si:dkey-156n14.3 (LOC106565245)


Basic Information

Item Value
gene id si:dkey-156n14.3
gene name LOC106565245
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44552913 ~ 44571070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949956.1
AATGGTTTGAACTGTGCAATAAGATACAAATAGTTCCATTCCATCGGTTTGTTATCCATCCATTCCGGCCACGGTTTACGATAAACTTTGGCGTTGCTTACCGGCTCGCCTTCCCCATTTGTGGGAAGGGCGGGCCTTGTATGCACTGCAGCCTGCTACAGGGATACCAAGATGGAAATCCAGGGGCTTTCTGATGCCCAAAACATTTACTATCAACATGGCGCCCCACGTAGAACAGGCTCGTCTCAGTTTAGGACAACGACACTTTCTCGCTCCATTTCGAACGAGAACGAAGCAGAGGACAATTTGGAATCGCACGAACtgcaaagcaacaacaacaataggCCGAGGACATCTCCATTTCGCCTGCTGGTAGAAAATGGCAGCGGTGTTTGCCTGCCCGTCTGCAAGCAGGACGGTAAAAATAATAGCCCTCTTCAAGCCCAAACAGCGAGTGTGGGACTCCGTAACGTGAATACTTTGAAAGAAAGGGAGCTAAACACACAACTGCCTCCACAAGATTTGAGGACGGGTTACAAATATGATGTTGAAAGTGGGGATAGCATATTGCAAATGGCGTTGCCTTTCTTTGAGGGGGAAGAGGAACATTCGCAGCAACTGCAAACTGCGGTTTTACGGCAGCAACATGAAGACGGCGCCTCCCTGTTGCAGTCATTGGCGAGCGAGAGCACGGCGGCCTACAGGAGCAACACCACGGTTAGCGCGAATAAAAACACAGAGGGATTGTATGTGGTTTTCAACATTGTCCAAGAGGATGGAAATGACACAAATAAAGACAGACTGGGGAATCCATCCAAAGATGGAGATACAATAATCGGTAAGAAGCCTGAAGATTCCAAAATCATTCCATGTAATTCGATGGAGGTTCAAAACACCAATACCCTTATTGAATCAGACGAGAATTTGAACAATTTAGCAGGCAGGGCCTTGAAAATAACTGCTCCTCAGTGTAGTGCATTAATTTCAAGCTCAAATAGTGAGGGTGAGGCAACTGTACCGAATGAAAAACAGTCTATGTGTTATGAAACGGAGAATGAAAACGCTGTTTTGACAAACGAATATGGCGATAACATATGCGGCCACCTTGACAACATTGACAGTGGCGCGGCAGACGAATTACTTTCTCAGCCCGAAGCTAGAGAACGCAGTGCCTTGATTTCAGAAAACACCTATATCGTGGAAATGAGCGACACGATGGACACTTCCGACTTCATTTCCGACCCTGGAACGAGCCTCTCTGCTTCCGCCAATGCAGATGGGGCCTCTGCCAACGAGACTTTCTCTGGAACCATCATGATAAACAACCAAAGCATCATAGTAACCATAGAAAACGGGATACTGACTCTAGCAGCACCTCCAGAGGGTTACACCCACAAAGATGACGGAATGGTCGGCTTGAAGGAACACCTTGGAATGAAAGACAATGAGGACATAGTGCTTCTCAACTATGACAGCGGGACCAAATCCATTGGGAAAATCAGCAATGTGGCAGTTATTCGGACTGGTCACCACGAAGAGCCTAGGCTTGGCATGTCCGCAAGCGACTCCGAACTGGCTCTGGCTGACCACTGTTCATTGTCAGAGTTTGGCGCCTCTCTGGACTCGTGCCCAGTCATCAAGCAGGAGAGTGGGACACTGTGTGCCATAAGCGAGGGTGACTTGGTGTCCCTGCGCCCAGAGGGTTCTTTCGTCGACTGTGTCGACAACGACGACTTCCAGCCTGTCAGCTTCATCGGTGCTTCAGGACTCTCCAAGAAAGGTGCCTTAGTCACAACGTACCGCTGCCCCCAGCCCGGCTGCCTCAGCACCTTCGACGCGCGCCAAAAGGTCAAGATGCACCTTCTCAACCACACTGAGGACCAGAGGCCCTTCAAATGCACCTTTGAGGGTTGCAGCTGGGCCTTCACCACCTCCTACAAGCTCAAACGCCACCTCCAGTCTCACGACAAGGTGCGGCCACACAAGTGCGAGTGGGAGGGCTGCGGCCGCCGCTTCACCACGGTCTACAACCTGAAGGCGCACGTGAAGCAGCACGACCAAGAGAACTCCTTTGTGTGCAAAATCTGCAGTGAGCGCTTCCGCAGTGCCACCCGGCTGACCAATCACCAGCGGGCCCATTTTGAACCCGAGAGGCCACACAAGTGCGAGTTTCCAGgtTGTGAGAAGACCTTCATCACCTACAGTGCCCTATTCTCCCACAACCGCACACACTTCCGCGAGACGGGCCAGTTTACCTGCACCTATCCGGGCTGCGACAAGCGCTATGACAAGGCCTGCCGCCTCAAGATCCACATGCGCAGCCACACAGGCGAGAGGCCATTCATCTGCGATTCAGAGGCCTGTggctggtccttcaccagcatgtCCAAGTTACTTAGGCACAAAAGGAAGCATGATGACGACAGGCGCTTCACCTGCCCAGAGGAGGGCTGTGGAAAGTCCTTCACCCGGGCAGAGCACCTCAAGGGCCACAGCATCACCCACCTGGGCACCAAGCCCTTTGAGTGCCACGTAGATGgTTGCAGTGCCAAGTTCTCAGCACGGAGCAGCCTGTATATCCACTCGAAGAAGCACAAGCAAGACGCGGGTAGCCTGAGGACGTGTTGCCCCGTGGCCAACTGCAGCAAGCACTTTTCCTCCCGCAGTAGCCTCAAGAGCCACATGCTCAAACACCACCACCTCAGCCCCGACGTGCTAAGCCAGCTGGAGGCCACACCCACGCTGACCCCCAGCAGCGAGCTGGTCAGCGGAGCCACTGCCACAGGAACTGGTTCGGGAGTCACCGGAAGCGACCAGCTTGCCAACCTGGACCTCAGCTCCCTGTTCTCTGCTGTGCTTGGGGGTCCTGCGCCCACCACCCACGGGGTCGGGGTGCCCGTGGGCAGCGCAGGGCCAGCAGGCTCCTTCGCCATGGACTTGTCCCTGGTCAGCTCAGGCATCCTCACCATCGACCCAGCCTCGGTTGGCACCGCCCTGGGCACGTCCGGGCACGGTGCTACCAGGGCCAAAGCCTCCGTGGACCCGCTAATCCTGGCGGCAGGGGCGGACATGGGCCACCTGGAGGGGACAGTTGGAGTCCTCCCCCCGCAGGGCACACTCAACCTGGACGACGTGCAGACAGTCACCCCCGAAGCCCTCAGCTCCCTTACGGCCCTCACCATGCAGGCTGCCACATCCACCGCAGACcatcatacactcacacacaccctcagttCCTCCAGCACATTGGCTGCCGAGCCCTCACCCCTGGCTGCGCCCCCTGGGCCCAAGCTCCTCTCGTCCCCCTCTAAGGTGACTGAGGCTGGAGGGAGCAGGGGTGGCAGCGGGCCTCTCTTGGGctgtgtggaggtgctggggcAGCAGGAGGGGGGCAAGGTGCTGACCCAGTTTGTGTTCCCTGGCAGTGGCTGCACGTTCAGCCCACAGAAAGAGCCTGAGCTCAGCCACAGCTCGGCAGTCTCGCCCTGCTCCTTCCTGGAAAGTAGTGGCTCAGCGCGGACTGACTACAGAGCTATCCAGCTGGCCAagaagaggaaacagagaggcCCCACCGCCTGCTCAGGGAGCTCAGGATTGGGTCAGAGGAAGAGTAAAGGCGGCAAGGCCAGCAGTGCCTCAGCGCCATTGGTTCCCACAAGCGCCCGTTTTGGGGAAGGTTCTGCAACTGCCAATGGGGGGCTGACTATCCGTGACCCTGTCACCGGAGCCCAGTATGTGCAGATCCAACTCTTGCAGgacgaCCCTCCCAGCGACGGAGATCTAGCCTTCCAGCTGAGCTCCCAGCCCTCCAGCTCCCACTCCCAACTCACCGTGGACCTTCCCGTCAACATCCTACAGGAACCTCCTGCTTTGACAGAGGATGACAATGGCTCGGACAACTCCCAGTTCACAGGAAGCACCATCAACCTGCAGGACCTGGAGTGAGGAGTAGAAGGGAGGAGATGGTCAGCCCAGAGCCAGGGATCAATGTCCTCTGAGAAAGATGAGGGCTAGTGGGGCGCTAGAGAAAATGGTGGATAATTGGGAGGCAGCGTTTTAACCCAAGACATCCACCGTCCCCTGCCAACTCAACAGAGAAAACAACCTCACTCTCTCCAACAATGTTATGAGACTGATGTTAAAACAACATCTTCCCCTACAAGAAGATGGTTTCTTAATCTTTCCTGCATTCAATGTTTCTGATTATCTCTGGTGTGGGGAAACGCGAGATGAGAAAGTTCTGTATATCTGGGGTGTGGATGAAGTGGAACCCAGAACCAAATGCACCTTGGGATGAATTGAATCATAAATAAGGGAAAGTTACATTTGGGGACTTTATTTCTCTCACTTTATACTGTATTTCAGAAATCCCTTTTTGTACCACAATCATTATTGCGAGAGACTGTTGTGTTATTGCACATCCAGTAGGTCCCTCGTGTCTCTTGTCAAACTGACGTTTTGTCAGTCGCCGCTACGGTGCCATATTCCAGCCACTCGTTCGCAGTGTGCTGTTGTCAGAGCTTCTGTCTAGGAGGCCTTATAGACATGAAATACTTTACTCCCAGAACCATTGAGCATATGCTTTTTGTTAGACTTTTATTTTGTTCTTACTATTTtcttttgggggagggggggggtagatTTATTTTTCTACTGCTGTGTCTTATATGAACTACGGTTGAGTGAGACTTGAGCGGTCCTTGTTGAAAACATGTTGCCGGTCCACTTGTTTATAATGTCTAATGCTTATCAATATGTCATGACTTCCATCTACTTGTTATTTATTATCTTTGGTTTACCAAATGGCTGAATCCAAACGCCAAGAGTTTGAATAAACGATCAAAGCACAATTATA
>TU1662377
CATTCAGTTGAGATAAGATGTTGTTATTTTTCCTCGTTTCTTTACATGTTCCGAGTTACGGCAGTTGTTTCGTGTGTCACGTTTTTCCCCATCTGCCTTGTAGGAAAGTAGTGGCTCAGCGCGGACTGACTACAGAGCTATCCAGCTGGCCAagaagaggaaacagagaggcCCCACCGCCTGCTCAGGGAGCTCAGGATTGGGTCAGAGGAAGAGTAAAGGCGGCAAGGCCAGCAGTGCCTCAGCGCCATTGGTTCCCACAAGCGCCCGTTTTGGGGAAGGTTCTGCAACTGCCAATGGGGGGCTGACTATCCGTGACCCTGTCACCGGAGCCCAGTATGTGCAGATCCAACTCTTGCAGgacgaCCCTCCCAGCGACGGAGATCTAGCCTTCCAGCTGAGCTCCCAGCCCTCCAGCTCCCACTCCCAACTCACCGTGGACCTTCCCGTCAACATCCTACAGGAACCTCCTGCTTTGACAGAGGATGACAATGGCTCGGACAACTCCCAGTTCACAGGAAGCACCATCAACCTGCAGGACCTGGAGTGAGGAGTAGAAGGGAGGAGATGGTCAGCCCAGAGCCAGGGATCAATGTCCTCTGAGAAAGATGAGGGCTAGTGGGGCGCTAGAGAAAATGGTGGATAATTGGGAGGCAGCGTTTTAACCCAAGACATCCACCGTCCCCTGCCAACTCAACAGAGAAAACAACCTCACTCTCTCCAACAATGTTATGAGACTGATGTTAAAACAACATCTTCCCCTACAAGAAGATGGTTTCTTAATCTTTCCTGCATTCAATGTTTCTGATTATCTCTGGTGTGGGGAAACGCGAGATGAGAAAGTTCTGTATATCTGGGGTGTGGATGAAGTGGAACCCAGAACCAAATGCACCTTGGGATGAATTGAATCATAAATAAGGGAAAGTTACATTTGGGGACTTTATTTCTCTCACTTTATACTGTATTTCAGAAATCCCTTTTTGTACCACAATCATTATTGCGAGAGACTGTTGTGTTATTGCACATCCAGTAGGTCCCTCGTGTCTCTTGTCAAACTGACGTTTTGTCAGTCGCCGCTACGGTGCCATATTCCAGCCACTCGTTCGCAGTGTGCTGTTGTCAGAGCTTCTGTCTAGGAGGCCTTATAGACATGAAATACTTTACTCCCAGAACCATTGAGCATATGCTTTTTGTTAGACTTTTATTTTGTTCTTACTATTTtcttttgggggagggggggggtagatTTATTTTTCTACTGCTGTGTCTTATATGAACTACGGTTGAGTGAGACTTGAGCGGTCCTTGTTGAAAACATGTTGCCGGTCCACTTGTTTATAATGTCTAATGCTTATCAATATGTCATGACTTCCATCTACTTGTTATTTATTATCTTTGGTTTACCAAATGGCTGAATCCAAACGCCAAGAGTTTGAATAAACGATCAAAGCACA

Function

NR:

description
zinc finger protein ZXDC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949956.1 False 4855 mRNA 0.53 10 44552913 44571070
TU1662377 True 1454 lncRNA 0.47 4 44559184 44571064

Neighbor

gene id symbol gene type direction distance location
LOC110493933 LOC106565248 coding upstream 7079 44324715 ~ 44545834 (+)
mtmr14 mtmr14 coding upstream 237311 44272284 ~ 44315602 (+)
setd5 LOC106565254 coding upstream 404550 44098956 ~ 44148363 (+)
LOC110493929 LOC106565256 coding upstream 455630 43985916 ~ 44097283 (+)
plxnb1b LOC106565257 coding upstream 478417 43939917 ~ 44074496 (+)
LOC110493936 LOC106565244 coding downstream 30833 44601903 ~ 44615849 (+)
LOC110493938 LOC106565241 coding downstream 198406 44769476 ~ 44797689 (+)
LOC118940467 NA coding downstream 276047 44847117 ~ 44858271 (+)
LOC110493942 bin2 coding downstream 324893 44895963 ~ 44930156 (+)
LOC110493946 LOC106565237 coding downstream 398408 44969478 ~ 45029092 (+)
G1452784 NA non-coding upstream 63154 44489549 ~ 44489759 (+)
G1452780 NA non-coding upstream 66357 44486317 ~ 44486556 (+)
G1452762 NA non-coding upstream 87511 44461171 ~ 44465402 (+)
G1452690 NA non-coding upstream 210293 44336248 ~ 44342620 (+)
G1452821 NA non-coding downstream 179 44571249 ~ 44571912 (+)
G1452827 NA non-coding downstream 1691 44572761 ~ 44573379 (+)
G1453368 NA non-coding downstream 37605 44608675 ~ 44608890 (+)
G1453370 NA non-coding downstream 39149 44610219 ~ 44610431 (+)
G1453372 NA non-coding downstream 40555 44611625 ~ 44611828 (+)
G1452804 LOC105896813 other upstream 32436 44513069 ~ 44520477 (+)
G1452399 NA other upstream 946132 43606313 ~ 43606781 (+)
G1452369 NA other upstream 989212 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1060845 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1069220 43482260 ~ 43483693 (+)
G1453605 LOC106565239 other downstream 264927 44835997 ~ 44854739 (+)
G1453889 NA other downstream 479659 45050729 ~ 45051005 (+)
G1453914 NA other downstream 498901 45069971 ~ 45070925 (+)
G1454049 NA other downstream 687405 45258475 ~ 45259571 (+)
G1454127 NA other downstream 764224 45335294 ~ 45336523 (+)

Expression


Co-expression Network