Item | Value |
---|---|
gene id | LOC118940478 |
gene name | LOC108432887 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 56700598 ~ 56722352 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
nuclear receptor subfamily 4 group A member 1-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005037020.1 | False | 1537 | mRNA | 0.49 | 3 | 56700598 | 56722352 |
TU1677727 | True | 507 | lncRNA | 0.50 | 2 | 56721551 | 56722289 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110494166 | nab2 | coding | upstream | 32744 | 56650088 ~ 56667854 (+) |
LOC110494163 | inpp | coding | upstream | 71591 | 56622540 ~ 56629007 (+) |
LOC110494162 | LOC106565402 | coding | upstream | 83220 | 56598405 ~ 56617378 (+) |
LOC110494159 | nrn1 | coding | upstream | 109007 | 56584859 ~ 56591591 (+) |
LOC110494160 | LOC105017078 | coding | upstream | 116510 | 56575737 ~ 56584088 (+) |
si:ch73-190f16.2 | LOC106583347 | coding | downstream | 94505 | 56816857 ~ 56831816 (+) |
LOC110494174 | LOC106565412 | coding | downstream | 141082 | 56863434 ~ 56871212 (+) |
syt6b | LOC106565416 | coding | downstream | 199343 | 56921695 ~ 56966874 (+) |
LOC110493225 | LOC106565493 | coding | downstream | 251070 | 56973422 ~ 56975836 (+) |
inavab | LOC106565419 | coding | downstream | 256210 | 56978562 ~ 57026958 (+) |
G1466787 | NA | non-coding | upstream | 29572 | 56668550 ~ 56671026 (+) |
G1466775 | NA | non-coding | upstream | 55874 | 56644514 ~ 56644724 (+) |
G1466742 | NA | non-coding | upstream | 140760 | 56559513 ~ 56559838 (+) |
G1466707 | NA | non-coding | upstream | 163853 | 56533668 ~ 56536745 (+) |
G1466708 | NA | non-coding | upstream | 194461 | 56494854 ~ 56506137 (+) |
G1466825 | NA | non-coding | downstream | 3752 | 56726104 ~ 56726343 (+) |
G1466833 | NA | non-coding | downstream | 12778 | 56735130 ~ 56735350 (+) |
G1466835 | NA | non-coding | downstream | 14998 | 56737350 ~ 56737753 (+) |
G1466848 | NA | non-coding | downstream | 42849 | 56765201 ~ 56765931 (+) |
G1466850 | LOC106565409 | non-coding | downstream | 46379 | 56768731 ~ 56772239 (+) |
G1466224 | gem | other | upstream | 479652 | 56219242 ~ 56220946 (+) |
LOC110494143 | LOC106565389 | other | upstream | 573117 | 56088149 ~ 56127481 (+) |
G1466131 | NA | other | upstream | 683985 | 56015577 ~ 56016613 (+) |
G1466124 | NA | other | upstream | 702424 | 55996648 ~ 55998347 (+) |
G1467020 | NA | other | downstream | 395350 | 57117702 ~ 57118886 (+) |
G1467030 | NA | other | downstream | 424161 | 57146488 ~ 57147741 (+) |
G1467031 | NA | other | downstream | 426951 | 57149303 ~ 57150343 (+) |
G1467159 | LOC106565433 | other | downstream | 756445 | 57478797 ~ 57554480 (+) |
LOC110494206 | LOC108254821 | other | downstream | 776030 | 57498305 ~ 57548178 (+) |
G1466791 | NA | non-coding | upstream | 5177 | 56715986 ~ 56716374 (+) |
G1466824 | NA | non-coding | upstream | 6772 | 56714555 ~ 56714779 (+) |