Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110494054 |
| gene name | LOC106565105 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 51063244 ~ 51077345 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| parathyroid hormone-related protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568745.2 | False | 1326 | mRNA | 0.44 | 3 | 51063315 | 51073680 |
| XM_021568743.2 | False | 1393 | mRNA | 0.43 | 3 | 51063315 | 51077345 |
| XM_021568746.2 | False | 1390 | mRNA | 0.43 | 3 | 51063315 | 51077345 |
| TU1670991 | True | 1436 | TUCP | 0.42 | 3 | 51063244 | 51077317 |
51,048,000
51,050,000
51,052,000
51,054,000
51,056,000
51,058,000
51,060,000
51,062,000
51,064,000
51,066,000
51,068,000
51,070,000
51,072,000
51,074,000
51,076,000
51,078,000
51,080,000
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| elf3 | LOC106565106 | coding | downstream | 31728 | 51026318 ~ 51031587 (-) |
| LOC110494050 | LOC106565107 | coding | downstream | 104714 | 50953994 ~ 50958601 (-) |
| c17h6orf89 | LOC106565108 | coding | downstream | 122081 | 50930373 ~ 50941234 (-) |
| LOC110493205 | NA | coding | downstream | 135900 | 50914525 ~ 50927415 (-) |
| LOC110494046 | LOC106565111 | coding | downstream | 187834 | 50862652 ~ 50875481 (-) |
| LOC110493206 | LOC106565103 | coding | upstream | 2769 | 51080114 ~ 51242872 (-) |
| optc | LOC106565102 | coding | upstream | 360054 | 51437399 ~ 51467300 (-) |
| LOC110494056 | got1a | coding | upstream | 586272 | 51663617 ~ 51667001 (-) |
| LOC110493208 | LOC106565100 | coding | upstream | 626692 | 51704037 ~ 51872774 (-) |
| LOC110494057 | LOC106565097 | coding | upstream | 796955 | 51874300 ~ 51882293 (-) |
| G1460560 | LOC100196684 | non-coding | downstream | 543 | 51057898 ~ 51062772 (-) |
| G1460518 | NA | non-coding | downstream | 102866 | 50960321 ~ 50960449 (-) |
| G1460513 | NA | non-coding | downstream | 116636 | 50946195 ~ 50946679 (-) |
| G1460512 | NA | non-coding | downstream | 117577 | 50945491 ~ 50945738 (-) |
| G1460511 | NA | non-coding | downstream | 119187 | 50943919 ~ 50944128 (-) |
| G1460606 | NA | non-coding | upstream | 60338 | 51137683 ~ 51138368 (-) |
| G1460649 | NA | non-coding | upstream | 136127 | 51213472 ~ 51215410 (-) |
| G1460704 | NA | non-coding | upstream | 231389 | 51308734 ~ 51308968 (-) |
| G1460708 | NA | non-coding | upstream | 236167 | 51313512 ~ 51313856 (-) |
| G1460539 | NA | other | downstream | 63911 | 50998754 ~ 50999404 (-) |
| G1460128 | NA | other | downstream | 302319 | 50754934 ~ 50760996 (-) |
| slc25a34 | LOC106565132 | other | downstream | 708565 | 50349819 ~ 50363084 (-) |
| LOC118940151 | NA | other | downstream | 888722 | 50173658 ~ 50178053 (-) |
| G1461521 | NA | other | upstream | 669571 | 51746916 ~ 51761022 (-) |
| G1462356 | NA | other | upstream | 1626788 | 52704133 ~ 52704688 (-) |
| G1463760 | NA | other | upstream | 2701137 | 53778482 ~ 53780496 (-) |
| G1464551 | NA | other | upstream | 3385326 | 54462671 ~ 54463702 (-) |
| G1464933 | NA | other | upstream | 3594907 | 54672252 ~ 54673919 (-) |
