACCAAGAGATAACCGGGCAGCAGTGCTGGGGGTCTTGGCCTCCTATATCGGGGTGGTAAAGGATGCCATAGAGGAGATGGAACAGGCACAGGCTGAGAGCCAGGACCcattcagtgatgtgttggatgaCGAGGACCAGGACTCGCGGGGCAACCAGGACACATACTGGTCCGAGGAGGACCGCCAGCTCATGGCGCCTTGCCAGGGCCTGATGAAAGCATCTGCTGCCTGCCTGAGGAAGCTGTTGTCTGCCGTCAAGGCCAATGGCAACGTAAGCATACCAGAGACTGTGGCGCAGCTGGACGACCTGGCCGATATCAGCAAGGAGATCAGCCCCAGAAATGCCGGTTGGAATATTGCCAGAATCAGGAGCAAGTAATCTGGAGTCCAATGAGCAGGATTTCTGGGAATTTGGAGTGaatttctggaattttgcaaccatAGACACACCAACATTCAAGGAAACCGGGTTTTGGCATTACTCTGCAGAAGTTTAATAAATTGTTGGTTCCTAGTACCTCCAAAGACCCTTGCCATCAAGTACATGAAGCAGCAAAAGTCATTTTTAAATAAAGAGTGCACATTGGTAGCCAATTGGTGCACAATTAGGAAGCAGGTTGATACAACTACACTGAATACCAGATATGCTCATGTAATGACTGAGAATAGTTTGTTCTCATGCTTGTGCATCATTAGCCAAAGTGTATATAATgcccacaccagacactgaccttGGGGACAAGGTCACAGTATATGATCGATCTAGTAATCTTTGAAATACGCTTAACTCAGGAACCAACGCTTGTTTATGGGGTtgacctctgactctctctgtgtgc
>XM_021568442.2
CGACTGCCATTACAAAAATGTTCTAAATAATAGTTCCAGAATAGCATGAAGTTGTGCGTGTGTACATGGTGCCATGAGTGCTGATAATTCTTGTGCGGACGTGTCGGTACCTTTACGGAATCTCCTAAACTCGGTCCAGGGTGTTCGAGACCGAGTAAAGGATGGGGAGTCCAACGAGTCCAATGGGGTGTTCAACCTGTCAAACTTCTGGGATACGCTGATGCAAGCAGTGAAAGCAGCCTCACAGGAAGCCACTAAACTCAGCCTTGCCTTCTCTAAGCCTCCCTTGCCAACACAAGAGGATGGTGAGAAGTTTGCTGAATCCATCCAGAAGAGCGTTTTGGCACtatccactgtgtattactggtTGCCCAAAAGCCATGGTATCACATTGAGGAGACTGGTGAGAGATGCCACAGCTGAGGTGCTAGATGGCATTGTGCAACTGGTGGATGTCATCGTCAGTTCCCCACTACAGAGTTTATCACAGGAACAGCTCCAATCTACAGGTGGGGTGTGGTCAGCGTGTGACCAGTTTGCACACTTACCAAGAGATAACCGGGCAGCAGTGCTGGGGGTCTTGGCCTCCTATATCGGGGTGGTAAAGGATGCCATAGAGGAGATGGAACAGGCACAGGCTGAGAGCCAGGACCcattcagtgatgtgttggatgaCGAGGACCAGGACTCGCGGGGCAACCAGGACACATACTGGTCCGAGGAGGACCGCCAGCTCATGGCGCCTTGCCAGGGCCTGATGAAAGCATCTGCTGCCTGCCTGAGGAAGCTGTTGTCTGCCGTCAAGGCCAATGGCAACGTAAGCATACCAGAGACTGTGGCGCAGCTGGACGACCTGGCCGATATCAGCAAGGAGATCAGCCCCAGTGTTGATGACCTGGTACTCAGTCTCTACCCACCCATGGATTACTCAGGAGTGGATCAAAACGCATGTAAACTGACCTTGGTGCTAAAGAAAGTGTTGGATATCATCAGGGTGAGTCACGTGTGTTTAGAAGCAGACCTGAACTGGGTGCAGTTTCTGAACGGGGCCCTGGATCACAACCTACAGAAGATCAAAGGTCTGATTCAAGGCTCCAGCTAGATGATGAGTGGAGGGTGTGCGTGAGGTGAATGGAGACAAAGGTGTGTGTATACGTTTATGGAGAAAGGGAAGATGTGTGAAGAGGACTGGGGCCATCCTCTCTGACCCTGAGCTCAATGGACTTTGTTGAATGTTATGCAAGTGTTTACTTCCCCCTTGTGTACACACTCTATACATCATTAAGACAGCAGACATATTTGCAAAATGTAAAAATCTTGCTTCATGTGTGTATAAATATTTATAGATTAATTTTGGCTTTACCACTCATCTAGATGGATGTTTTGCAGTGGCATAAGTCTGTTTGGAGATCTTTAATCAACAGGCTTGACTTTGCAAAGAACAATAACAAGATGCCGTTTGCATAGAATTTGTACACAGtcaaactacagtattatacattGAGGGAAAGCGATTTCTGTGTACTTCTGCTGCCCACTTTTGGAAATTAGAATTTTTGCTGAATATTGTTCAACAATGAAGACCATGCTATAAAATATGATTTTATTAAATGACAATGACCGGCACTTttgtaaatacaaaataaaagtaACTCGCCTTGCACTCAAACATGA

Function

symbol description
ccndbp1 Predicted to act upstream of or within regulation of cell cycle. Located in cytoplasm. Is expressed in hepatocyte; intestine; kidney; liver; and testis. Orthologous to human CCNDBP1 (cyclin D1 binding protein 1).

NR:

description
cyclin-D1-binding protein 1 isoform X2

GO: NA

KEGG:

id description
K21626 CCNDBP1, DIP1, GCIP; cyclin-D1-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949864.1 False 1385 mRNA 0.49 9 39500696 39518437
XM_021568442.2 True 1674 mRNA 0.47 11 39500696 39521498
Loading

Neighbor

gene id symbol gene type direction distance location
pmepa1 pmepa1 coding upstream 80885 39342991 ~ 39426900 (+)
LOC110493876 NA coding upstream 274972 39220263 ~ 39225724 (+)
asip1 asip coding upstream 316736 39178717 ~ 39183960 (+)
raly LOC106565059 coding upstream 419235 38909389 ~ 39081461 (+)
romo1 romo1 coding upstream 823215 38675958 ~ 38677481 (+)
LOC110493884 LOC106565072 coding downstream 130366 39651864 ~ 39696026 (+)
LOC110493887 LOC106565076 coding downstream 384775 39906273 ~ 39917797 (+)
LOC110493888 LOC106565077 coding downstream 427128 39948626 ~ 40269835 (+)
LOC110493889 LOC106565080 coding downstream 791378 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 846259 40367757 ~ 40378949 (+)
G1447480 NA non-coding upstream 66150 39429976 ~ 39434546 (+)
G1447017 NA non-coding upstream 377728 39122767 ~ 39122968 (+)
G1446992 NA non-coding upstream 409548 39089905 ~ 39091148 (+)
G1446994 NA non-coding upstream 411218 39089269 ~ 39089478 (+)
G1446991 NA non-coding upstream 413970 39086508 ~ 39086726 (+)
G1447563 NA non-coding downstream 85471 39606969 ~ 39607548 (+)
G1447558 NA non-coding downstream 175720 39697218 ~ 39717880 (+)
G1447648 NA non-coding downstream 199299 39720797 ~ 39767245 (+)
G1448007 NA non-coding downstream 284446 39805944 ~ 39806156 (+)
G1448130 NA non-coding downstream 382762 39904260 ~ 39904461 (+)
G1446149 NA other upstream 1189832 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 1911969 37538220 ~ 37588797 (+)
chd6 NA other upstream 2060284 37406926 ~ 37514061 (+)
G1444933 NA other upstream 2098204 37402197 ~ 37402492 (+)
G1447998 NA other downstream 278438 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 1428044 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 2120625 41641874 ~ 41706180 (+)
G1450387 NA other downstream 2271385 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3807088 43328586 ~ 43459832 (+)

Expression

ccndbp1(ccndbp1) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 80.
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ccndbp1(ccndbp1) Expression in each Bioproject

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ccndbp1(ccndbp1) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network