Item | Value |
---|---|
gene id | LOC118940450 |
gene name | LOC101068541 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 43342754 ~ 43343223 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
histone H3-like |
id | name | namespace |
---|---|---|
GO:0006334 | nucleosome assembly | biological_process |
GO:0007596 | blood coagulation | biological_process |
GO:0000786 | nucleosome | cellular_component |
GO:0005576 | extracellular region | cellular_component |
GO:0005654 | nucleoplasm | cellular_component |
GO:0003677 | DNA binding | molecular_function |
GO:0030246 | carbohydrate binding | molecular_function |
GO:0046982 | protein heterodimerization activity | molecular_function |
id | description |
---|---|
K11253 | H3; histone H3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036949935.1 | True | 470 | mRNA | 0.61 | 1 | 43342754 | 43343223 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118940452 | LOC108414267 | coding | upstream | 81 | 43341396 ~ 43342673 (+) |
LOC118940451 | NA | coding | upstream | 8713 | 43333430 ~ 43334041 (+) |
LOC118940144 | LOC106024139 | coding | upstream | 9792 | 43332315 ~ 43341386 (+) |
LOC110493832 | LOC107715185 | coding | upstream | 11951 | 43330429 ~ 43330803 (+) |
LOC118940459 | NA | coding | upstream | 12735 | 43319797 ~ 43330019 (+) |
LOC118940456 | LOC106958509 | coding | downstream | 4167 | 43347390 ~ 43348641 (+) |
LOC118940453 | LOC107581013 | coding | downstream | 5840 | 43349063 ~ 43349732 (+) |
LOC110493838 | LOC106565014 | coding | downstream | 26167 | 43369390 ~ 43395004 (+) |
LOC118940145 | LOC106906734 | coding | downstream | 76945 | 43420168 ~ 43421815 (+) |
LOC110493837 | zgc:163040 | coding | downstream | 83945 | 43427168 ~ 43435779 (+) |
G1452090 | NA | non-coding | upstream | 15822 | 43326718 ~ 43326932 (+) |
G1452089 | NA | non-coding | upstream | 16056 | 43326395 ~ 43326698 (+) |
G1452087 | NA | non-coding | upstream | 21732 | 43320785 ~ 43321022 (+) |
G1452073 | NA | non-coding | upstream | 23924 | 43315934 ~ 43318830 (+) |
G1452364 | NA | non-coding | downstream | 154313 | 43497536 ~ 43497760 (+) |
G1452366 | NA | non-coding | downstream | 156671 | 43499894 ~ 43517376 (+) |
G1452369 | NA | non-coding | downstream | 165496 | 43508719 ~ 43565770 (+) |
G1452394 | NA | non-coding | downstream | 224178 | 43567401 ~ 43574306 (+) |
G1452398 | NA | non-coding | downstream | 256437 | 43599660 ~ 43599912 (+) |
G1450387 | NA | other | upstream | 1452239 | 41792883 ~ 41890515 (+) |
LOC110493897 | LOC106565282 | other | upstream | 1649036 | 41641874 ~ 41706180 (+) |
LOC110493893 | cdh22 | other | upstream | 2374688 | 40767465 ~ 41084819 (+) |
G1447998 | NA | other | upstream | 3542518 | 39799936 ~ 39800236 (+) |
pmepa1 | pmepa1 | other | upstream | 3915854 | 39342991 ~ 39426900 (+) |
G1452359 | NA | other | downstream | 139037 | 43482260 ~ 43483693 (+) |
G1452362 | NA | other | downstream | 147951 | 43491174 ~ 43492068 (+) |
G1452399 | NA | other | downstream | 263090 | 43606313 ~ 43606781 (+) |
G1452804 | LOC105896813 | other | downstream | 1169846 | 44513069 ~ 44520477 (+) |