zbtb40 (zbtb40)


Basic Information

Item Value
gene id zbtb40
gene name zbtb40
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50445805 ~ 50455730 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948185.1
TTTCGGTGACCTAATTCCACTGTCCTCAAAGCTAGCTTTTGATGCTAGCAAGGCTAGGTTCAGGTTGTAGCATGGTCTACATCAGAGTAAAAAACAAATGTTGGTgagctaatgttagttagctacttTTCTGTTTTTCTGCAATATTTTCACATCAGAGTACTCTGAACGAGTAGGTAGACTGGTTGTGATGGAGCTGCCCAACTACAGCAGGCAGCTGATGCAGCAGCTCCGCGCCCTGAGGAAGGAGAGTCAGTTCTGTGACTGCTCTATTCTGGTGGGGGACACACCCCATCGTGCCCACAAACTGGTGCTGGCTGCCTCCAGTCTGCTCTTTAGGTCTCTGCTGGAGGGCTCGGAAAGCATCTCCATCGACACGGCTGTGGTGTCATCCCAGGAGTTCTCCTGCCTGCTGGACATGGTGTACACCGGAAAGCTGCCCCCAGGGAAACACAACTTCACCCGCATCATTGCCGCCGCAGACAGCCTGCAGATGTTTGACGTAGCTGTGGGCTGCAAGAACATTCTCACCAACCTGATGAATCAGTCGAcgaccaccacacacactacacaaccaGCCTCACCTACCCCACCACCCGCCATCACCACCCAACCACAGCTCCAGAGCCAGGAGGCCGAGCACACAGCTTCCCCAGAGACAGCTGTACCTAGCATGGGAGAGGATGGTATGAAGATTGGCCCCTCTGGAGCCCAGGGGAAGGAAAAGGTGGAAGAGGCAGGTTTGGAGAGTGAAGTGACCACAGCAGCCACACGGAGCGAGCCAGTCAatgtgaaagaggagaggaaagagaaggatgGGCCACCATCTAAAAGAGCTCGCCTTCAACTTCCAGAGAGCACAGCTGACGTGGACCCCCTGTCCCAGGGAGGAGTCAAGATGGATACAGAGGTGGTGGATGTGCGGCAGTGGCTCAGAGCACTGCAGACCTGGGACGGCATCTCCACtgaggagagacagGTGATACTGTCCTGCAGTGAGGGGGATCCAGGGGGTCCTGCTGTGTTTCAGAGGCTCCAGAGCAGAGTGAAGGAGCAGAGGAGTCTCTCAGCCCAGACACTACTCACACTGATGGGTCTGCTTAAGGAGTTTCACCCCAATCTGGCAACCCAGCTGCATGAGCACACTCAGCAAGGAGAGGACACCAGCCAGGGAGCTACAGGCTCCGAGGCTGAAGAGCCGGAGGAGCAGCCCCAGTCGCCCACTACTGCAGACGCAGACACCGtcgaggaggaagaagaagaggagattGAAGAGGACGGTGAGAaagaaggagaaggggagaggaagactAGATCCAGGGCTAAGCGCTCCTCCCCCTCTCGTCCGTACTTGTGTCGCTGGTGCAGTAAGGCCTTTGGTTTTAAGTGTCGTATGGTGGCCCACACCAAGCGCTGCACCATGTCCAAGGAAGCTAGGCTGCAGTGCCCTGAGTGCCCAGAGGAGCTGCCCACATCGCGGGCACTACAGCTCCACCGCAACAAGGCCCACCCAGAGTCCAAAGCCGCCAAAAAGAAACGGCCGCAGGTGTCCTGTGATATGTGTGGCAGGACCTTCGCTCACCCCTCAGGTATGCTGTACCACAAACGCACAGAGCACTTTGAGGAGAAGCCGTTTGCGTGTGAGGAGTGCGGGGCCAAGTTTGGGGCAAACTCTTCTCTGAAGAACCACATGCGActgcacactggagagaagccttaccactgcaaAAACTGTGACATGAGCTTTAGTGTGGCTGCCGCTCTGGCCTACCACACCAAGAAGAAACACTCCgaggGTAAAATGTATTCATGTCAGTACTGCGAGGCTCTGTTTGCCCAGTCCATTGAGCTGACTCgtcacgtgcgcacacacaccgGAGACAAGCCCTACGTATGCAGGGAGTGTGGCAAAGGCTTCAGCCAGGCCAACGGGCTCTCTGCTCACCTACAGACCTCTCACAACATCTCTGAGCCTCATGACTGTCAGAAGTGTCGTCTCAGTTTTTCCACACTGGAGGACCACAGGAAGCACATCCAGGAGTGTCACCCGAAGGAGTACCACCGGTGTCCTGAGTGCAACAAGATGTTCACCAACCCCTCCCTGCTGGAGAAACACATAGCCGTCCACGCTGGGGGCAAGCCATTCAGCTGCAAGCTCTGCCAGAAGTCCTACCAGCAAATGTCGGGACTGTGGTATCATAACCGTACCAACCACCCGGAAGTGTTTGCTGGTCAGACCCACCGGCAGCTCAAGTCTCTGCTGCAGTGCAGCGTGTGCTGCAAGTTCCTCCACAGTGCCAGTAGCCTGGCTAAGCACCAGAAGACAGAGCACACAGGCATGTTTGATACTGACGGGCTTCTGGTGGGGAATCCGGACCTGCAATCAGACTCGTCAGCGGTGAAGTGCCTGTACTGTCCTGGCCTGTTCCCCAGCGAGGCTGAGATGCAGGAGCACGCCAGCACTGAGCATTTCAGCCAAGAGGGGGCAGCGTTCGGCTGTTCTCTCTGCCCGCTGGTCTGCCCCTCCCAGCTTCAGCTCCAGGAGCACTTCCTTTCCTGCCACATAGGGACAATAGAGGAGCAGGAGCAGGCCTCCACCTCTCAGATGGTGATTGAGACAGAGGAGGACCCCGCTGGCGTGGCGGGACAAGTGATATCTGTGGACCAATCCCAGCAGGTGTATGTTGCCCTGGGAGACGCGGAGGATGGTCACTCCAGCACTGAGGTGATGGCGGTCAGCATGGAGGATTTGTTGAATGGAACTGTCACTTTCATTTGTGGGGAGGGCCAGTGACCCCTAACCTCTAGTTTCTACTTCCTGGTGAAGTATGAACTGTCCTAGCAACATTGGGCAGCTTGGAATGAATAAAACTAACTTATGCTACACCAAGGGACACTG
>XM_021570298.2
CTCCTATTTTCTCTATACATACTTGCGAGCAATCGCCATTTCAAAATACCGAAGCTTTATTGCGCTGTTTAGTTTGTTCATCGACGGAGTTTAAATAAAGAGCCGGATTATTTGAATAACAGTCAAGGTAGACTGGTTGTGATGGAGCTGCCCAACTACAGCAGGCAGCTGATGCAGCAGCTCCGCGCCCTGAGGAAGGAGAGTCAGTTCTGTGACTGCTCTATTCTGGTGGGGGACACACCCCATCGTGCCCACAAACTGGTGCTGGCTGCCTCCAGTCTGCTCTTTAGGTCTCTGCTGGAGGGCTCGGAAAGCATCTCCATCGACACGGCTGTGGTGTCATCCCAGGAGTTCTCCTGCCTGCTGGACATGGTGTACACCGGAAAGCTGCCCCCAGGGAAACACAACTTCACCCGCATCATTGCCGCCGCAGACAGCCTGCAGATGTTTGACGTAGCTGTGGGCTGCAAGAACATTCTCACCAACCTGATGAATCAGTCGAcgaccaccacacacactacacaaccaGCCTCACCTACCCCACCACCCGCCATCACCACCCAACCACAGCTCCAGAGCCAGGAGGCCGAGCACACAGCTTCCCCAGAGACAGCTGTACCTAGCATGGGAGAGGATGGTATGAAGATTGGCCCCTCTGGAGCCCAGGGGAAGGAAAAGGTGGAAGAGGCAGGTTTGGAGAGTGAAGTGACCACAGCAGCCACACGGAGCGAGCCAGTCAatgtgaaagaggagaggaaagagaaggatgGGCCACCATCTAAAAGAGCTCGCCTTCAACTTCCAGAGAGCACAGCTGACGTGGACCCCCTGTCCCAGGGAGGAGTCAAGATGGATACAGAGGTGGTGGATGTGCGGCAGTGGCTCAGAGCACTGCAGACCTGGGACGGCATCTCCACtgaggagagacagGTGATACTGTCCTGCAGTGAGGGGGATCCAGGGGGTCCTGCTGTGTTTCAGAGGCTCCAGAGCAGAGTGAAGGAGCAGAGGAGTCTCTCAGCCCAGACACTACTCACACTGATGGGTCTGCTTAAGGAGTTTCACCCCAATCTGGCAACCCAGCTGCATGAGCACACTCAGCAAGGAGAGGACACCAGCCAGGGAGCTACAGGCTCCGAGGCTGAAGAGCCGGAGGAGCAGCCCCAGTCGCCCACTACTGCAGACGCAGACACCGtcgaggaggaagaagaagaggagattGAAGAGGACGGTGAGAaagaaggagaaggggagaggaagactAGATCCAGGGCTAAGCGCTCCTCCCCCTCTCGTCCGTACTTGTGTCGCTGGTGCAGTAAGGCCTTTGGTTTTAAGTGTCGTATGGTGGCCCACACCAAGCGCTGCACCATGTCCAAGGAAGCTAGGCTGCAGTGCCCTGAGTGCCCAGAGGAGCTGCCCACATCGCGGGCACTACAGCTCCACCGCAACAAGGCCCACCCAGAGTCCAAAGCCGCCAAAAAGAAACGGCCGCAGGTGTCCTGTGATATGTGTGGCAGGACCTTCGCTCACCCCTCAGGTATGCTGTACCACAAACGCACAGAGCACTTTGAGGAGAAGCCGTTTGCGTGTGAGGAGTGCGGGGCCAAGTTTGGGGCAAACTCTTCTCTGAAGAACCACATGCGActgcacactggagagaagccttaccactgcaaAAACTGTGACATGAGCTTTAGTGTGGCTGCCGCTCTGGCCTACCACACCAAGAAGAAACACTCCgaggGTAAAATGTATTCATGTCAGTACTGCGAGGCTCTGTTTGCCCAGTCCATTGAGCTGACTCgtcacgtgcgcacacacaccgGAGACAAGCCCTACGTATGCAGGGAGTGTGGCAAAGGCTTCAGCCAGGCCAACGGGCTCTCTGCTCACCTACAGACCTCTCACAACATCTCTGAGCCTCATGACTGTCAGAAGTGTCGTCTCAGTTTTTCCACACTGGAGGACCACAGGAAGCACATCCAGGAGTGTCACCCGAAGGAGTACCACCGGTGTCCTGAGTGCAACAAGATGTTCACCAACCCCTCCCTGCTGGAGAAACACATAGCCGTCCACGCTGGGGGCAAGCCATTCAGCTGCAAGCTCTGCCAGAAGTCCTACCAGCAAATGTCGGGACTGTGGTATCATAACCGTACCAACCACCCGGAAGTGTTTGCTGGTCAGACCCACCGGCAGCTCAAGTCTCTGCTGCAGTGCAGCGTGTGCTGCAAGTTCCTCCACAGTGCCAGTAGCCTGGCTAAGCACCAGAAGACAGAGCACACAGGCATGTTTGATACTGACGGGCTTCTGGTGGGGAATCCGGACCTGCAATCAGACTCGTCAGCGGTGAAGTGCCTGTACTGTCCTGGCCTGTTCCCCAGCGAGGCTGAGATGCAGGAGCACGCCAGCACTGAGCATTTCAGCCAAGAGGGGGCAGCGTTCGGCTGTTCTCTCTGCCCGCTGGTCTGCCCCTCCCAGCTTCAGCTCCAGGAGCACTTCCTTTCCTGCCACATAGGGACAATAGAGGAGCAGGAGCAGGCCTCCACCTCTCAGATGGTGATTGAGACAGAGGAGGACCCCGCTGGCGTGGCGGGACAAGTGATATCTGTGGACCAATCCCAGCAGGTGTATGTTGCCCTGGGAGACGCGGAGGATGGTCACTCCAGCACTGAGGTGATGGCGGTCAGCATGGAGGATTTGTTGAATGGAACTGTCACTTTCATTTGTGGGGAGGGCCAGTGACCCCTAACCTCTAGTTTCTACTTCCTGGTGAAGTATGAACTGTCCTAGCAACATTGGGCAGCTTGGAATGAATAAAACTAACTTATGCTACACCAAGGGACACTG

Function

symbol description
zbtb40 Predicted to enable metal ion binding activity. Orthologous to human ZBTB40 (zinc finger and BTB domain containing 40).

NR:

description
zinc finger and BTB domain-containing protein 40

GO: NA

KEGG:

id description
K10512 ZBTB40; zinc finger and BTB domain-containing protein 40

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948185.1 False 2899 mRNA 0.56 13 50445805 50455536
XM_021570298.2 True 2850 mRNA 0.56 13 50445805 50455730
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Neighbor

gene id symbol gene type direction distance location
fbxo42 LOC106565130 coding downstream 65400 50364407 ~ 50380405 (-)
slc25a34 LOC106565132 coding downstream 82721 50349819 ~ 50363084 (-)
fblim1 fbli1 coding downstream 99666 50336611 ~ 50346335 (-)
LOC110494951 LOC106565133 coding downstream 113408 50300923 ~ 50332397 (-)
ndufaf3 ndufaf3 coding downstream 182536 50260850 ~ 50263269 (-)
usp48 LOC106565123 coding upstream 3812 50459542 ~ 50483933 (-)
LOC110494987 LOC106565122 coding upstream 50915 50506645 ~ 50507861 (-)
LOC110493202 LOC106565118 coding upstream 88057 50543787 ~ 50556328 (-)
LOC110494979 LOC106565119 coding upstream 103542 50559272 ~ 50577517 (-)
LOC110494983 rl10a coding upstream 122285 50578015 ~ 50580624 (-)
G1459963 NA non-coding downstream 20402 50425170 ~ 50425403 (-)
G1459953 NA non-coding downstream 41354 50404180 ~ 50404451 (-)
G1459952 NA non-coding downstream 41766 50403543 ~ 50404039 (-)
G1459944 NA non-coding downstream 52979 50392600 ~ 50392826 (-)
G1459943 NA non-coding downstream 54018 50391365 ~ 50391787 (-)
G1459995 NA non-coding upstream 36182 50491912 ~ 50492210 (-)
G1460033 NA non-coding upstream 98341 50554071 ~ 50561164 (-)
G1460034 NA non-coding upstream 99301 50555031 ~ 50562145 (-)
G1460039 NA non-coding upstream 118865 50574595 ~ 50574882 (-)
G1460040 NA non-coding upstream 119196 50574926 ~ 50575127 (-)
LOC118940151 NA other downstream 271212 50173658 ~ 50178053 (-)
G1459325 LOC106565145 other downstream 410293 49991563 ~ 50035512 (-)
LOC110494969 LOC106584726 other downstream 487542 49953456 ~ 49964331 (-)
G1459333 LOC106584726 other downstream 679736 49727352 ~ 49766069 (-)
G1460128 NA other upstream 299204 50754934 ~ 50760996 (-)
LOC110494046 LOC106565111 other upstream 411497 50862652 ~ 50875481 (-)
G1460539 NA other upstream 543024 50998754 ~ 50999404 (-)
LOC110494054 LOC106565105 other upstream 607514 51063244 ~ 51077345 (-)
G1461521 NA other upstream 1291186 51746916 ~ 51761022 (-)

Expression

zbtb40(zbtb40) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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zbtb40(zbtb40) Expression in each Bioproject

Bar chart with 21 bars.
zbtb40(zbtb40) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network