LOC110494134 (LOC106565385)


Basic Information

Item Value
gene id LOC110494134
gene name LOC106565385
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 56030123 ~ 56039321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568904.2
AGCATGTGCCTAAAAAAACAAGTGCTTGACCCATCAACGAGAAGCGGAGATTCGTCAGTCAACAACTACGACGCCATCTTATTACtttaaggtagagagagacagagacagataggcaAGGTTGTCATCATAACTGGGAATTATGAGCGGAGCTAAAGGCCGCATCGACCCGCCTGTTGCTGCTGAGAATGTCTCGAGCGCCGGGCACAGTTCCGCGGCTCCTGCGCGGGAGCGCAAGCCAAGTGGAGGGGTTCTGAAGAGACTCAAGTCTCGGCGAAGCCAGGTTGATAGTAGGCCCGTCACAGAAGACCATCTGCGGACACAAGTTGGCCACATCACCCCTGAAGAGGTCCTAGGATTGCGGGTTGCTACACGGGAGGAAGACGAGGAGAATGGAGAGGGAGACATGAGTGCAGGACGTTTCGTACGCTACCAGTTCACAGCAGCATTCCTACAACTGAGGACAGTGGGAGCCACagtggAGTTTACAGTTGGCACACGGCCTCTGAACAGCTTCAGGATGATTGAGAGGCACTACTTCAGGGATCACCTCCTGAAGAGCTTTGACTTTGACTTCGGCTTCTGTATCCCAAACAGCCGCAATACTTGCGAACACATCTACGAGTTCCCTCAGCTGTCCGAGAGCTTGGTTTGTCAGATGGTGGAACATCCCTACGAGACGAGGTCAGACAGCTTCTACTTTGTTGACAACAGACTGGTCATGCACAACAAGGCAGACTACGCTTATAACGGGGGCAggcattgagtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgcgcgtgctgtGCCCAAGCCTATACTCACACCAGCAGACTCTCCCCCAAATGTGGATTACTGTAAGTTAAAAAAGCCTTTATTGTCATGGTATAGCTGTATAGTATGGAAAAGTTTAAAAACAGCAGGACAGAGCCGCATAGAGCCACATAGACTACTGGCAGTAGTATGGCAAAACTCTGCCAATAGTGCTTTCTCTGTACCACCAAAAGGAAGCAGGTTGAACCCCAATGATGTGTCTCAACTAACCAAATGGTTGATTTTAGTGTGTAGTTGGACAGTTGATGTACTGTGCACTCCTTGGCTTTTAAGGGAAAGCATATTCCCCACTTTTGTTGAACCATGAGAAGCACTAGTTTCCCACCAAATGCAGCTTTTTAGGAGTGAGTCATACCCGTAAAAGACCCAACAatgaccacacacacaggcagacaaacaatctttctctctttctctccctatttctatttctctctatcgTAACCTGCTGTGCTCAGGCCCACACTCCAGTCTGGAAATATAATTAAGATGGGAATGGGGAAGACATCcacgcactcacacactcactgtcAAATacacatgttgtgggggtgctttcctgcaggagggactggtgaacatcacaaaatagatggcatcatgaggaaataaaattatgtggatatattgatgc
>XM_021568902.2
GCATGTGCCTAAAAAAACAAGTGCTTGACCCATCAACGAGAAGCGGAGATTCGTCAGTCAACAACTACGACGCCATCTTATTACtttaaggtagagagagacagagacagataggcaAGGTTGTCATCATAACTGGGAATTATGAGCGGAGCTAAAGGCCGCATCGACCCGCCTGTTGCTGCTGAGAATGTCTCGAGCGCCGGGCACAGTTCCGCGGCTCCTGCGCGGGAGCGCAAGCCAAGTGGAGGGGTTCTGAAGAGACTCAAGTCTCGGCGAAGCCAGGTTGATAGTAGGCCCGTCACAGAAGACCATCTGCGGACACAAGTTGGCCACATCACCCCTGAAGAGGTCCTAGGATTGCGGGTTGCTACACGGGGGTACCTGTGTAAACCAGAGGACAACATCTTCAACATAGATTTCATTCGCTTTAAAATCAGAGACCTGGAGACAGAGACTGTGTTGTTTGAAATTGCCAAACCACCTCATACGGAGGAAGACGAGGAGAATGGAGAGGGAGACATGAGTGCAGGACGTTTCGTACGCTACCAGTTCACAGCAGCATTCCTACAACTGAGGACAGTGGGAGCCACagtggAGTTTACAGTTGGCACACGGCCTCTGAACAGCTTCAGGATGATTGAGAGGCACTACTTCAGGGATCACCTCCTGAAGAGCTTTGACTTTGACTTCGGCTTCTGTATCCCAAACAGCCGCAATACTTGCGAACACATCTACGAGTTCCCTCAGCTGTCCGAGAGCTTGGTTTGTCAGATGGTGGAACATCCCTACGAGACGAGGTCAGACAGCTTCTACTTTGTTGACAACAGACTGGTCATGCACAACAAGGCAGACTACGCTTATAACGGGGGCAggcattgagtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgcgcgtgctgtGCCCAAGCCTATACTCACACCAGCAGACTCTCCCCCAAATGTGGATTACTGTAAGTTAAAAAAGCCTTTATTGTCATGGTATAGCTGTATAGTATGGAAAAGTTTAAAAACAGCAGGACAGAGCCGCATAGAGCCACATAGACTACTGGCAGTAGTATGGCAAAACTCTGCCAATAGTGCTTTCTCTGTACCACCAAAAGGAAGCAGGTTGAACCCCAATGATGTGTCTCAACTAACCAAATGGTTGATTTTAGTGTGTAGTTGGACAGTTGATGTACTGTGCACTCCTTGGCTTTTAAGGGAAAGCATATTCCCCACTTTTGTTGAACCATGAGAAGCACTAGTTTCCCACCAAATGCAGCTTTTTAGGAGTGAGTCATACCCGTAAAAGACCCAACAatgaccacacacacaggcagacaaacaatctttctctctttctctccctatttctatttctctctatcgTAACCTGCTGTGCTCAGGCCCACACTCCAGTCTGGAAATATAATTAAGATGGGAATGGGGAAGACATCcacgcactcacacactcactgtcAAATacacatgttgtgggggtgctttcctgcaggagggactggtgaacatcacaaaatagatggcatcatgaggaaataaaattatgtggatatattgatgc

Function

NR:

description
protein unc-119 homolog B-like isoform X1

GO: NA

KEGG:

id description
K23539 UNC119; protein unc-119

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568904.2 False 1480 mRNA 0.49 4 56030123 56039321
XM_021568902.2 True 1593 mRNA 0.48 5 56030124 56039321

Neighbor

gene id symbol gene type direction distance location
LOC110493222 NA coding upstream 83536 55933572 ~ 55946587 (+)
LOC118940477 NA coding upstream 201254 55824599 ~ 55828869 (+)
LOC110494141 LOC106565378 coding upstream 211797 55811948 ~ 55819195 (+)
LOC118940664 NA coding upstream 240512 55789483 ~ 55789611 (+)
LOC118940663 NA coding upstream 241085 55788910 ~ 55789038 (+)
LOC110494131 LOC106565386 coding downstream 16970 56056291 ~ 56081057 (+)
LOC110494143 LOC106565389 coding downstream 48828 56088149 ~ 56127481 (+)
LOC110494144 LOC106565388 coding downstream 69061 56108382 ~ 56112085 (+)
LOC110494146 fam219a coding downstream 131288 56170609 ~ 56192396 (+)
zgc:109965 LOC106565507 coding downstream 153440 56192761 ~ 56202852 (+)
G1466124 NA non-coding upstream 31776 55996648 ~ 55998347 (+)
G1466121 LOC106565491 non-coding upstream 35949 55992417 ~ 55994174 (+)
G1466120 NA non-coding upstream 38896 55988451 ~ 55991227 (+)
G1466116 NA non-coding upstream 48192 55981494 ~ 55981931 (+)
G1466114 NA non-coding upstream 50864 55979022 ~ 55979259 (+)
G1466592 NA non-coding downstream 238824 56278145 ~ 56278451 (+)
G1466594 NA non-coding downstream 240135 56279456 ~ 56279858 (+)
G1466625 NA non-coding downstream 282693 56322014 ~ 56322229 (+)
LOC110494150 NA non-coding downstream 285270 56324591 ~ 56329073 (+)
G1466131 NA other upstream 13510 56015577 ~ 56016613 (+)
LOC110494110 LOC106565356 other upstream 1555651 54471705 ~ 54474472 (+)
LOC110494100 LOC106565348 other upstream 1765507 54256327 ~ 54264616 (+)
G1464092 LOC106565344 other upstream 1840506 54147039 ~ 54189617 (+)
G1466224 gem other downstream 179921 56219242 ~ 56220946 (+)
LOC110494160 LOC105017078 other downstream 541070 56575737 ~ 56584088 (+)
G1467020 NA other downstream 1078381 57117702 ~ 57118886 (+)
G1467030 NA other downstream 1107192 57146488 ~ 57147741 (+)

Expression


Co-expression Network