LOC110494082 (fam3d)



Basic Information


Item Value
gene id LOC110494082
gene name fam3d
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 53526217 ~ 53530187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021568791.2
GTACCTTACAGGAGTGTTGGCTTTTACTCTATACTATAGGCTACAGGATAATCCTGGTTCTCTATTGAGGTTGAACACTGCTGTAGGTTTTACAGGATGACGGTGGAAGTGGGGACTGTTGCTTGAGCTATACAGCATGACAGAGGAGAGTACTCCAGGCTGGCAGGAAATACTTCAGGAATCTCTTCTTCCAGTGTAAAGAACTGTCAAAATACCAAGGAATTGTCTTCTAATTGGCTGTTGAGATGAGACCAAGAGACGTTGTGTATGCTGTTACTTTCCTCATCGTCATCCTCGTTATGTGGGGAATCTATACCAACCCACCCTACATCCATCAGAGAGCAAGGGTTATACAACAACATATCTTTGGAGCTCAAAGAGCAACTGTGGTCACTGCTGCTGTGCCTGAAATCTCCCATCCAAAATGCAGCCTTTCCAAAAACTGCCCTATCGACCATTTTGCATTTCAAATCAAGAGTGGAGCAGCGACTGTTGTGGGCCCAAAGATCTGCTTTGATGGTAACATTGTTATGAGTGGTGTGATGAACAACGTGGGACCAGGCCTGAACCTAGTGCTGGTGAATGGTGAAAATGGGAAGATCGAAAAATTTGACTACTTTAACATGTACTCTGGAGAAACAAAGGCCATCTTGGACTTCTTAAAGACGATTAAACCCGGAATGATTGTTCTGGTGGCATCTTTTGATGATGCAGCGACAAAGATGACTGATGAAATCAGGAACATATTTGCGGGACTGGGAAGCAGCAGTATCAAGGATGTCAAATTCAGAGACAGCTGGGTCTTTGCTGGAGGCGCTGGGACAGAACAGAAAAGCCCCTTTGAGAAGCTGGCTGCCAATAGTCAGAAGACCAATATTTACGGAAACTGGCCAGAGGTGGTGGAAATAGCCGGCTGCTTCCCCAGGAAGATCTGACTAGACATCCCATACAGAGATCTCCGAGTATACTGATCTAGAATCATGTCCATCCTATCCATGTATTGTTATTCATTATTATGTCAAAGGCTAAACAGATCCTGAATCGGTACTCATACTATATGAGACGTTTTATAAGTACAGGCCTTGATAGACTTCCTATGAAAATGGTTCCGGACTGGCTTGATGATTGACAGATCAAACAAACCACTGTCAGGATCACTCAACTTTAAGGAACAACTTCTCTGTTAAGACTGGGCATTCATTGTGTGTTTTTTCATGTCAGATTATTATGGTTACATCATTTTTTGCAAAATAGAGGAGTTTCAAAGTATGTAAAACAATTAAAAAGAACATGTGTTTTTAAGAAATTTGAGAGTTGTTGTTTCAAATTAAATAATGAATCTTG

Function


symbol description
fam3d Involved in negative regulation of insulin secretion. Predicted to be located in extracellular region. Predicted to be integral component of membrane. Predicted to be active in extracellular space.

NR:

description
protein FAM3C-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021568791.2 True 1344 mRNA 0.42 9 53526217 53530187

Neighbor


gene id symbol gene type direction distance location
cfap20dc cssa12h3orf67 coding upstream 3631 53468135 ~ 53522586 (+)
LOC110494076 NA coding upstream 551365 52810158 ~ 52974852 (+)
LOC110494075 LOC106565328 coding upstream 774035 52731398 ~ 52752182 (+)
LOC110494073 LOC106583524 coding upstream 826585 52639622 ~ 52699632 (+)
LOC110494072 LOC106565326 coding upstream 1026673 52493771 ~ 52499544 (+)
LOC110494083 LOC106565334 coding downstream 1069 53531256 ~ 53542954 (+)
pb1 pb1 coding downstream 90562 53620749 ~ 53625211 (+)
LOC110494086 LOC106565337 coding downstream 140122 53670309 ~ 53678165 (+)
si:dkey-7k24.5 LOC106565339 coding downstream 155973 53686160 ~ 53696488 (+)
LOC110493210 LOC106565341 coding downstream 263831 53794018 ~ 53861136 (+)
G1462765 NA non-coding upstream 208565 53281814 ~ 53317652 (+)
G1462527 NA non-coding upstream 559654 52960304 ~ 52966563 (+)
G1462526 NA non-coding upstream 568506 52957017 ~ 52957711 (+)
G1462399 NA non-coding upstream 745587 52780408 ~ 52780630 (+)
G1462172 NA non-coding upstream 803550 52722280 ~ 52722667 (+)
G1462923 NA non-coding downstream 248 53530435 ~ 53530686 (+)
G1462930 NA non-coding downstream 13064 53543251 ~ 53545720 (+)
G1463860 NA non-coding downstream 339844 53870031 ~ 53870400 (+)
G1463864 NA non-coding downstream 342719 53872906 ~ 53873220 (+)
G1463865 NA non-coding downstream 343234 53873421 ~ 53873736 (+)
G1460249 LOC106565103 other upstream 2435328 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 2628773 50894903 ~ 50897444 (+)
G1459769 NA other upstream 2749145 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 3090511 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 3342521 50181045 ~ 50192699 (+)
G1464092 LOC106565344 other downstream 643827 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 726194 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 941518 54471705 ~ 54474472 (+)
G1466124 NA other downstream 2466461 55996648 ~ 55998347 (+)
G1466131 NA other downstream 2485390 56015577 ~ 56016613 (+)

Expression



Co-expression Network