LOC110494995


Basic Information

Item Value
gene id LOC110494995
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50111925 ~ 50112871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469369.2
CAGGTCCTAGATCTACTTTGCCTCCCAGCACGACAGTGAGTCCTACAGAAGTTTCGACTGTTACTTCTACTTCGACCCGAGACACCACAGTGAGACCAACTACCAGTTTGACCTCTCCTTTGACCCCCAGCACGGCAGTGAATCCTACATCAGGTGTGTTGGTCATCTTTATCATGAAGAAGGCATGACAATGCCTATCCCCTCTCAGGAGaccgaaaagatttggcatgggtcctcagatcctcaaaaagttatacagctgcaccatagagagcaAGGCTTAGTTTGGCAACTTCTCGGCATCCGACCGCAGAGgttagtgtgtacggcccagtacatctctTGGGACAAgattcctgacatccaggacatctatatcaggcggggtcagaggaaggccctttaaaattgtcaaagactccagccacccaagtcatgaactgttctctctgctactgcatggcaagtggtaTTGGATTGCCAAGTCCAGGTccaaaagactccttaacagcttctacccccaagctataagactgctgaagagTTAATGAAATGGCTAACCAGACTAtatgcattgacccccttttttattctgctgctactctttat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469369.2 True 609 mRNA 0.48 3 50111925 50112871
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118940044 NA coding downstream 181 50109467 ~ 50111744 (-)
LOC118940150 LOC106565146 coding downstream 17779 50071168 ~ 50095171 (-)
LOC118940048 NA coding downstream 55154 50056051 ~ 50056771 (-)
LOC110494994 LOC106565145 coding downstream 62425 50048874 ~ 50049500 (-)
LOC118936468 LOC106565147 coding downstream 76408 50028099 ~ 50035517 (-)
LOC110494965 LOC106565146 coding upstream 3371 50116242 ~ 50127658 (-)
tmcc1b LOC106565144 coding upstream 21907 50134778 ~ 50154691 (-)
LOC118940040 LOC106565143 coding upstream 53925 50166796 ~ 50173259 (-)
LOC118940151 NA coding upstream 60787 50173658 ~ 50178053 (-)
LOC110494990 NA coding upstream 79723 50190302 ~ 50196356 (-)
G1459398 NA non-coding downstream 70438 49978291 ~ 50041487 (-)
LOC118940148 LOC106565145 non-coding downstream 85056 49982352 ~ 50026869 (-)
G1459318 NA non-coding downstream 96922 50013729 ~ 50015003 (-)
G1459320 NA non-coding downstream 131302 49903921 ~ 49980623 (-)
G1459432 NA non-coding upstream 16221 50129092 ~ 50129321 (-)
G1459830 NA non-coding upstream 42697 50155568 ~ 50155780 (-)
G1459833 NA non-coding upstream 48450 50161321 ~ 50161599 (-)
G1459850 NA non-coding upstream 60248 50173119 ~ 50173997 (-)
G1459325 LOC106565145 other downstream 76413 49991563 ~ 50035512 (-)
LOC110494969 LOC106584726 other downstream 153662 49953456 ~ 49964331 (-)
G1459333 LOC106584726 other downstream 345856 49727352 ~ 49766069 (-)
G1459296 NA other downstream 450004 49661551 ~ 49661921 (-)
G1458499 NA other downstream 1246560 48864504 ~ 48865365 (-)
slc25a34 LOC106565132 other upstream 236948 50349819 ~ 50363084 (-)
G1460128 NA other upstream 642063 50754934 ~ 50760996 (-)
LOC110494046 LOC106565111 other upstream 754356 50862652 ~ 50875481 (-)
G1460539 NA other upstream 885883 50998754 ~ 50999404 (-)

Expression

LOC110494995 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
End of interactive chart.

LOC110494995 Expression in each Bioproject

Bar chart with 15 bars.
LOC110494995 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network