LOC110493893 (cdh22)


Basic Information

Item Value
gene id LOC110493893
gene name cdh22
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40767465 ~ 41084819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568462.2
GTGGCAGAGAAGAGAGCGCTTCAGACTGTCCGCGCTGCTCCTGCTAGGACTGCTCCTCATAGGGGATCATATATTTTCGAAAAACACAAGTCGGATAAAAAGGAACAGTCTCTCCCAACTTGCTACCCGAGTCTGCTTTGACATTTTCACACGTAAAAAGGGCTGCggggagatggagagtgaaaTTAGGGGTGACATGAAGAGGACCGGAAGACCTGAAGAGTATAATTTTCTGTAAAGAAACCAGCAAGGTTTTGCCATTTCCTTCAGCACTTTATGGGGACCCTCTCTATGCCTGAATCATCGAGAAGAATTCTGGAATGGAATAATATCTAAGCCAATGGAGTCCCATGAAGGATACTGTTCCCTAATACTGCAATGTAGTGAAAAGAGACGGTCGCTGGACGCTTGTAATCTGTGGATCTGAGGACTCAAGTGTTCGAATGACCTGCATTTCTttgaaatccattttaatttgAAAGTACAAAATAAAGATATTTTGAAAGATAATAGCTACGTATTTTAGTGTCAATCAGCTCCAATAGTTTGGAGTTAGTGATGAGATACCCAAGGTTTTTAGTAAGATTTTAACCTTGTTTTACCAGTTGCATCCCAAATTGACCTTGATAATGATACCAAGGCCATTTCAATGGTTATAGGTCCCACGATCTTCTACTCAAAGGAGCTTGTCCATTGCAGGATTTCCCAAGTGATGTGTTTGaatttttacaaaaaaataccaTGTATGGATTGAAATTGTCAATTTGAATTCTCAGGGAGTTTTGTATCAATATCAGGCCCACTCCCTTCAACGCCATACTTGTTTTAGAGATTGTGGTGCTGCCGTCAACGACGTGAAACTGTGCTACCCATAAAGCATATGGGAAAGCTAGTCTTGGAAATCTCGAATGGAGTTTTCCCTTGTACAGTAACAAAAGACATCTCTGTTACCAGAATGGATTTGATACCAGTGTAGACAGACAGTGGAGATAAGTCTGGAAAAACTCAATGGCGAAGATCACACGGGAAAGATAAGTCTGTTTCAAAATGATTTGTCAAGTTTCTTCTGCAAAGAGAAAAAACATTCTGCAGTCTTTCTAAATTCCCCGAATCATGGCGTGCCATGACATGCCCTGCATCCTGAGACGGAACTATTTAAGACAATTGAATACTCAAGAATCTTGTGAATTAATCCAAGAGCCCTAGAACAGAAATCTTGGTTGTCCTTGGTGTGTTTGTTCTTCAACATTGCTGGCTTGAGGACTCTTTTCACCTCTTCTGTAATCTCCGTCGTATGTAGAGCCAATCAGGATTTTCCAAAATGGCTACCTGTTGGAGACTGGGAGCTTGTAGCCTGTTGGTGGCCCTTTGGCTTTTGCATTGCTGTAGTTGTGGATGGTCAGAGACCACAAGGACTAATGGCGTGGCCAAGGGTGAAACGAAGGAGCAGGAGCTCATGTCCCATGAACGAGTGAAGAGAGGATGGGTGTGGAACCAGTTCTTTGTGGTGGAGGAGTACACAGGCACAGAACCACTCTACGTTGGAAAGATCCACACAGATTCGGACGAGGGCGAGGGGAACATCAAGTACACCATCTCCGGGGAAGGGGCGGGCACGATCTTCATCATCGACGAGCTGACGGGCGACATCCACGCCACCGAGCGATTAGACCGCGAGGAGCAGAGCTACTACACCCTCAGAGCTCAGGCCCGGGACCGGCTCACCAACCACCTGCTGGAATCCGAGTCAGAGTTTGTCATCAAAGTCCAGGATATCAACGACAGTGAACCCAAGTTCCTGGAAGGGCCCTATATCGGGAGTGTGGGAGAGCTTTCACAAATagGAACATCGGTGATGAAGGTCACTGCGTCGGATGCAGATGATCCTACATACGGGAGCAGTGCCAGGGTTGTGTACAGCGTGCTGGACGGAGAGAGGTTCTTCacagtggacagacagacagGACTGATTCGGACGGCCGTGGCAGATCTGGACCGGGAGAAGCAGGATCGCTATGAGCTGGTCGTCAAGGCAACTGACATGGCAGGCCAAATGGGCGGTCTCTCCGGCTCCACCACAGTGACCATAGTTATCACAGATGTTAATGACAACCCACCACGCTTTCCGCAGAAGATGTACCAGTTTTCAATGTCTGAGGGGGCAGCCGTGGGGACGCCGGTGGGGAGGGTGATCGCCACGGACGCAGACATGGGGGAGAACACAGACATGAGCTACCTGATCAAAGATGAGGAGGGCGGGGAACTCTTCAAAGTCACCACCGACAGTGACACGCAAGAGGCCATCATCACCATCAAAAAGGCATTGGACTTTGAGAGCAAGCGCACACACAACGTGGTGGTGGAGGCTGTCAACAAGCACGTAGACCCCCGCTTTTCGGAGCTGGGTTCTTTTCGGGACCAGACCATCGTGCGGGTCAGTGTAAACGACATTGATGAGCCGCCTGTCTTCCACCCTGCTGAGGGAACCATCTTGGAGGTCCAGGAGGATGCTAGGCTAGGGGCGGTGGTGGGCACTGTGACTGCCAAGGACCCGGACATGGAGAACGCACCTGTCAGGTACTCTATTGACCAGAGTACGGACCAGGAGCAGATCTTCCACATTGATCCAGTTTCGGGTGCCATCACGCTGGGCAATATTCTGGACCGAGAGACGGCTGGCTGGCACAACATTACTGTGATGGCAGTGGAAGCAGATAATGTATCCCAGATATCCCATTCGTCAGTGAGTATTCGTATCCTGGATGTGAATGACAACCCTCCTGAACTGGCCACGCCCTATGAGGCATCTATCTGTGAGGATGCCAAGCCGGGTCAGctCATTCACTCTATCAGCGTGGTGGATAGGGACGAGCCGCAGTTGGGCCACCGCTACTACTTCACCCTGGCACCGGAGGCCACCAACAACCGCCACTTCACCCTGTGGGATGTCAAAGACAATACTGCGGGAATCCGGACACAGCGCTCAGGCTTCAACCGCCACGAGCAGAACGTCTACCTTCTGCCTATCCTGGTAGTGGATAGCGGGCCTCCCGCCCTGAGCTCCACGGGCACCTTGACCATCCACGTGTGTGGCTGTGACCCGGAGGGCACCATCCAGTCCTGCAATGCCACCGCCTACGCCATTAGCACCTCACTCAGTCCCGGGGCCCTCATAGCCCTACTGGTCTGCATGCTCATACTCATTGTCCTGGTGCTGCTAATCCTAACCCTGAAGCGTCACCGCAAGGGCCAGAGCATGTCGGAGGATGAGGAGGACATGCGCGACAATGTCATCAAGTACAACGATGAGGGTGGCGGCGAGCAGGACACGCAGGCCTACGACATGAGTACCCTGCGCAACCTCTTTGACTTTCCAGAGGCTAAGGGTGGCTCGTCCGAGTCAGGCCCTGAACTACGCACGCTGCCCCAGTGGATTCAGGGGCAGATGAGTGGTGACGGCGAGGCGGCCGACTTTTCCCTCTTCAAGGGCTACATCCGCAAGAAGGTGGAGCAGACAGATGGCGACCTGTCGGTGCCGCCCTACGACTCATTCCAGACGTACGCCTTCGAGGGAAACAGCTCGCCagccctctctctcagctccatcCACACCCTGTCCACCACATCTGATCAGGATTTCTCCTACCTCAGCGACTGGGGGCCGCGCTTCAGGCAACTGGCGGGATACTATGCCCCGGGACATCCTGAGGAAGACGGCTCCTAG
>XM_036949887.1
GGCAGAGAAGAGAGCGCTTCAGACTGTCCGCGCTGCTCCTGCTAGGACTGCTCCTCATAGGGGATCATATATTTTCGAAAAACACAAGTCGGATAAAAAGGAACAGTCTCTCCCAACTTGCTACCCGAGTCTGCTTTGACATTTTCACACGTAAAAAGGGCTGCggggagatggagagtgaaaTTAGGGGTGACATGAAGAGGACCGGAAGACCTGAAGAGTATAATTTTCTGTAAAGAAACCAGCAAGGTTTTGCCATTTCCTTCAGCACTTTATGGGGACCCTCTCTATGCCTGAATCATCGAGAAGAATTCTGGAATGGAATAATATCTAAGCCAATGGAGTCCCATGAAGGATACTGTTCCCTAATACTGCAATGTAGTGAAAAGAGACGGTCGCTGGACGCTTGTAATCTGTGGATCTGAGGACTCAAGTGTTCGAATGACCTGCATTTCTttgaaatccattttaatttgAAAGTACAAAATAAAGATATTTTGAAAGATAATAGCTACGTATTTTAGTGTCAATCAGCTCCAATAGTTTGGAGTTAGTGATGAGATACCCAAGGTTTTTAGTAAGATTTTAACCTTGTTTTACCAGTTGCATCCCAAATTGACCTTGATAATGATACCAAGGCCATTTCAATGGTTATAGGTCCCACGATCTTCTACTCAAAGGAGCTTGTCCATTGCAGGATTTCCCAAGTGATGTGTTTGaatttttacaaaaaaataccaTGTATGGATTGAAATTGTCAATTTGAATTCTCAGGGAGTTTTGTATCAATATCAGGCCCACTCCCTTCAACGCCATACTTGTTTTAGAGATTGTGGTGCTGCCGTCAACGACGTGAAACTGTGCTACCCATAAAGCATATGGGAAAGCTAGTCTTGGAAATCTCGAATGGAGTTTTCCCTTGTACAGTAACAAAAGACATCTCTGTTACCAGAATGGATTTGATACCAGTGTAGACAGACAGTGGAGATAAGTCTGGAAAAACTCAATGGCGAAGATCACACGGGAAAGATAAGTCTGTTTCAAAATGATTTGTCAAGTTTCTTCTGCAAAGAGAAAAAACATTCTGCAGTCTTTCTAAATTCCCCGAATCATGGCGTGCCATGACATGCCCTGCATCCTGAGACGGAACTATTTAAGACAATTGAATACTCAAGAATCTTGTGAATTAATCCAAGAGCCCTAGAACAGAAATCTTGGTTGTCCTTGGTGTGTTTGTTCTTCAACATTGCTGGCTTGAGGACTCTTTTCACCTCTTCTGTAATCTCCGTCGTATGTAGAGCCAATCAGGATTTTCCAAAATGGCTACCTGTTGGAGACTGGGAGCTTGTAGCCTGTTGGTGGCCCTTTGGCTTTTGCATTGCTGTAGTTGTGGATGGTCAGAGACCACAAGGACTAATGGCGTGGCCAAGGGTGAAACGAAGGAGCAGGAGCTCATGTCCCATGAACGAGTGAAGAGAGGATGGGTGTGGAACCAGTTCTTTGTGGTGGAGGAGTACACAGGCACAGAACCACTCTACGTTGGAAAGATCCACACAGATTCGGACGAGGGCGAGGGGAACATCAAGTACACCATCTCCGGGGAAGGGGCGGGCACGATCTTCATCATCGACGAGCTGACGGGCGACATCCACGCCACCGAGCGATTAGACCGCGAGGAGCAGAGCTACTACACCCTCAGAGCTCAGGCCCGGGACCGGCTCACCAACCACCTGCTGGAATCCGAGTCAGAGTTTGTCATCAAAGTCCAGGATATCAACGACAGTGAACCCAAGTTCCTGGAAGGGCCCTATATCGGGAGTGTGGGAGAGCTTTCACAAATagGAACATCGGTGATGAAGGTCACTGCGTCGGATGCAGATGATCCTACATACGGGAGCAGTGCCAGGGTTGTGTACAGCGTGCTGGACGGAGAGAGGTTCTTCacagtggacagacagacagGACTGATTCGGACGGCCGTGGCAGATCTGGACCGGGAGAAGCAGGATCGCTATGAGCTGGTCGTCAAGGCAACTGACATGGCAGGCCAAATGGGCGGTCTCTCCGGCTCCACCACAGTGACCATAGTTATCACAGATGTTAATGACAACCCACCACGCTTTCCGCAGAAGATGTACCAGTTTTCAATGTCTGAGGGGGCAGCCGTGGGGACGCCGGTGGGGAGGGTGATCGCCACGGACGCAGACATGGGGGAGAACACAGACATGAGCTACCTGATCAAAGATGAGGAGGGCGGGGAACTCTTCAAAGTCACCACCGACAGTGACACGCAAGAGGCCATCATCACCATCAAAAAGGCATTGGACTTTGAGAGCAAGCGCACACACAACGTGGTGGTGGAGGCTGTCAACAAGCACGTAGACCCCCGCTTTTCGGAGCTGGGTTCTTTTCGGGACCAGACCATCGTGCGGGTCAGTGTAAACGACATTGATGAGCCGCCTGTCTTCCACCCTGCTGAGGGAACCATCTTGGAGGTCCAGGAGGATGCTAGGCTAGGGGCGGTGGTGGGCACTGTGACTGCCAAGGACCCGGACATGGAGAACGCACCTGTCAGGTACTCTATTGACCAGAGTACGGACCAGGAGCAGATCTTCCACATTGATCCAGTTTCGGGTGCCATCACGCTGGGCAATATTCTGGACCGAGAGACGGCTGGCTGGCACAACATTACTGTGATGGCAGTGGAAGCAGATAATGTATCCCAGATATCCCATTCGTCAGTGAGTATTCGTATCCTGGATGTGAATGACAACCCTCCTGAACTGGCCACGCCCTATGAGGCATCTATCTGTGAGGATGCCAAGCCGGGTCAGTGTCATGGAATTGCTGGCCTTACTGACTAGTGCTTCTGCAATCCCGGCTACAGCATCTGATAGGGGGTCACTGTCCGACATCCCTGCCTGCACTGTGGGATAAACAAACTGCTTTTATTTGAGACAGATGTCTCCCACTACATATCATATGTCTACAATTCATCTTTTGTCATTCCTTATCATTGTAGGCTAattaatactgtatgtatttacctTGATCATTATCCACACCATCACCATATCCGTGGGTGTCGGTGGTGGAGAGGGTCAATCCAATCAGCTCCTCCCAAGGAGTGTGGTGGATCTTCGTGCTTGGCCCTCCACTGGTCGCACAGAACAAGATCCTATGGTTCGACAATCTGGACTTTACGGCAGTTTGGATGTCTCTTTTGCAACTTGTCAGGGCGCTCATCCAGCCTAATACTGAATGCCATATTTGTTGTTTTCTACTGGAGTCACTTTTAAGCGTATAGTAAATAAATAGAGCGAGTCACATCAGTGGCCAGTATCTCCAGCTCCTCGCTGGCGAAATTGGTTTGTGTCTTTTTTCCATCTATTCTATGGTGGTTCTAGACTACTAGTCATACTGATAACCTTAAATAGCCCAGTATTCCATTCCATCTAGTTGAAACAATTGTTTACAAGTCGGGTGATAGCCCTTCATTTACCATGATGATAACCCCACTGAAATGGGCAAGCTGCAGCTGTTAATTTAATTTTACTTGTGCAATGTAATCCCTGAAATTGAGTCAAGCTGCCCAACCACCTGCACAAGTAAGAAATTGCCTATATTAGGCTTTGTGCACCCATAGTTTCAAATATGCAAATTAAAATAGCTTACGGTCAAGCACTATCCAGGTTCTAAATGTCAACTTAAATTTTATTCGATTTGACAGCCAAAGAAAGATATTACAATTTTAATCTGGGATAGCCTGCTTTATGTTTCAATAACAGATTTGTATTCTTATTTCATGGTGACAGTGTCCTGTATGTTAACTTtgactttcaaaataaaagtagtgaggtTCTTGA
>XM_036949886.1
ATGGCTACCTGTTGGAGACTGGGAGCTTGTAGCCTGTTGGTGGCCCTTTGGCTTTTGCATTGCTGTAGTTGTGGATGGTCAGAGACCACAAGGACTAATGGCGTGGCCAAGGGTGAAACGAAGGAGCAGGAGCTCATGTCCCATGAACGAGTGAAGAGAGGATGGGTGTGGAACCAGTTCTTTGTGGTGGAGGAGTACACAGGCACAGAACCACTCTACGTTGGAAAGATCCACACAGATTCGGACGAGGGCGAGGGGAACATCAAGTACACCATCTCCGGGGAAGGGGCGGGCACGATCTTCATCATCGACGAGCTGACGGGCGACATCCACGCCACCGAGCGATTAGACCGCGAGGAGCAGAGCTACTACACCCTCAGAGCTCAGGCCCGGGACCGGCTCACCAACCACCTGCTGGAATCCGAGTCAGAGTTTGTCATCAAAGTCCAGGATATCAACGACAGTGAACCCAAGTTCCTGGAAGGGCCCTATATCGGGAGTGTGGGAGAGCTTTCACAAATagGAACATCGGTGATGAAGGTCACTGCGTCGGATGCAGATGATCCTACATACGGGAGCAGTGCCAGGGTTGTGTACAGCGTGCTGGACGGAGAGAGGTTCTTCacagtggacagacagacagGACTGATTCGGACGGCCGTGGCAGATCTGGACCGGGAGAAGCAGGATCGCTATGAGCTGGTCGTCAAGGCAACTGACATGGCAGGCCAAATGGGCGGTCTCTCCGGCTCCACCACAGTGACCATAGTTATCACAGATGTTAATGACAACCCACCACGCTTTCCGCAGAAGATGTACCAGTTTTCAATGTCTGAGGGGGCAGCCGTGGGGACGCCGGTGGGGAGGGTGATCGCCACGGACGCAGACATGGGGGAGAACACAGACATGAGCTACCTGATCAAAGATGAGGAGGGCGGGGAACTCTTCAAAGTCACCACCGACAGTGACACGCAAGAGGCCATCATCACCATCAAAAAGGCATTGGACTTTGAGAGCAAGCGCACACACAACGTGGTGGTGGAGGCTGTCAACAAGCACGTAGACCCCCGCTTTTCGGAGCTGGGTTCTTTTCGGGACCAGACCATCGTGCGGGTCAGTGTAAACGACATTGATGAGCCGCCTGTCTTCCACCCTGCTGAGGGAACCATCTTGGAGGTCCAGGAGGATGCTAGGCTAGGGGCGGTGGTGGGCACTGTGACTGCCAAGGACCCGGACATGGAGAACGCACCTGTCAGGTACTCTATTGACCAGAGTACGGACCAGGAGCAGATCTTCCACATTGATCCAGTTTCGGGTGCCATCACGCTGGGCAATATTCTGGACCGAGAGACGGCTGGCTGGCACAACATTACTGTGATGGCAGTGGAAGCAGATAATGTATCCCAGATATCCCATTCGTCAGTGAGTATTCGTATCCTGGATGTGAATGACAACCCTCCTGAACTGGCCACGCCCTATGAGGCATCTATCTGTGAGGATGCCAAGCCGGGTCAGctCATTCACTCTATCAGCGTGGTGGATAGGGACGAGCCGCAGTTGGGCCACCGCTACTACTTCACCCTGGCACCGGAGGCCACCAACAACCGCCACTTCACCCTGTGGGATGTCAAAGACAATACTGCGGGAATCCGGACACAGCGCTCAGGCTTCAACCGCCACGAGCAGAACGTCTACCTTCTGCCTATCCTGGTAGTGGATAGCGGGCCTCCCGCCCTGAGCTCCACGGGCACCTTGACCATCCACGTGTGTGGCTGTGACCCGGAGGGCACCATCCAGTCCTGCAATGCCACCGCCTACGCCATTAGCACCTCACTCAGTCCCGGGGCCCTCATAGCCCTACTGGTCTGCATGCTCATACTCATTGTCCTGGTGCTGCTAATCCTAACCCTGAAGCGTCACCGCAAGGGCCAGAGCATGTCGGAGGATGAGGAGGACATGCGCGACAATGTCATCAAGTACAACGATGAGGGTGGCGGCGAGCAGGACACGCAGGCCTACGACATGAGTACCCTGCGCAACCTCTTTGACTTTCCAGAGGCTAAGGGTGGCTCGTCCGAGTCAGGCCCTGAACTACGCACGCTGCCCCAGTGGATTCAGGGGCAGATGAGTGGTGACGGCGAGGCGGCCGACTTTTCCCTCTTCAAGGGCTACATCCGCAAGAAGGTGGAGCAGACAGATGGCGACCTGTCGGTGCCGCCCTACGACTCATTCCAGACGTACGCCTTCGAGGGAAACAGCTCGCCagccctctctctcagctccatcCACACCCTGTCCACCACATCTGATCAGGATTTCTCCTACCTCAGCGACTGGGGGCCGCGCTTCAGGCAACTGGCGGGATACTATGCCCCGGGACATCCTGAGGAAGACGGCTCCTAGCGGTGTCCTCGGCCCAGACCCTTTCTCCTTTTCCATCCCCAGCACTGTATCAAGAGCCCAGTGTCAAAACTGTCCTAAAAAGCACTCCTCCAACTCCTTCAGAGCAACAGAACTGAATCCCAGTCAGTGTGAGTCGGAAATcaatttggtcaacaacaaaaaatcttaTTTCGCAACTTCAAGTTTGACTTTTTTTCAAAGAGAAACATTGTGTTTTCACATGGTTTGAAACGTCATGGTGAAAGGTGGGCTGATTAAATGAGGGATTAAAGGAGGTGTTATCCATTcactattccctttacagtaAAGAACAAAGGAGTAAGACGTAATACAATATAAGTGGTGCGCCACAGGTTAcaatacaattacattttacatttgtttCTGGGTATTTTCTGTCTGGAGTCAAAGACTGGTCCATTTTTAGCTTTGTGAGTGTGGAGGCtctgaggacattcagagaaatGAACGTTATACCTCAGCAGGGGGTTAATATGTATGTGTgataaatatgtatttatttatgaacaaatattaatgtatttattccttttgtatttatgtatttattttgtccATAATCACCGCACCACTTGTAACAATGGACATCAATGAAGAATGATACAGAAATATTTATTATGGTGAAAAAAAACCTGAGGAGAGAAGAGCTTCTGTATAAGCACGTAGCAGAGGACTTCACAAAGGTGATATTTGGGTCACAAACAACTACAGTCTTGGaaatatttgtattcattttttagGAACACTTTTGTAAAATAAGACAACAAGACTGGAAGACGGAGCGCGACTAAAAAGAAAAGGGTCAGAGAACAAAAGGATGAATCGATTCAGTGCAAAGATTGGTTTTGGTTTGATATGCTTTCAATGTATTGTAAAGATTTCTAAGGTGTTATGAAGGATGCGGGACATTAGGTGTTAACTGGGTTTTTGCTTGGCTTTTTCACCGCCATTTAAAAGGCAATAAGGCACAATCCGCACAAGTGATTCAAGACTATACTGTATGAAATGACTGTGTTTTTTTCATGGAGTTGGGTATTTGTTCATTCCAgaatttgtatgtgtgtgtccaactTGTTTTCTATTCCAGAAGATTTGATTACTTTTATTTCACAGGGTGGATGAATATGTGGGGTGACAGGTACAGAAATAAGGGATGAGTAGATGGAATTCCTCCACCCAGTATCCAAAACCTATTTAATGTTGATCTTAAACTTGCAAATGTAtggaaaataaaatcaataaaaaatgtaatga
>TU1658523
CTAGGACTGCTCCTCATAGGGGATCATATATTTTCGAAAAACACAAGTCGGATAAAAAGGAACAGTCTCTCCCAACTTGCTACCCGAGTCTGCTTTGACATTTTCACACGTAAAAAGGGCTGCggggagatggagagtgaaaTTAGGGGTGACATGAAGAGGACCGGAAGACCTGAAGAGTATAATTTTCTGTAAAGAAACCAGCAAGGTTTTGCCATTTCCTTCAGCACTTTATGGGGACCCTCTCTATGCCTGAATCATCGAGAAGAATTCTGGAATGGAATAATATCTAAGCCAATGGAGTCCCATGAAGGATACTGTTCCCTAATACTGCAATGTAGTGAAAAGAGACGGTCGCTGGACGCTTGTAATCTGTGGATCTGA
>TU1658524
ATCTCTGTTACCAGAATGGATTTGATACCAGTGTAGACAGACAGTGGAGATAAGTCTGGAAAAACTCAATGGCGAAGATCACACGGGAAAGATAAGTCTGTTTCAAAATGATTTGTCAAGTTTCTTCTGCAAAGAGAAAAAACATTCTGCAGTCTTTCTAAATTCCCCGAATCATGGCGTGCCATGACATGCCCTGCATCCTGAGACGGAACTATTTAAGACAATTGAATACTCAAGAATCTTGTGAATTAATCCAAGAGCCCTAGAACAGAAATCTTGGTTGTCCTTGGTGTGTTTGTTCTTCAACATTGCTGGCTTGAGGACTCTTTTCACCTCTTCTGTAATCTCCGTCGTATGTAGAGCCAATCAGGATTTTCCAAAATGGCTACCTGTTGGAGACTGGGAGCTTGTAGCCTGTTGGTGGCCCTTTGGCTTTTGCATTGCTGTAGTTGTGGATGGTCAGAGACCACAAGGACTAATGGCGTGGCCAAGGGTGAAACGAAGGAGCAGGAGCTCATGTCCCATGAACGAGTGAAGAGAGGATGGGTGTGGAACCAGTTCTTTGTGGTGGAGGAGTACACAGGCACAGAACCACTCTACGTTGGAAAGATACAAGATGTGTTAGACTCAGTTAAACCCACACTCTGTGAGATGTGCATGCCACCAAACAGTGGGCCACCAACAAAAAACGTAAGCAATTGAGCGAATGCATTCCATGACATTTTCACATGGACTTCTGTTATATATCTGTTGTGATATATCTGTAGTGCTCAAGGAA

Function

symbol description
cdh22 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

NR:

description
cadherin-22-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568462.2 False 3724 mRNA 0.51 13 40767465 41083544
XM_036949887.1 False 3866 mRNA 0.47 11 40767467 41055778
XM_036949886.1 False 3678 mRNA 0.50 11 40949923 41084819
TU1658523 False 384 lncRNA 0.44 3 40767508 40949028
TU1658524 True 778 TUCP 0.44 2 40949542 40968066

Neighbor

gene id symbol gene type direction distance location
LOC110493184 LOC106565288 coding upstream 292776 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 382045 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 388516 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 399725 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 497630 39948626 ~ 40269835 (+)
LOC110493894 LOC106565283 coding downstream 445354 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 557055 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 737543 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 945171 42029990 ~ 42108742 (+)
LOC110493907 LOC106565273 coding downstream 1244746 42329565 ~ 42407845 (+)
G1449203 NA non-coding upstream 8403 40758842 ~ 40759062 (+)
G1449144 NA non-coding upstream 48023 40719024 ~ 40719442 (+)
G1449142 NA non-coding upstream 48663 40718122 ~ 40718802 (+)
G1449046 NA non-coding upstream 107140 40651709 ~ 40660325 (+)
G1448927 NA non-coding upstream 199480 40567710 ~ 40567985 (+)
G1449646 NA non-coding downstream 4564 41089383 ~ 41089616 (+)
G1449823 NA non-coding downstream 124960 41209779 ~ 41210094 (+)
G1449847 NA non-coding downstream 137662 41222481 ~ 41222687 (+)
G1449858 NA non-coding downstream 146766 41231585 ~ 41231814 (+)
G1449860 NA non-coding downstream 147066 41231885 ~ 41232090 (+)
G1447998 NA other upstream 967229 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1340565 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2456601 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 3178738 37538220 ~ 37588797 (+)
chd6 NA other upstream 3327053 37406926 ~ 37514061 (+)
G1450387 NA other downstream 708064 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2243767 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2244280 43329099 ~ 43409816 (+)
G1452359 NA other downstream 2397441 43482260 ~ 43483693 (+)
G1449362 NA non-coding downstream 13528 40962556 ~ 40976384 (+)
G1449408 NA non-coding downstream 126067 41075095 ~ 41075326 (+)
G1449409 NA non-coding downstream 126518 41075546 ~ 41075871 (+)
G1449413 NA non-coding downstream 130913 41079941 ~ 41080161 (+)
LOC110493893 cdh22 other downstream 514 40767465 ~ 41084819 (+)

Expression


Co-expression Network