Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940518 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 43323528 ~ 43323647 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118940518 | True | 120 | mRNA | 0.53 | 1 | 43323528 | 43323647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493836 | LOC106565017 | coding | upstream | 53268 | 43260166 ~ 43270260 (+) |
| LOC110493924 | LOC106591969 | coding | upstream | 371330 | 42950528 ~ 42952198 (+) |
| LOC110493915 | LOC106565264 | coding | upstream | 547233 | 42770305 ~ 42776295 (+) |
| LOC110493912 | LOC106565266 | coding | upstream | 561419 | 42740378 ~ 42762109 (+) |
| LOC110493911 | LOC106565269 | coding | upstream | 691163 | 42599720 ~ 42632365 (+) |
| LOC110493832 | LOC107715185 | coding | downstream | 6782 | 43330429 ~ 43330803 (+) |
| LOC118940144 | LOC106024139 | coding | downstream | 8668 | 43332315 ~ 43341386 (+) |
| LOC118940451 | NA | coding | downstream | 9783 | 43333430 ~ 43334041 (+) |
| LOC118940452 | LOC108414267 | coding | downstream | 17749 | 43341396 ~ 43342673 (+) |
| LOC118940450 | LOC101068541 | coding | downstream | 19107 | 43342754 ~ 43343223 (+) |
| G1452087 | NA | non-coding | upstream | 2506 | 43320785 ~ 43321022 (+) |
| G1452073 | NA | non-coding | upstream | 4698 | 43315934 ~ 43318830 (+) |
| G1451953 | NA | non-coding | upstream | 50357 | 43272151 ~ 43273171 (+) |
| G1451958 | NA | non-coding | upstream | 51471 | 43271313 ~ 43272057 (+) |
| G1452048 | NA | non-coding | upstream | 70854 | 43250676 ~ 43252674 (+) |
| G1452089 | NA | non-coding | downstream | 2748 | 43326395 ~ 43326698 (+) |
| G1452090 | NA | non-coding | downstream | 3071 | 43326718 ~ 43326932 (+) |
| G1452364 | NA | non-coding | downstream | 173889 | 43497536 ~ 43497760 (+) |
| G1452366 | NA | non-coding | downstream | 176247 | 43499894 ~ 43517376 (+) |
| G1450387 | NA | other | upstream | 1433013 | 41792883 ~ 41890515 (+) |
| LOC110493897 | LOC106565282 | other | upstream | 1629810 | 41641874 ~ 41706180 (+) |
| LOC110493893 | cdh22 | other | upstream | 2355462 | 40767465 ~ 41084819 (+) |
| G1447998 | NA | other | upstream | 3523292 | 39799936 ~ 39800236 (+) |
| pmepa1 | pmepa1 | other | upstream | 3896628 | 39342991 ~ 39426900 (+) |
| G1451948 | LOC570405 | other | downstream | 4939 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 5452 | 43329099 ~ 43409816 (+) |
| G1452359 | NA | other | downstream | 158613 | 43482260 ~ 43483693 (+) |
| G1452362 | NA | other | downstream | 167527 | 43491174 ~ 43492068 (+) |
| G1452369 | NA | other | downstream | 218017 | 43508719 ~ 43565770 (+) |
