Item | Value |
---|---|
gene id | LOC110494193 |
gene name | LOC106565432 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 57357378 ~ 57460651 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
nck-associated protein 5-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021569022.2 | False | 5797 | mRNA | 0.56 | 13 | 57357378 | 57394993 |
XM_021569021.2 | False | 5591 | mRNA | 0.56 | 14 | 57357378 | 57460651 |
XM_021569023.2 | False | 5564 | mRNA | 0.56 | 14 | 57357378 | 57460651 |
XM_036950261.1 | True | 5567 | mRNA | 0.56 | 14 | 57357378 | 57460651 |
57,340,000
57,360,000
57,380,000
57,400,000
57,420,000
57,440,000
57,460,000
57,480,000
57,500,000
57,520,000
57,540,000
NC_048581.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110494192 | LOC106565510 | coding | downstream | 24384 | 57330121 ~ 57332994 (-) |
LOC118940479 | NA | coding | downstream | 48895 | 57294236 ~ 57308483 (-) |
hig1a | hig1a | coding | downstream | 123945 | 57229440 ~ 57233433 (-) |
stx16 | LOC106565427 | coding | downstream | 212082 | 57132997 ~ 57145296 (-) |
LOC110493226 | npepl1 | coding | downstream | 234671 | 57121443 ~ 57122707 (-) |
si:ch1073-456m8.1 | LOC106565433 | coding | upstream | 19813 | 57480464 ~ 57492399 (-) |
sarnp | LOC106565436 | coding | upstream | 89087 | 57549738 ~ 57617300 (-) |
LOC110494209 | LOC106565437 | coding | upstream | 160665 | 57621316 ~ 57636564 (-) |
LOC110494204 | LOC106565439 | coding | upstream | 209093 | 57669744 ~ 57679619 (-) |
mmp19 | LOC106565443 | coding | upstream | 325012 | 57785663 ~ 57790549 (-) |
G1467936 | NA | non-coding | downstream | 16817 | 57339303 ~ 57340561 (-) |
G1467934 | NA | non-coding | downstream | 22763 | 57334274 ~ 57334615 (-) |
G1467896 | LOC100196653 | non-coding | downstream | 27952 | 57325498 ~ 57329426 (-) |
G1467898 | NA | non-coding | downstream | 46695 | 57305842 ~ 57310683 (-) |
G1467831 | NA | non-coding | downstream | 182580 | 57174508 ~ 57174798 (-) |
G1468102 | NA | non-coding | upstream | 158458 | 57619109 ~ 57619323 (-) |
G1468124 | NA | non-coding | upstream | 193704 | 57654355 ~ 57662247 (-) |
G1468151 | NA | non-coding | upstream | 238806 | 57699457 ~ 57699820 (-) |
G1468158 | NA | non-coding | upstream | 251705 | 57712356 ~ 57712590 (-) |
G1468160 | NA | non-coding | upstream | 252367 | 57713018 ~ 57713248 (-) |
elmo2 | LOC106565399 | other | downstream | 857053 | 56494856 ~ 56530610 (-) |
dnai1.2 | dnai1 | other | downstream | 1190041 | 56130667 ~ 56167366 (-) |
LOC110494137 | LOC106565384 | other | downstream | 1386664 | 55954473 ~ 55971001 (-) |
G1464954 | NA | other | downstream | 2629483 | 54726796 ~ 54727895 (-) |
G1470802 | NA | other | upstream | 2213890 | 59674541 ~ 59676694 (-) |
LOC110494253 | LOC106565590 | other | upstream | 2530324 | 59990975 ~ 59999740 (-) |
LOC110494257 | LOC106565586 | other | upstream | 2646018 | 60104033 ~ 60110249 (-) |
G1471219 | srgap3 | other | upstream | 2915095 | 60375633 ~ 60376864 (-) |
G1471564 | NA | other | upstream | 3177529 | 60638180 ~ 60639335 (-) |