LOC110493915 (LOC106565264)


Basic Information

Item Value
gene id LOC110493915
gene name LOC106565264
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 42770305 ~ 42776295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568513.2
CTTGCAATTTGAGACTTGCAATTTGAGACGCTTTTCTCTGCCACGTAGCTTCAACTTCCTGATGTAAAGTCATACATTGTGTTGCTCCGAAGTTAACCAAATGCATCTTCACCAGAAACATTGTAAGAACATGAGTCGAGAAATGCCAACATGGACTGAGCCTTGCTTgaactgaaatgtgtttttagtTGAAGGAATAGCAACTCAATATTATGGGTTGCTCCACCCTGGCCCTCTCCAGTGTGGTGTCCACGCTTGGTGGCCTGGTCTTTGGTTACGAGCTGGGGATTATCTCCGGGGCTCTCCTCCAGCTCCAGGCCGAGTTCCGACTCACTTGTGTCCAGCAGGAGGCTGTGGTCAGTGCCCTTCTGATCGGGGCCTTGCTGGCCTCCCTGGTTGGTGGTTGGCTGATTGACCGCTACGGCCGGAGGAACTCCATCCTCCACAGCAACGTCCTCATCCTGGCCGGGAGTTTGATTCTGGTCAGCAACTCTTACTTGGCACTGGTGGTGGGCAGAATCACGGTGGGCTTCGCCATGTGCATCTCCTCCATGTCCTGCTGTATCTTTGTATCGGAGATGGTCACCCCCAAGCACAGAGGTTTTTTGGTGACTCTGTACGAAGTTGGTATCACCGTGGGCATCCTGGGAGCTTACGCCATAAACTATATCCTGTCCGATGCCAGGCAGGGATGGAAGTATATGTTTGGGTTAGCCATCGTGCCTACTTTGGCTCAGTTTGTCTCCATTTGGTTTCTCCCGTCCAATGCCGGAACACCTGCAGCAGGCCAAAGGGCAGGTGCTCAAAGCCAAAGAGGTCTTATTCATTCCCTTGAGAATCCCAAAGTGGAGAATTCGGCACATGTTTCCAACATACTTGATAACCCACAGTACAGCTTTCTGCACCTCTTTCAACAGAAGGACAACATGAGGACCAGGACTACCATTGCACTAGGCTTGGTGATCTTTCAACAGTTCACAGGTCAGCCCAATGTGCTCTTCTACTCCTCAACCATCTTTCAGTCAGTGGGCTTCAAGAGCAATGCCTCGGCAGTGCTGGCGTCCTTGGGCTTGGGGGTAGTCAAGGTGATCGCCACCTTGGTCTCCATGGTGTTTGCTGATAGGGTTGGCAGGAGGCCTCTGCTCATTGGTGGATGTATAGTAATGTCCGTGTGTTTGATGACCATAGGACTTTTGAGCGGGCGTTCAGTGGTCAACACCAACACACCCTGTAATGCTGGGGATTATGTCAATAACAGCACACCCCTATCGCAGCTAACGGTAGAAAATCAATCAAGCTTTGACATTTCTGTCAGTCAACGCCTTGGACGTCACGATAGGACCGAAGTAACGGATATCGCTTACGATGCTGAGAGATCGTTTGGTACTTTGATGCCAGTGGCTTCTCCAGCTGTCCACAATGGAGTGGTGAACTGGATAATTTTATTCTGTATGATGGCAGTCGTCAGTGCATACTCAGTTGGATTTGGACCAATGACCTGGCTCATTTTGAGTGAAATATTTCCTGCTGCGGTCAGAGGGAGAGCGTTTGCCTTCACAAACTGCTTCAACTGGGCTGCCAACTTAATTGTCACATTCTCCTTCTTGAATGTCATCAATGTGATTGGTTTGTCTGGGACATTCCTTTCTTATGGGCTGATTGGAGTGGGAGCGGTGGTGTTCTTTTACTTCATGTTACCAGAGACCAAAGGGAAATCACTGGAGCAAATAGACAGGGAGCTCTGTTTGAAAAGGGTCCACAACAGTGAAGAATGCTGTAACATCCTTAGCAGGAGAATCACTTCCCCCGGGTATCAAAGAGTGCACATTGTTAGCTCAGCAACCCAATGTTGAGCAAGTCTACCCAAGTGTTACATtctaagtatatatatatatatttttacactcTTTTAACCTGACTGAAACAACGGACTGATGCGAATGGCGGTACTGAAAAGTTGAGCGTAGTGATCCGTCCAGCTACCATAGCAGAGCTTACGACATGACTGAACAATGTTTTTATTGCACTGGTATTTCAAACTTATTTTTCCCGAATGCTTGTGAACAATTCTGTCACTTGTTTTCACAAATGAAAAACAATGTTTTTGCATGTCACTTTGCTCTTTCTACTACTTTTCAAGTCTGCAAGAAAAATAACAGCAGTTTTCCATTTCCATCAAGAGTCAACCTGTACGGGGGTCATCATCTGGCATCACCATCATCAGTTTAGGAGTCTGAGATCGCTGATCCACTGAGGGAGTCTTGCTCTAACCAATGACAATGTTGTCCTATCCTTCACTTTGTTCTATGTATAACCCAAGGGTGCCTAGCCTACAATGTTTATGTTTGTAAAATGTTTAACCATTTAGAGAACCATAATGGAAATACGTTTTCAAACTTTTGTGTCATCCTCAAAGATTTTAAATGCATTATCCAcgtgtggttgtattgtgtttGAAATCAAATAAATCTATAACCTCGACTCCA
>XM_036949906.1
CTTGCAATTTGAGACTTGCAATTTGAGACGCTTTTCTCTGCCACGTAGCTTCAACTTCCTGATGTAAAGTCATACATTGTGTTGCTCCGAAGTTAACCAAATGCATCTTCACCAGAAACATTGTAAGAACATGAGTCGAGAAATGCCAACATGGACTGAGCCTTGCTTgaactgaaatgtgtttttagtTGAAGGAATAGCAACTCAATATTATGGGTTGCTCCACCCTGGCCCTCTCCAGTGTGGTGTCCACGCTTGGTGGCCTGGTCTTTGGTTACGAGCTGGGGATTATCTCCGGGGCTCTCCTCCAGCTCCAGGCCGAGTTCCGACTCACTTGTGTCCAGCAGGAGGCTGTGGTCAGTGCCCTTCTGATCGGGGCCTTGCTGGCCTCCCTGGTTGGTGGTTGGCTGATTGACCGCTACGGCCGGAGGAACTCCATCCTCCACAGCAACGTCCTCATCCTGGCCGGGAGTTTGATTCTGGTCAGCAACTCTTACTTGGCACTGGTGGTGGGCAGAATCACGGTGGGCTTCGCCATGTGCATCTCCTCCATGTCCTGCTGTATCTTTGTATCGGAGATGGTCACCCCCAAGCACAGAGGTTTTTTGGTGACTCTGTACGAAGTTGGTATCACCGTGGGCATCCTGGGAGCTTACGCCATAAACTATATCCTGTCCGATGCCAGGCAGGGATGGAAGTATATGTTTGGGTTAGCCATCGTGCCTACTTTGGCTCAGTTTGTCTCCATTTGGTTTCTCCCGTCCAATGCCGGAACACCTGCAGCAGGCCAAAGGGCAGGTGCTCAAAGCCAAAGAGGTCTTATTCATTCCCTTGAGAATCCCAAAGTGGAGAATTCGGCACATGTTTCCAACATACTTGATAACCCACAGTACAGCTTTCTGCACCTCTTTCAACAGAAGGACAACATGAGGACCAGGACTACCATTGCACTAGGCTTGGTGATCTTTCAACAGTTCACAGGTCAGCCCAATGTGCTCTTCTACTCCTCAACCATCTTTCAGTCAGTGGGCTTCAAGAGCAATGCCTCGGCAGTGCTGGCGTCCTTGGGCTTGGGGGTAGTCAAGGTGATCGCCACCTTGGTCTCCATGGTGTTTGCTGATAGGGTTGGCAGGAGGCCTCTGCTCATTGGTGGATGTATAGTAATGTCCGTGTGTTTGATGACCATAGGACTTTTGAGCGGGCGTTCAGTGGTCAACACCAACACACCCTGTAATGCTGGGGATTATGTCAATAACAGCACACCCCTATCGCAGCTAACGGTAGAAAATCAATCAAGCTTTGACATTTCTGTCAGTCAACGCCTTGGACGTCACGATAGGACCGAAGTAACGGATATCGCTTACGATGCTGAGAGATCGTTTGGTACTTTGATGCCAGTGGCTTCTCCAGCTGTCCACAATGGAGTGGTGAACTGGATAATTTTATTCTGTATGATGGCAGTCGTCAGTGCATACTCAGTTGGATTTGGACCAATGACCTGGCTCATTTTGAGTGAAATATTTCCTGCTGCGGTCAGAGGGAGAGCGTTTGCCTTCACAAACTGCTTCAACTGGGCTGCCAACTTAATTGTCACATTCTCCTTCTTGAATGTCATCAATGTGATTGGTTTGTCTGGGACATTCCTTTCTTATGGGCTGATTGGAGTGGGAGCGGTGGTGTTCTTTTACTTCATGTTACCAGAGACCAAAGGGAAATCACTGGAGCAAATAGACAGGGAGCTCTGTTTGAAAAGGGTCCACAACAGTGAAGAATGCTGTAACATCCTTAGCAGGAGAATCACTTCCCCCGGGTATCAAAGAGTGCACATTGTTAGCTCAGCAACCCAATGTTGAGCAAGTCTACCCAAGTGTTACATtctaaAGTCAACCTGTACGGGGGTCATCATCTGGCATCACCATCATCAGTTTAGGAGTCTGAGATCGCTGATCCACTGAGGGAGTCTTGCTCTAACCAATGACAATGTTGTCCTATCCTTCACTTTGTTCTATGTATAACCCAAGGGTGCCTAGCCTACAATGTTTATGTTTGTAAAATGTTTAACCATTTAGAGAACCATAATGGAAATACGTTTTCAAACTTTTGTGTCATCCTCAAAGATTTTAAATGCATTATCCAcgtgtggttgtattgtgtttGAAATCAAATAAATCTATAACCTCGACTCCA
>XM_036949905.1
CTTCCTGATGTAAAGTCATACATTGTGTTGCTCCGAAGTTAACCAAATGCATCTTCACCAGAAACATTAGTCGAGAAATGCCAACATGGACTGAGCCTTGCTTgaactgaaatgtgtttttagtTGAAGGAATAGCAACTCAATATTATGGGTTGCTCCACCCTGGCCCTCTCCAGTGTGGTGTCCACGCTTGGTGGCCTGGTCTTTGGTTACGAGCTGGGGATTATCTCCGGGGCTCTCCTCCAGCTCCAGGCCGAGTTCCGACTCACTTGTGTCCAGCAGGAGGCTGTGGTCAGTGCCCTTCTGATCGGGGCCTTGCTGGCCTCCCTGGTTGGTGGTTGGCTGATTGACCGCTACGGCCGGAGGAACTCCATCCTCCACAGCAACGTCCTCATCCTGGCCGGGAGTTTGATTCTGGTCAGCAACTCTTACTTGGCACTGGTGGTGGGCAGAATCACGGTGGGCTTCGCCATGTGCATCTCCTCCATGTCCTGCTGTATCTTTGTATCGGAGATGGTCACCCCCAAGCACAGAGGTTTTTTGGTGACTCTGTACGAAGTTGGTATCACCGTGGGCATCCTGGGAGCTTACGCCATAAACTATATCCTGTCCGATGCCAGGCAGGGATGGAAGTATATGTTTGGGTTAGCCATCGTGCCTACTTTGGCTCAGTTTGTCTCCATTTGGTTTCTCCCGTCCAATGCCGGAACACCTGCAGCAGGCCAAAGGGCAGGTGCTCAAAGCCAAAGAGGTCTTATTCATTCCCTTGAGAATCCCAAAGTGGAGAATTCGGCACATGTTTCCAACATACTTGATAACCCACAGTACAGCTTTCTGCACCTCTTTCAACAGAAGGACAACATGAGGACCAGGACTACCATTGCACTAGGCTTGGTGATCTTTCAACAGTTCACAGGTCAGCCCAATGTGCTCTTCTACTCCTCAACCATCTTTCAGTCAGTGGGCTTCAAGAGCAATGCCTCGGCAGTGCTGGCGTCCTTGGGCTTGGGGGTAGTCAAGGTGATCGCCACCTTGGTCTCCATGGTGTTTGCTGATAGGGTTGGCAGGAGGCCTCTGCTCATTGGTGGATGTATAGTAATGTCCGTGTGTTTGATGACCATAGGACTTTTGAGCGGGCGTTCAGTGGTCAACACCAACACACCCTGTAATGCTGGGGATTATGTCAATAACAGCACACCCCTATCGCAGCTAACGGTAGAAAATCAATCAAGCTTTGACATTTCTGTCAGTCAACGCCTTGGACGTCACGATAGGACCGAAGTAACGGATATCGCTTACGATGCTGAGAGATCGTTTGGTACTTTGATGCCAGTGGCTTCTCCAGCTGTCCACAATGGAGTGGTGAACTGGATAATTTTATTCTGTATGATGGCAGTCGTCAGTGCATACTCAGTTGGATTTGGACCAATGACCTGGCTCATTTTGAGTGAAATATTTCCTGCTGCGGTCAGAGGGAGAGCGTTTGCCTTCACAAACTGCTTCAACTGGGCTGCCAACTTAATTGTCACATTCTCCTTCTTGAATGTCATCAATGTGATTGGTTTGTCTGGGACATTCCTTTCTTATGGGCTGATTGGAGTGGGAGCGGTGGTGTTCTTTTACTTCATGTTACCAGAGACCAAAGGGAAATCACTGGAGCAAATAGACAGGGAGCTCTGTTTGAAAAGGGTCCACAACAGTGAAGAATGCTGTAACATCCTTAGCAGGAGAATCACTTCCCCCGGGTATCAAAGAGTGCACATTGTTAGCTCAGCAACCCAATGTTGAGCAAGTCTACCCAAGTGTTACATtctaagtatatatatatatatttttacactcTTTTAACCTGACTGAAACAACGGACTGATGCGAATGGCGGTACTGAAAAGTTGAGCGTAGTGATCCGTCCAGCTACCATAGCAGAGCTTACGACATGACTGAACAATGTTTTTATTGCACTGGTATTTCAAACTTATTTTTCCCGAATGCTTGTGAACAATTCTGTCACTTGTTTTCACAAATGAAAAACAATGTTTTTGCATGTCACTTTGCTCTTTCTACTACTTTTCAAGTCTGCAAGAAAAATAACAGCAGTTTTCCATTTCCATCAAGAGTCAACCTGTACGGGGGTCATCATCTGGCATCACCATCATCAGTTTAGGAGTCTGAGATCGCTGATCCACTGAGGGAGTCTTGCTCTAACCAATGACAATGTTGTCCTATCCTTCACTTTGTTCTATGTATAACCCAAGGGTGCCTAGCCTACAATGTTTATGTTTGTAAAATGTTTAACCATTTAGAGAACCATAATGGAAATACGTTTTCAAACTTTTGTGTCATCCTCAAAGATTTTAAATGCATTATCCAcgtgtggttgtattgtgtttGAAATCAAATAAATCTATAACCTCGACTCCA

Function

NR:

description
solute carrier family 2, facilitated glucose transporter member 10

GO:

id name namespace
GO:0048731 system development biological_process
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
K08147 SLC2A10, GLUT10; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568513.2 False 2486 mRNA 0.46 6 42770305 42776295
XM_036949906.1 False 2187 mRNA 0.48 7 42770305 42776295
XM_036949905.1 True 2421 mRNA 0.46 6 42770359 42776295

Neighbor

gene id symbol gene type direction distance location
LOC110493912 LOC106565266 coding upstream 8196 42740378 ~ 42762109 (+)
LOC110493911 LOC106565269 coding upstream 137940 42599720 ~ 42632365 (+)
LOC110493909 arfrp coding upstream 237759 42528749 ~ 42532546 (+)
LOC110493908 LOC106565271 coding upstream 253349 42435328 ~ 42516956 (+)
LOC110493907 LOC106565273 coding upstream 362460 42329565 ~ 42407845 (+)
LOC110493924 LOC106591969 coding downstream 174233 42950528 ~ 42952198 (+)
LOC110493836 LOC106565017 coding downstream 483871 43260166 ~ 43270260 (+)
LOC118940459 NA coding downstream 543502 43319797 ~ 43330019 (+)
LOC118940518 NA coding downstream 547233 43323528 ~ 43323647 (+)
LOC110493832 LOC107715185 coding downstream 554134 43330429 ~ 43330803 (+)
G1451805 NA non-coding upstream 6079 42753082 ~ 42764226 (+)
G1451784 NA non-coding upstream 40503 42729602 ~ 42729802 (+)
G1451777 NA non-coding upstream 45849 42724219 ~ 42724456 (+)
G1451776 NA non-coding upstream 46090 42724011 ~ 42724215 (+)
G1451578 NA non-coding upstream 72585 42637223 ~ 42697720 (+)
G1451817 LOC106565263 non-coding downstream 13341 42789636 ~ 42790325 (+)
G1451838 NA non-coding downstream 40250 42816545 ~ 42816745 (+)
G1451842 NA non-coding downstream 46577 42822872 ~ 42823113 (+)
G1451851 NA non-coding downstream 54901 42831196 ~ 42831396 (+)
G1451832 NA non-coding downstream 62378 42838673 ~ 42866761 (+)
G1450387 NA other upstream 879790 41792883 ~ 41890515 (+)
LOC110493897 LOC106565282 other upstream 1076587 41641874 ~ 41706180 (+)
LOC110493893 cdh22 other upstream 1802239 40767465 ~ 41084819 (+)
G1447998 NA other upstream 2970069 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 3343405 39342991 ~ 39426900 (+)
G1451948 LOC570405 other downstream 552291 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 552804 43329099 ~ 43409816 (+)
G1452359 NA other downstream 705965 43482260 ~ 43483693 (+)
G1452362 NA other downstream 714879 43491174 ~ 43492068 (+)
G1452369 NA other downstream 765369 43508719 ~ 43565770 (+)

Expression


Co-expression Network