LOC110494073 (LOC106583524)


Basic Information

Item Value
gene id LOC110494073
gene name LOC106583524
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 52639622 ~ 52699632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568769.2
GACCTGATGAACTCGCATACAGAGAAGGATATCTCtatcgctcgctcgctctctctctctctctctctctctctttctctctctttctctcgctctgccaTTGAAGGCATTTAATTGGAAATACATGAAGCAAGAATGTAATAATCGCATTATTAAATGGCACGTGATGTTTAAATTGACTAATGAGAATTAACTCAAACGTTCCGAACTGTCCATTCTGGTTTTGAAGAGCGCTTGCAGATCGAGACATTTTACATAACTTCATACTTGGCTATCTACTCTGGTCAGTGTGTCCGTTTAAAGTCATAATAGCCAACTATATCCTACACTCAGCGCCTTGGAATTTCGAGCACAACTATGTGGTCAAGAATGTCGAGGAATTACCCACTCCTGCCAATCTGATCTAGATTTCAGAACCAAGGACAGTTCACACCTGCTCCACCTGGGATACCGACGCGCGACGTTTCCTCACTTCCCGACTTTAACAATGCAACCAGTGAATAACCAAGATGACATGAGTGCCAAGAGTAGGCTCTAGAGTGATCCACCTCACCCAGCCTCAGCCCCTGTAAGACCATTCTGTGTCTCACTCCTACACCCACTTACCCACGACCCACTACACTGACCCCAGCTAGACTACCTCACCATGCCCACCACCGGCCTCCTCTGCCCTGGGCTCTGGGCCAAGGCTGCCCTTTGGTGGTCCCTTCACCTGCTCCTCTTTGACCTGCTCATCTCTGAGGCCCTGGCCAGCCCTAACAACAGATTCCCCCCTTCCACCAAGAGGGAGATCACCATCGACGGGGACCTGGTGATCGGCGGACTGTTCCCGGTGCACGAGAAGGGTGAGGGGGTGGAGGACTGTGGGAAGATCAACGAGCAACGAGGGATCCAGAGACTGGAGGCGATGCTTTTAGCGCTGGACGAGATCAACGCAGACGAGAGGCTGCTGCCAGGCCTCAGGCTGGGAGCCCACATCCTGGACACCTGCTCTAAGGACACCTACGCTCTGGAGCAGAGCCTGGAGTTTGTACGAGCCTCCCTCACTAAGGTGCACGAGCCTGGGTTCATCTGTCCAGACGGATCCAACCCCATCCAGGATGATGTCCCTCTGGCCATTTCTGGAGTCATCGGGGGCTCCTACAGTGACGTTTCCATCCAGGTGGCCAACCTCCTGCGCCTCTTCCAGATCCCTCAGATTAGCTACGCCTCCACCAGCGCCAAGCTCAGTGACAAGTCTCGCTATGACTACTTCGCCCGCACCGTGCCGCCAGACTTCTACCAGGCCAAGGCCATCGCCGAGATCCTGCGTTACTTCAACTGGACCTACGTGTCCACCGTGGCATCCGAGGGCGATTACGGTGAGACAGGCATCGATGCCTTCCAGCAGGAGGCCCGCGCCCGCCAGATCTGCATTGCCACCTCGGCCAAGGTGAGCCGCTCGATGAACCGCTACAGCTTCGACCAGGTGATCCGCTCGCTGCAGCAGAAGTCCAATGCCAAGGTGGTCATTCTGTTCACACGCAGTGAGGATGCCAGGGAGCTGCTAGTGGCTGCCGCCCGCATGAACGTCACCTTCATCTGGGTGGCCAGCGATGGCTGGGGGGCGCAGGAGAGTGTTGTGAGGGGAAGTGAGACAGCAGCCGACGGGGCCTTCACCATCGAGCTGGCCTCCTACCCCATCCGGGAGTTTGCCGACTACTTCACCAAGCTGAACCCCTACACTAACACACGGAACCCCTGGTTTAGAGAATTCTGGGAGCACCGCTTCGACTGTAGTCTTACAGAGCCTGGTTGTAGCGAACACAGTCTGCGGGACGGCAAGTTTGAGCAGGAGTCCAAGATCATGTTTGTAGTGAACGCAGTGTATGCTATGGCTCATGCTCTACATAATATGAGGCAGGCAGTTTGCCCACTCAATGCAACCAAGATCTGTGATGCCATGAAGCCAGGCACCGGGAAGAGGTTCTATAGGGATTTCATCCTCAAGGCCAAGTTCGATGCTCCCTTCAGACCTGCCGACACGGAGAACATTGTGCGTTTTGACGCCTACGGGGACAGTCTGGGCCGCTACAACATCTTCCACTATCACAAACAGGATGATAAATACGTGTATAGGAAGGTGGGTTACTGGGCCCAGGGCCTGATCCTGAATACCAGCCAGGTGCCATGGAGGGGCCCAGCCGGAGTGCCCCCCACCTCCCAGTGCAGTGATCCTTGCAGGAAGAACGAGGTGAAGAGCATGcagcctggagatgtgtgctGCTGGATCTGCATCCCCTGCCAGCCCTACCAGTACCTGCTGGATGAGTTCACCTGTGCAGACTGCAGCTTCGGACAGTGGCCCCAGGCCAACCTGACAGGCTGCTTCGACCTCCCAGAGGAGTACATCCACTGGGAGGATGCCTGGGCCATTGGGCCCGTCACAATCTCCTGCCTGGGCATGTTGTGTACCCTTTCCGTGGTGGGCCTGTTCTTCAAGAACAATGACACCCCTGTGGTCAAAGCCAGCGGCCGGGAGCTGTCCTATATCCTCCTACTCGGAGTCCTAATGTGCTACAGCATGACCTTCATCTACATCGCCAAGCCCTCGATGGCCGTGTGTACCCTACGTCGACTAGGCCTGGGAACCTCCTTCGCTGTGTGCTACTCGGCACTGCTCACTAAGACCAACCGTATCGCGAGGATCTTCAGCGGGGTGAAGGACGGGGCCACGCGGCCACGGTTCATCAGCCCAGCCTCCCAGGTGGCCATCTGCGGCGGACTTATCTCCTGTCAGCTCCTGGTGGCTGTGGTCTGGCTTCTGGTGGAGATGCCTGGTGTCAGGAAGGAGGTGAGCCCCGAAAGGAGGGATATAGTCACCCTGAAGTGCAACAGCAAGGACTCCAGCATGCTAGCCGCTCTGGCCTACAACTGCGTCCTAATCGTCCTCTGCACAGTCTACGCCTTTAAGACCAGGAAGTGTCCAGAGAACTTTAACGAGGCCAAGTTCATTGGGTTCACCATGTACACCACCTGTATCATCTGGCTGGCCTTCCAACCCATCTTCTACGTCACAGCCAGCGACTACAGGGTTCAGACCACCACCATGTGTATCTCTGTCAGTCTGAGTGGCTCTGTGGTGCTAGGCTGTCTCTTCGCTCCTAAGGTCCACATCATCCTATTCCAGCCCCAGAAGAATGTGACCACACTAAGGGTGCCTGCCAACCGCTTCGGGGCCACGGTCACAACATCAGCCTCAGTCCCCAGCTCGTCGAAAGCGGTAACAACGGTGTGTAACGGTCGTGAGGTGGTGGACTCCACTACGTCCTCTTTGTGAAGAAGGTTGAGCTGCTTGTATCATTCCTCCGTTCTCCAAACACAAGCTACAGTGCCATCTGAAATCACCCCCTCTCATCCAACAAAGCTGCTGATGACATAACGCTCATGCCATATCTCAAGTCCCATTTACAGTAGAGACAAGTAGAGGCTCTCTCTAGTCAGACAGAGGACTGTGAAAGCTAAATTATGACTATACATACCAGTATTACGTAATGTATGAGTGTAAATCCTTTTGGTATAGATTTAACAACATTGCATTGATTTTATTTGGTTTCAGGATAGACTTGTCGTTGAATGCGCTGCTGTATgaagggttgcaaagggagggtatattactgaaaACGTTTACCAGTAAACTAGCTGAATTTTGGTCATTTTCAGGTTTCTTTTGGAATCGAGTGGCCTTTTtagtacttcagattatcacaggtgtctgtaattatgaAATAATTCAATAAgttgattttaaaataaaaatacaaagaCAAGcagtaaaacattatcctaaatataaaccatcaacttagtgaacaccgttggtgtttaatatgatggtttcagcatgaaatatcctttatttatgttttacacaCTTATTTTACTCTTTCAATGTCtatgttgtaaatgttttggaatcaaactggtggcagttgtgaaataagtcaatagttggaagagttaATGAAAAcaattgttgattagatgctt

Function

NR:

description
metabotropic glutamate receptor 2-like

GO: NA

KEGG:

id description
K04605 GRM2; metabotropic glutamate receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568769.2 True 4029 mRNA 0.52 12 52639622 52699632

Neighbor

gene id symbol gene type direction distance location
LOC110494072 LOC106565326 coding upstream 140078 52493771 ~ 52499544 (+)
zgc:113307 LOC106565325 coding upstream 184759 52444715 ~ 52454863 (+)
LOC110494068 LOC106565087 coding upstream 237199 52398555 ~ 52402423 (+)
LOC100301636 LOC100301636 coding upstream 246484 52389226 ~ 52393138 (+)
LOC118936244 LOC100301636 coding upstream 258498 52377165 ~ 52381124 (+)
LOC110494075 LOC106565328 coding downstream 31766 52731398 ~ 52752182 (+)
LOC110494076 NA coding downstream 110526 52810158 ~ 52974852 (+)
cfap20dc cssa12h3orf67 coding downstream 768503 53468135 ~ 53522586 (+)
LOC110494082 fam3d coding downstream 826585 53526217 ~ 53530187 (+)
LOC110494083 LOC106565334 coding downstream 831624 53531256 ~ 53542954 (+)
G1462021 NA non-coding upstream 135748 52503175 ~ 52503874 (+)
G1461948 LOC106565086 non-coding upstream 216612 52422168 ~ 52423010 (+)
G1461938 NA non-coding upstream 224289 52415112 ~ 52415333 (+)
G1461440 NA non-coding upstream 234050 52405341 ~ 52405572 (+)
G1461331 NA non-coding upstream 462664 52176739 ~ 52176958 (+)
G1462159 NA non-coding downstream 5691 52705323 ~ 52705583 (+)
G1462172 NA non-coding downstream 22648 52722280 ~ 52722667 (+)
G1462399 NA non-coding downstream 80776 52780408 ~ 52780630 (+)
G1462526 NA non-coding downstream 257385 52957017 ~ 52957711 (+)
G1462527 NA non-coding downstream 260672 52960304 ~ 52966563 (+)
G1460249 LOC106565103 other upstream 1548733 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 1742178 50894903 ~ 50897444 (+)
G1459769 NA other upstream 1862550 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 2203916 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 2455926 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 1474382 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 1556749 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 1772073 54471705 ~ 54474472 (+)
G1466124 NA other downstream 3297016 55996648 ~ 55998347 (+)
G1466131 NA other downstream 3315945 56015577 ~ 56016613 (+)

Expression


Co-expression Network