LOC110493989 (LOC106565315)


Basic Information

Item Value
gene id LOC110493989
gene name LOC106565315
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 47374636 ~ 47376700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568635.2
CACGCGAGGTAATAACATGCGGTCGCCAACGCGCTTCAATCTTTTGGCGCACCGAACACCCAGTTCGGTTCAGCGTGGATGCAACACATTTGTTGCAAATTCACTAAGCAATCTCAAATCCTTTGTTTGTATATTTATTTCAAATAGAATGGCTGACGAAGGGACGACAGAGCACCGTGAGTTGGTTAGTACTGCGTCCTCAGACGCGCATGGCGCTATGGACTGGCTTTCCACCTGAGAGGACACAGAGAACCCTGCGAAATACAACTCAGTGCATAAGAACCACTCCGTTCCGTTATCTCTTGGGGAGATTATGTGGAACTCGACCGAATCGGAGGGAACATCCGACGGTGGAAAGGAACTGGTCATCCGGACAGTGACGGGCTGTTTGCTCTCACTGCTCATCCTATGGACACTGCTGGGAAACCTTATGGTGTGCTCTGCCGTGCTACGAATTCGGCAATTACGAAGTAAAGTGACCAACATTTTCATCGTTTCTTTGGCTGTGTCGGATTTATTCGTTGCAATTCTGGTGATGCCATGGAAAGCTGTGGCTGAGGTGGCGGGGTATTGGCCATTTGGCACTTTTTGTAATTACTGGGTGGCGTTTGACATTATGTGCTCAACTGCGTCTATCCTCAACCTCTGCATTATCAGCGTGGATAGATACTGGGCCATATCAAGTCCGTTCCGCTACGAGAGAAAAATGACCCAACGAGTTGCCTTTGTGATGATAAGCGTCACGTGGACTTTGTCTGTTCTCATTTCATTCATACCCGTCCAACTGAACTGGCACAAAGCCAGCGAAGACGAAAGAGTCAGAGCGCATAACGCCTCCCTGGGTCAAGTAGAGGAAAACTGTGACTCTAGCCTCAACAGAGAATACGCCATATCGTCATCTTTAATAAGTTTCTACATACCCGTAGCAATTATGATTGTGACGTACACGAGAATCTATCGGATTGCTCAGATCCAAATCAGGACTATAGCGTCCCTAGAGCGCGCGGCAGAGCACGCCACAAGTTGCAGGACCAACAGACTCGAGTGCCAACACCACAATACATTGAAAACGTCTATTAAAAGGGAAACCAAAGTTTTAAAAACGTTATCGATCATTATGGGTGTTTTTGTGTGTTGTTGGTtacctttttttattttgaacTGCATAGTTCCATTCTGTGACAAACCACAGACTGACCAAGATGCAAGTCTCCCGTGCGTCAGCGAGACAACATTTGACGTCTTTGTGTGGTTTGGCTGGACTAATTCATCCATGAATCCTATTATTTACGCTTTTAACGCAGAGTTCAGAAAAGCATTTGCCAGTCTGCTGGGTTGTCGTAATTTCTGCTCCAGCACACCAGTTGAAACTGTGAATATTAGCAACGAGTTGGTCTCCTACAACCAGGACACACTTGTCCATAAAGAAATCGTGAACGCCTACGTCAATATGATCCCCAACGTAGTGGAATGCATTGAGCACGAGGACACGTTTGACAGGATATCACAGCTAACTCACAACAATGAAAATGGCACCGACTCCGTTTGTGACTTGGACGACTGTGAGGAAGAGATTAGCATCGACAGGATGACACCATTTACCCCCAATGGTTTACATTGAATTCACTTGTCTCACCTCGTGCGTAAGAGGATGTATTGCTTCAATCAGATATGTGAGATGTGGTGTTGTTGTCCCATGCTGAAAAGTGACGTACATTTGTGTCTTATAAGAGAAGATACCAGTCTTTGTTTATTCATATGATCTCTAAAAGTTCTAGCTTCTATGTATTTGGAGCAGCAGATGTATTGAAACCAGTTGCTCCAATTGGTACAAGTTACCCTAGATGGTATTCAGAAATGACTGCTTATCATAATCCGATCAATGACAGTGGGACTACCGTCCTACATACTATGGAAAATATGGTAAACCTTACAGGTGCAGTGTAGCCACATGCAGTTGTGTAAATGCCTTATTTATTCTGGGAAAGAGTGCAATATAATTTTTAAAACAAGGGGAATGTTAAAGGATTACAAAATGTTTAATTTACATGAGGCCAACATTAAA

Function

NR:

description
LOW QUALITY PROTEIN: D(1B) dopamine receptor-like

GO:

id name namespace
GO:0007212 dopamine receptor signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004952 dopamine neurotransmitter receptor activity molecular_function

KEGG:

id description
K05840 DRD5; dopamine receptor D5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568635.2 True 2065 mRNA 0.44 1 47374636 47376700

Neighbor

gene id symbol gene type direction distance location
otop1 LOC106565199 coding upstream 2055 47365071 ~ 47372581 (+)
LOC110493987 LOC106565200 coding upstream 12850 47352232 ~ 47361786 (+)
lyar lyar coding upstream 33405 47328302 ~ 47341231 (+)
LOC110493983 LOC106565202 coding upstream 66447 47286927 ~ 47308189 (+)
LOC110493981 cytl1 coding upstream 237766 47135164 ~ 47136870 (+)
idh3b LOC106565197 coding downstream 351724 47728424 ~ 47743582 (+)
LOC110493993 LOC106565195 coding downstream 367656 47744356 ~ 47790013 (+)
LOC100135862 LOC106565314 coding downstream 428812 47805358 ~ 47807518 (+)
LOC100136222 LOC100136222 coding downstream 438191 47814891 ~ 47818587 (+)
LOC118940470 NA coding downstream 452015 47828715 ~ 47833280 (+)
G1456668 NA non-coding upstream 1823 47372689 ~ 47372813 (+)
G1456597 NA non-coding upstream 127484 47246876 ~ 47247152 (+)
G1456539 NA non-coding upstream 175051 47199377 ~ 47199585 (+)
G1456293 NA non-coding upstream 275471 47098965 ~ 47099165 (+)
G1456670 NA non-coding downstream 82 47376782 ~ 47378517 (+)
G1456699 NA non-coding downstream 37912 47414612 ~ 47415612 (+)
G1456708 NA non-coding downstream 49555 47426255 ~ 47478036 (+)
G1456818 NA non-coding downstream 197632 47574332 ~ 47610240 (+)
G1456912 NA non-coding downstream 322339 47699039 ~ 47699475 (+)
G1456570 NA other upstream 145840 47228219 ~ 47228796 (+)
G1454824 NA other upstream 1516135 45856249 ~ 45858501 (+)
G1454127 NA other upstream 2038113 45335294 ~ 45336523 (+)
G1454049 NA other upstream 2115065 45258475 ~ 45259571 (+)
G1453914 NA other upstream 2303711 45069971 ~ 45070925 (+)
G1456969 NA other downstream 456880 47833580 ~ 47839370 (+)
glrx LOC106565191 other downstream 654214 48030892 ~ 48036585 (+)
LOC110494013 LOC106565177 other downstream 1012382 48389082 ~ 48424478 (+)
bsnb LOC106565168 other downstream 1316621 48693321 ~ 48814670 (+)

Expression


Co-expression Network