LOC110494114 (LOC106565368)


Basic Information

Item Value
gene id LOC110494114
gene name LOC106565368
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 54792943 ~ 54805426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568861.2
CTTGGACTGACTGAAGGCCACCCAGCAAAGTATCGACATCTTACCAACTTGGTCCCAGCAACATCCTACGAACTTGGGCAAAAAAAAGAGAGGGTAATTATGAGCACGGACGCAGAGATGGCGGCATTTGGCCCGGCGGCCATCTACCTCCGAaagccggagagagagaggattgcagcCCAGGCCACTCCCTTTGATGCCAAAACAGCTTTCTTTGTGGTTGAGCCCAAAGAGATGTACCTCAAAGGAGTTCTCCAGAGTAGAGAGGGTGGAAAAGCCACTGTCAAAACACTGTGTAACAAAGTTCTCACTGTGAAGGAGGATGATATCCACCCCATGAACCCTCCAAAGTACGATAAAATTGAGGACATGGCCATGATGACCCACCTCAATGAGGCCACGGTGTTGTATAACCTCAAAGAGCGTTACGCAGCATGGATGATCTACACCTACTCTGGGCTGTTCTGCGTCACTGTGAACCCCTACAAGTGGCTCCCAGTGTACGACTCTGTAGTTGTGAATGCTTACAGAGGCAAAAAGAGAATTGAGGCCCCACCCCACATCTTCTCTATCTCTGATAATGCCTATCAGTTCATGCTCACTGaccatgagaaccaGTCAATTCTGATCACTGGAGAATCTGGTGCAGGAAAGActgtgaacaccaaacgtgtcaTCCAGTACTTTGCGACAATCGCAGTGGCTGGGGGAAAGAAGGAACAAACAGCGGCTGCTGCTTCTgggaaaataaagGGGTCGTTGGAGGATCAAATCATTGCAGCCAACCCCCTACTGGAGGCTTATGGTAATGCCAAGACCGTGAGAAATGACAACTCCTCACGCTTTGGTAAGTTCATCAGAATCCATTTTGGAACAACTGGAAAGTTGGCCTCTGCTGATATTGAAACATATCTGCTGGAGAAGTCTAGAGTGACATTCCAGCTGTCTGCTGAGAGAAGCTACCACATCTTCTATCAGCTCATGACTGGACACCAGCCACAATTGCTGGAGGCACTTCTGATCACCACCAACCCCTATGACTATCCCATAATCAGTCACGGTGAAATCGCTGTCAAGAGTATTGATGATACAGAAGAGTTCATCGCCACCGATACGGCCATTGACATTTTAGGCTTCACTGCTGAGGAGAAGATTGGCATCTACAAGCTGACTGGTTCTGTGATGCATCATGGGGCAATGAAGTTCAAGCAGAAGCAGCGTGAGGAGCAGGCTGAGCCTGATGGCACTGAGGAGGCTGATAAAATCTCCTACCTCATGGGCCTGAACTCCGCTGACTTGCTCAAAGCTCTGTGCTACCCCAGAGTGAAGGTCGGGAATGAGATGGTGACCAAGGGGCAGACTGTACCACAGGTGAACAATTCAACTATGGCCCTCTGTAAATCAGTCTATGAGAAAATGTTCTTGTGGATGGTCGTCCGTATCAATGAGATGTTAGACACAAAGCAGGCCAGACAATTCTTCATTGGTGTGCTGGACATCGCTGGATTTGAAATCTTTGATTACAACAGCTTGGAGCAactttgcatcaacttcaccaATGAGAAACTACAACAGTtcttcaaccaccacatgtttgTACTGGAGCAAGAGGAGTACAAGAAAGAGGGAATTGAATGGGAGTTCATTGACTTTGGGATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCAATGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCTTCAGACACTACCTTCAAGAGCAAGCTGTATGACCAGCATATTGGTAAAACCAAAGCGTTTGAGAAGCCTAAACCTGGGAAAGGCAAGGCTGAGGCCCACTTTGCCCTGGTGCACTATGCCGGTACTGTGGACTACAATGTCACAGGCTGGCTGGACAAGAACAAGGACCCCCTGAATGACTCCGTTGTGCAACTGTACCAGAAGTCCTCAGTCAAACTGTTGGCTATGCTGTATGTAGGAGCAGCAGCTTCACAAGCAGACGATGcagcaagaggaggaggaggcaagaAGAAGAAGGGTGGTTCCTTCCAGACTGTGTCTGCTCTGTTCAGGGAGAATTTGGGCAAGCTGATGACCAACTTGAGGAGTACCCATCCTCACTTTGTGCGCTGTTTGATTCCCAATGAATCAAAGACACCAGGTCTGATGGAGAACTTCCTGGTCATCCACCAGCTGAGGTGTAATGGTGTACTGGAAGGTATAAGAATCTGCAGAAAGGGCTTCCCCAGCAGAATCCAATATGGTGACTTTAAGCAGAGATACAAAGTATTGAATGCAAGTGTCATCCCTGATGGACAATTTATTGACAACAAGAAGGCTTCAGAGAAGCTCCTGGGATCAATAGATGTGGACAAGAGTCAGTACAAGTTTGGGCACACCAAGGTGTTCTTCAAAGCTGGTCTGTTGGGTACTCTGGAGGAGATGCGAGATGAGAAACTGGTTACTCTGGTGACCATGACTCAGGCCCTGTGCAGAGGTTACGTCATGAGGAAAGAGTTTGTCAAGATGATGGCGAGACGAGAAGCAATTTACTCCATCCAATACAACATCCGCTCATTTATGAACGTGAAACACTGGCCATGGATGAAGCTGTACTTCAAGATCAAGCCTCTTTTAAAATCAGCAGAAACTGAAAAAGAGATGGCTGCAATGAAGGAAAACTTTGAGAAAATGAAGGAGGATCTGGCCAAGGCGTTGGCCAAGATAAAAGGGCTTGAGGAGAAGATAGTTTCTCTGTTGCAGGAAAATAATGATCTGCAGCTACAGATAGCAGCGGAAGAGAATACTCTCTGTGATACTGAGGAAAGGTGTGAGGGACTCATCAAGAGTAAGATCCAGATGGAAGCCAAACTCAAAGAGACATTTGAGCggctggaggatgaggaggagctcAATGCTGAACTGACTGCCAAGAAAAGGAAACTGGAGGACGAGTGCTCTGAGCTAAAGAAAGACATTGATGACTTGGAGCTCACCTTGGCCAAAGTGGAAAAGGAGAAACATGCCACTGAAAATAAGGTTAAAAACCTGACAGAGGAGATGTCTTCTCAAGATGAGAGCCTTATCAAGTTGACGAAGGAGAAGAAAGCCCTCCAAGAGGCGCACCAGCAAGTCCTTGATGATCTCCAGGCAGAGGAAGACAAAGTCAACAATCTGACCAAAGCCAAGACCAAGCTTGAACAGCAAGTTGATGATTTGGAGGGTTCCCTTGAGCAAGAAAAGAAGGTCCGCATGGACCTTGAGAGAGCCAAGAGGAAGCTTGAAGGAGATCTGAAACTGGCCCTGGAGTCCTTGATGGACCTGGAGAATGACAAGCAGCAGTCTGATGAGAAGATCAAGAAGAAGGACTTTGAGACAAGCCAACTTCTCAGCAAAATTGAAGATGAACAGGCATTGGGTGCTCAGCTTCAGAAGAAAATCAAAGAACTCCAGGCCCGTATTGAAGAGCTGGAAGAGGAGATTGAGGCTGAACGTGCTGCACGGGCGAAGGTTGAGAAGCAGAGGTCTGATCTCTCCAGGGAACTTGAGGAGATCAGTGAAAGGCTTGAAGAAGCTGGAGGTGCAACATCTGTCCAGATTGAGATGAGCAAGAAGCGTGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCCACCCTGCAGCATGAGGCCACGGCTGCTGCACTCCGTAGGAAGCAGGCCGACACTGTGGCAGAACTGGGAGAACAAATAGACAACCTCCAGCGTGTCAAGCagaagctggagaaggagaagagtgAATTCAAAATGGAGAGTGATGACCTCTCCAGCAACATGGAAGCTATCGCCAAGGCAAAGGGTAATCTAGAGAAAATGTGCCGAAGCCTTGAGGATCAACTGAGTGAATTGAAGACAAAGAATGATGAGCATGTCCGCCAACTTAATGACATAAATGTTCAGAGAGCAAGGCTTCTGACTGAGAATGGTGAACTTGGTCGTCAGATGGAGGAGAAAGAATCTCTTGTTTCCCAGTTGACCAGGGCCAAGCAGACTTTCACACAGCAGATTGAGGATCTCAAAAGGCAGATTGAAGAGGAAGTGAAGGCCAAAAATGCCCTAGCCCATGGTCTGCAGTCAGCCCGCCATGACTGTGATCTGCTTCGGGAGCAGTATGAGGAAGAGCAGGAGGCCAAGGCTGAACTGCAGCGGGCATTGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGATCCAGATATGAAACTGATGCCATTCAGCGCACTGAGGAGCTTGAGGATGCCAAGAAAAAGCTTACCCAGCGCCTGCAAGATGCACAGGAGGCTGTTGAAGCAACAAACGCCAAGTGTGCTTCTCTGGAGAAGACCAAGCAGAGACTCCTGGGTGAAGTGGAGGATCTCATGATTGATGTGGAGCGAGCTAATGCTTCAGCTGCCCAGCTTGACAAGAAGCAGAGGAACTTTGACAAGGTTCTGACCGAGTGGAAGCAGAAGTATGAGGAGGGCCAGGCAGAGCTAGAGGGGTCTCTGAAAGAGGCCCGCTCTCTCAGCACCGAGCTGTTCAAGATGAAGAACTCCTATGAAGAATGTTTGGACCACCTGGAGACACTGAAGAGGGAGAACAAGAACCTGCAACATGAGATCTCTGACCTGACTGAACTGGTCAGTGAGTCTGGAAAGAGCATCCATGAGCTGGATAAGGCAAAGAAGACAGTAGAGAATGAGAAGGCAGAAATCCAGGCTGCGCTAGAGGAAGCAGAGGGCACACTGGAACATGAGGAATCCAAGATTCTTCGTATACAGCTAGAGCTCAACCAGATCAAAGGTGAAGTTGACAGGAGGCTGGCAGAGAAGGATGAGGAGACAGAGCAAATCAAAAGGAACAGCCAGAGGATGATGGACTCCATGCAGAGCACTCTGGACTCTGAGATCAGGAGCAGGAATGATGCCATGAGAGTcaagaagaagatggagggagacctCAATGAGATGGAGATTCAGCTGAGCCATGCCAACCGCCAGGCTGCTGAAGCCCAGAAACAGCTGAGGAACGTCCAGGGAGCACTCAAGGATGCCCAACTGCAACTTGATGACGCCATCCGCGTCGCAGATGACATGAAGGAGCAAGTAGCCATGGTGGAGCGCAGGAATAACCTGATGATGGCTGAAATTGAAGAACTGAGGGCTGCcctggagcagacagagagaggccgcAAAGTGGCCGAACAGGAGCTGGTTGATGCCAGTGAGCGTGTTGGACTGCTGCACTCTCAGAATACCAGCCTCATCAACACTAAGAAGAAGCTGGAGGTTGACCTTAATCAGGTCCAAGGTGAAATGGAAGACACTGTCCAGGAGGCAAGAAACGCAGAAGAGAAGGCCAAGAAGGCTATTACTGATGCTGCCATGATGGCagaggagctgaagaaggagcaggACACCAGCTCTCACCTGGAGAGGATGAAGAAAAACCTGGAGGTCACAGTGAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGAATCTGGCCATGAAGGGTGGAAAGAAGCAACTCCAGAAACTGGAGGCTAGGGTCCGTGACCTGGAGAGTGAAGTTGATGCTGAACAGAAACGTGGAGCTGAAGCTATTAAAGGTGTTCGTAAATATGAGAGGAGAGTCAAGGAGCtcacctaccagACCGAAGAGGACAATAAAAATGTGAGCAGGCTGCAAGATCTGGTGGACAGGCTTCAGTTAAAAATGAAGGCCTACAAGAGAGCGGCTGAGGATGCTGAGGAGCAATCCAACATTCACCTGTCCAGGTACAGGAAGGTGCAGCATGAGCTGGAGGAAGCTCAAGAGCGTGCCGACATCTCTGAGTCCCAGGTCAACAAGTTGAGAGCCAAGAGCCGTGAAATTGGTAGCAAGGGGAATGTGGCTGAAGAGTGAGGGACGAAGTCCAGATGAGACACATTATCAACAGGTCATACAATATGATTTTTGGTAAAAATGCTCATGAATCAAAAATAAATCTGCAAATCATATCCA

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
K24220 MYH1s; myosin heavy chain 1/2/3/4/8/13/7B/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568861.2 True 6030 mRNA 0.49 41 54792943 54805426

Neighbor

gene id symbol gene type direction distance location
slc26a6l LOC106565505 coding upstream 50580 54733063 ~ 54742363 (+)
iho1 ccdc36 coding upstream 75336 54713511 ~ 54717607 (+)
rereb NA coding upstream 115569 54663129 ~ 54677374 (+)
eno1b LOC106565361 coding upstream 130116 54653432 ~ 54662827 (+)
slc6a11a LOC106565359 coding upstream 170267 54592555 ~ 54622676 (+)
LOC110493217 LOC105909373 coding downstream 12908 54818334 ~ 54824057 (+)
kiaa1328 LOC106565370 coding downstream 20114 54825540 ~ 54865783 (+)
LOC110493220 LOC106565372 coding downstream 827781 55633207 ~ 55652540 (+)
cita LOC106565373 coding downstream 860418 55665844 ~ 55717514 (+)
LOC110494139 mlrv coding downstream 915937 55721363 ~ 55724608 (+)
G1464668 NA non-coding upstream 85607 54706970 ~ 54707336 (+)
G1464659 rnf223 non-coding upstream 97951 54691178 ~ 54694992 (+)
G1464641 LOC106565501 non-coding upstream 159406 54633094 ~ 54633537 (+)
G1464616 NA non-coding upstream 165528 54624324 ~ 54627415 (+)
G1464615 NA non-coding upstream 168735 54622806 ~ 54624208 (+)
G1465118 NA non-coding downstream 183613 54989039 ~ 54989364 (+)
G1465120 LOC100136012 non-coding downstream 184499 54989925 ~ 54990146 (+)
G1465162 NA non-coding downstream 211411 55016837 ~ 55017440 (+)
G1465176 NA non-coding downstream 222201 55027627 ~ 55027914 (+)
G1465224 NA non-coding downstream 257325 55062751 ~ 55062966 (+)
LOC110494110 LOC106565356 other upstream 318471 54471705 ~ 54474472 (+)
LOC110494100 LOC106565348 other upstream 528327 54256327 ~ 54264616 (+)
G1464092 LOC106565344 other upstream 603326 54147039 ~ 54189617 (+)
G1460249 LOC106565103 other upstream 3702054 51080132 ~ 51137770 (+)
LOC110494047 btg2 other upstream 3895499 50894903 ~ 50897444 (+)
G1466124 NA other downstream 1191222 55996648 ~ 55998347 (+)
G1466131 NA other downstream 1210151 56015577 ~ 56016613 (+)
LOC110494143 LOC106565389 other downstream 1282752 56088149 ~ 56127481 (+)
G1466224 gem other downstream 1413816 56219242 ~ 56220946 (+)
LOC110494160 LOC105017078 other downstream 1774965 56575737 ~ 56584088 (+)

Expression


Co-expression Network