Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110494100 |
| gene name | LOC106565348 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 54256327 ~ 54264616 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021568821.2 | False | 1107 | mRNA | 0.45 | 7 | 54256327 | 54264613 |
| TU1674872 | True | 2731 | TUCP | 0.44 | 6 | 54256381 | 54264616 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494095 | LOC106565345 | coding | upstream | 57423 | 54173121 ~ 54198904 (+) |
| LOC110494094 | LOC106565344 | coding | upstream | 91012 | 54124425 ~ 54165315 (+) |
| LOC110494093 | LOC106565344 | coding | upstream | 166247 | 54052983 ~ 54090080 (+) |
| LOC110493211 | LOC106565499 | coding | upstream | 212490 | 54029024 ~ 54043837 (+) |
| LOC110494090 | LOC106565498 | coding | upstream | 279215 | 53969497 ~ 53977112 (+) |
| LOC110494098 | rab37 | coding | downstream | 803 | 54265416 ~ 54276020 (+) |
| LOC110493213 | NA | coding | downstream | 37849 | 54302462 ~ 54316540 (+) |
| LOC110493214 | NA | coding | downstream | 53116 | 54317729 ~ 54318723 (+) |
| slc2a11a | gtr11 | coding | downstream | 86232 | 54350845 ~ 54361786 (+) |
| LOC110494103 | LOC106565350 | coding | downstream | 98573 | 54363186 ~ 54384146 (+) |
| G1464184 | NA | non-coding | upstream | 5049 | 54251040 ~ 54251278 (+) |
| G1464160 | NA | non-coding | upstream | 14022 | 54195807 ~ 54242305 (+) |
| G1464094 | NA | non-coding | upstream | 29477 | 54212866 ~ 54226850 (+) |
| G1464093 | NA | non-coding | upstream | 52870 | 54166231 ~ 54203457 (+) |
| G1464091 | NA | non-coding | upstream | 57459 | 54164484 ~ 54198868 (+) |
| G1464223 | NA | non-coding | downstream | 65645 | 54330258 ~ 54332025 (+) |
| G1464252 | NA | non-coding | downstream | 130705 | 54395318 ~ 54396302 (+) |
| G1464256 | NA | non-coding | downstream | 146627 | 54411240 ~ 54411465 (+) |
| G1464261 | LOC100196839 | non-coding | downstream | 153517 | 54418130 ~ 54418396 (+) |
| G1464264 | NA | non-coding | downstream | 154570 | 54419183 ~ 54419400 (+) |
| G1464092 | LOC106565344 | other | upstream | 66710 | 54147039 ~ 54189617 (+) |
| G1460249 | LOC106565103 | other | upstream | 3165438 | 51080132 ~ 51137770 (+) |
| LOC110494047 | btg2 | other | upstream | 3358883 | 50894903 ~ 50897444 (+) |
| G1459769 | NA | other | upstream | 3479255 | 50776529 ~ 50777072 (+) |
| atxn7l2a | LOC106565127 | other | upstream | 3820621 | 50427145 ~ 50437612 (+) |
| LOC110494110 | LOC106565356 | other | downstream | 207092 | 54471705 ~ 54474472 (+) |
| G1466124 | NA | other | downstream | 1732035 | 55996648 ~ 55998347 (+) |
| G1466131 | NA | other | downstream | 1750964 | 56015577 ~ 56016613 (+) |
| LOC110494143 | LOC106565389 | other | downstream | 1823565 | 56088149 ~ 56127481 (+) |
| G1466224 | gem | other | downstream | 1954629 | 56219242 ~ 56220946 (+) |
