Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110493836 |
| gene name | LOC106565017 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43260166 ~ 43270260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568344.2 | True | 1008 | mRNA | 0.47 | 5 | 43260166 | 43270260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493924 | LOC106591969 | coding | upstream | 307968 | 42950528 ~ 42952198 (+) |
| LOC110493915 | LOC106565264 | coding | upstream | 483871 | 42770305 ~ 42776295 (+) |
| LOC110493912 | LOC106565266 | coding | upstream | 498057 | 42740378 ~ 42762109 (+) |
| LOC110493911 | LOC106565269 | coding | upstream | 627801 | 42599720 ~ 42632365 (+) |
| LOC110493909 | arfrp | coding | upstream | 727620 | 42528749 ~ 42532546 (+) |
| LOC118940459 | NA | coding | downstream | 49537 | 43319797 ~ 43330019 (+) |
| LOC118940518 | NA | coding | downstream | 53268 | 43323528 ~ 43323647 (+) |
| LOC110493832 | LOC107715185 | coding | downstream | 60169 | 43330429 ~ 43330803 (+) |
| LOC118940144 | LOC106024139 | coding | downstream | 62055 | 43332315 ~ 43341386 (+) |
| LOC118940451 | NA | coding | downstream | 63170 | 43333430 ~ 43334041 (+) |
| G1452048 | NA | non-coding | upstream | 7492 | 43250676 ~ 43252674 (+) |
| G1452043 | NA | non-coding | upstream | 15312 | 43244509 ~ 43244854 (+) |
| G1452038 | NA | non-coding | upstream | 18795 | 43241049 ~ 43241371 (+) |
| G1452036 | NA | non-coding | upstream | 20766 | 43239170 ~ 43239400 (+) |
| G1452035 | NA | non-coding | upstream | 21621 | 43238310 ~ 43238545 (+) |
| G1451958 | NA | non-coding | downstream | 1053 | 43271313 ~ 43272057 (+) |
| G1451953 | NA | non-coding | downstream | 1891 | 43272151 ~ 43273171 (+) |
| G1452073 | NA | non-coding | downstream | 45674 | 43315934 ~ 43318830 (+) |
| G1452087 | NA | non-coding | downstream | 50525 | 43320785 ~ 43321022 (+) |
| G1452089 | NA | non-coding | downstream | 56135 | 43326395 ~ 43326698 (+) |
| G1450387 | NA | other | upstream | 1369651 | 41792883 ~ 41890515 (+) |
| LOC110493897 | LOC106565282 | other | upstream | 1566448 | 41641874 ~ 41706180 (+) |
| LOC110493893 | cdh22 | other | upstream | 2292100 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 3459930 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 3833266 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 58326 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 58839 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 212000 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 220914 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 271404 | 43508719 ~ 43565770 (+) |
