LOC118940467


Basic Information

Item Value
gene id LOC118940467
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 44847117 ~ 44858271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036987.1
TGTGAGGTGCTGAACCTCATTGGCTGGAACatgaattgctagggggctggcccatgTGGGGGAACATGTAAGGAAAATGGCACTGCACAGCTTCCAGTAAACAGTCACTTTCAAACTACGGATTTCGTAGCTAATTGAGGTAAAAAAGTCATTCttctcatagattatgcatgtatgaactacacattcaTGTCCTTAAATGCTGCTAGGGACCAGGTCATATGACTGAGGCATATGACTGACTAAGGCACACTCACTCCTAAGCCTGGCTCATGCGCTTGCTTAATCTCGTTGGCCGAGAGAGCACTCTGTAGGGCTGACCCATTCATAACCGAACTGCATGTTAGAAACCCCATAAAAACACTTCTTCCTCAATCAATCCGGTTAACAATATTTTAAAGAAGCTTGAGATTTTTTTAGATACCGTTACGTCCCAATGTAACAGCACAAAAAAGCACAAACACAAAAACTCTTATCCCCACAAAACCCCTCCCGTTCAGTTCTCACACATCTGGTGAGGCAATAGTGCTGAATCACCATGACTGTAGAGAGCCTTAAAGGTACAGGCGTGTGCACACACACCCTTGTCTGCGTCTCATTGGTGACAGTCGCGAGGGTGCATGAATGAAATGAGAGAATAGAAGAAAATAAAAGGAAAGTTAACGTGCTTCCTGATTGTAGCTGCGAGCAAGAATGGACTTGGAAGCTCCAAATACCACTCGTCATCATCAGCACACAGCTCCTCTTAATTTTCTCCATTTGGTGACCCACAGGACTTTCACAGAGTCGCTGTCTCTCAGCTAGGGATATCTGCAGAaaggctttcttgatgtctgccATGCGATCTGCGATCTCGTGCAGTCTGAACTGTAGTCGTCTCGGGTTCTAGTCGTTTGTGTTTTCATGGTAACTCCACATGGTATCGTACATCATTGGTGCCTACACCGACGATCCAAAAGTGGTCTCTAAAGCAACTAGCATCTCTGTTAGTCTCTCCACTTTGCTGGATACTATCTGCCAGTAGTAGTCTGCTCCGATCAGGACAGAGAGTTCAGGATCATCACCTCCTGTAAAGTCTGCGAGCAGCAGTCCTTTCCTCTTGAGCTCATGTTGAATCTGCTCACCAAACTTTCCTCAAGGCTGTGCATCTTTTAGTAATAATACTTGTTCACGTAAAAGTGTAACACATTAGATCATACCAAACAATAAAATAACTTTGCTAGCACAAGCCAGGCTAATCACTTGGCAGTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106601718

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036987.1 True 1252 mRNA 0.45 2 44847117 44858271

Neighbor

gene id symbol gene type direction distance location
LOC110493938 LOC106565241 coding upstream 52177 44769476 ~ 44797689 (+)
LOC110493936 LOC106565244 coding upstream 231268 44601903 ~ 44615849 (+)
si:dkey-156n14.3 LOC106565245 coding upstream 276047 44552913 ~ 44571070 (+)
LOC110493933 LOC106565248 coding upstream 301283 44324715 ~ 44545834 (+)
mtmr14 mtmr14 coding upstream 531515 44272284 ~ 44315602 (+)
LOC110493942 bin2 coding downstream 37692 44895963 ~ 44930156 (+)
LOC110493946 LOC106565237 coding downstream 111207 44969478 ~ 45029092 (+)
LOC110493947 LOC106565236 coding downstream 205411 45063682 ~ 45069411 (+)
LOC110493949 LOC106565235 coding downstream 221335 45079606 ~ 45087749 (+)
trnaq-uug-4 NA coding downstream 495207 45353478 ~ 45353549 (+)
G1453612 NA non-coding upstream 27126 44819707 ~ 44819991 (+)
G1453573 NA non-coding upstream 94991 44748104 ~ 44752126 (+)
G1453568 NA non-coding upstream 101379 44745509 ~ 44745738 (+)
G1453563 NA non-coding upstream 107494 44739308 ~ 44739623 (+)
G1453637 NA non-coding downstream 30120 44888391 ~ 44888641 (+)
G1453661 NA non-coding downstream 90216 44948487 ~ 44948877 (+)
G1453666 NA non-coding downstream 171096 45029367 ~ 45029564 (+)
G1453667 NA non-coding downstream 172946 45031217 ~ 45031471 (+)
G1453879 NA non-coding downstream 184162 45042433 ~ 45042916 (+)
G1452804 LOC105896813 other upstream 326640 44513069 ~ 44520477 (+)
G1452399 NA other upstream 1240336 43606313 ~ 43606781 (+)
G1452369 NA other upstream 1283416 43508719 ~ 43565770 (+)
G1452362 NA other upstream 1355049 43491174 ~ 43492068 (+)
G1452359 NA other upstream 1363424 43482260 ~ 43483693 (+)
G1453889 NA other downstream 192458 45050729 ~ 45051005 (+)
G1453914 NA other downstream 211700 45069971 ~ 45070925 (+)
G1454049 NA other downstream 400204 45258475 ~ 45259571 (+)
G1454127 NA other downstream 477023 45335294 ~ 45336523 (+)
G1454824 NA other downstream 997978 45856249 ~ 45858501 (+)

Expression


Co-expression Network