Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118940150 |
| gene name | LOC106565146 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 50071168 ~ 50095171 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110493197 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036948416.1 | False | 576 | mRNA | 0.49 | 7 | 50071168 | 50094146 |
| TU1669655 | True | 306 | lncRNA | 0.47 | 2 | 50094002 | 50095171 |
50,064,000
50,068,000
50,072,000
50,076,000
50,080,000
50,084,000
50,088,000
50,088,000
50,092,000
50,096,000
50,100,000
50,104,000
50,108,000
50,112,000
NC_048581.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940048 | NA | coding | downstream | 14397 | 50056051 ~ 50056771 (-) |
| LOC110494994 | LOC106565145 | coding | downstream | 21668 | 50048874 ~ 50049500 (-) |
| LOC118936468 | LOC106565147 | coding | downstream | 35651 | 50028099 ~ 50035517 (-) |
| LOC118940149 | LOC106565147 | coding | downstream | 75486 | 49990894 ~ 49995682 (-) |
| LOC118940148 | LOC106565145 | coding | downstream | 80266 | 49982352 ~ 50026869 (-) |
| LOC118940044 | NA | coding | upstream | 15321 | 50109467 ~ 50111744 (-) |
| LOC110494995 | NA | coding | upstream | 17779 | 50111925 ~ 50112871 (-) |
| LOC110494965 | LOC106565146 | coding | upstream | 22096 | 50116242 ~ 50127658 (-) |
| tmcc1b | LOC106565144 | coding | upstream | 40632 | 50134778 ~ 50154691 (-) |
| LOC118940040 | LOC106565143 | coding | upstream | 72650 | 50166796 ~ 50173259 (-) |
| G1459398 | NA | non-coding | downstream | 29681 | 49978291 ~ 50041487 (-) |
| G1459318 | NA | non-coding | downstream | 56165 | 50013729 ~ 50015003 (-) |
| G1459320 | NA | non-coding | downstream | 90545 | 49903921 ~ 49980623 (-) |
| LOC118940041 | LOC106565146 | non-coding | downstream | 174970 | 49881133 ~ 49896198 (-) |
| G1459432 | NA | non-coding | upstream | 34946 | 50129092 ~ 50129321 (-) |
| G1459830 | NA | non-coding | upstream | 61422 | 50155568 ~ 50155780 (-) |
| G1459833 | NA | non-coding | upstream | 67175 | 50161321 ~ 50161599 (-) |
| G1459850 | NA | non-coding | upstream | 78973 | 50173119 ~ 50173997 (-) |
| LOC118940151 | NA | non-coding | upstream | 82124 | 50173658 ~ 50178053 (-) |
| G1459325 | LOC106565145 | other | downstream | 35656 | 49991563 ~ 50035512 (-) |
| LOC110494969 | LOC106584726 | other | downstream | 112905 | 49953456 ~ 49964331 (-) |
| G1459333 | LOC106584726 | other | downstream | 305099 | 49727352 ~ 49766069 (-) |
| G1459296 | NA | other | downstream | 409247 | 49661551 ~ 49661921 (-) |
| G1458499 | NA | other | downstream | 1205803 | 48864504 ~ 48865365 (-) |
| slc25a34 | LOC106565132 | other | upstream | 255673 | 50349819 ~ 50363084 (-) |
| G1460128 | NA | other | upstream | 660788 | 50754934 ~ 50760996 (-) |
| LOC110494046 | LOC106565111 | other | upstream | 773081 | 50862652 ~ 50875481 (-) |
| G1460539 | NA | other | upstream | 904608 | 50998754 ~ 50999404 (-) |
| G1459374 | NA | non-coding | downstream | 83369 | 49832893 ~ 50010633 (-) |
